BLASTX nr result

ID: Cnidium21_contig00016041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016041
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534030.1| DELLA protein GAI, putative [Ricinus communi...   110   1e-22
gb|AFC88482.1| DELLA protein [Rosa lucieae]                           105   3e-21
gb|AFC88481.1| DELLA protein [Rosa lucieae]                           105   3e-21
gb|AGA16543.1| DELLA protein RGL2, partial [Sisymbrium officinale]    100   1e-19
gb|AEX97111.1| spur-type DELLA protein [Malus x domestica]            100   1e-19

>ref|XP_002534030.1| DELLA protein GAI, putative [Ricinus communis]
           gi|223525955|gb|EEF28350.1| DELLA protein GAI, putative
           [Ricinus communis]
          Length = 567

 Score =  110 bits (275), Expect = 1e-22
 Identities = 57/104 (54%), Positives = 72/104 (69%), Gaps = 15/104 (14%)
 Frame = +3

Query: 27  MDELLAVLGYKVRASDMTVIAKKLEQLEVAMGIDTVNGATQLSETTHYNPSDISNWVESM 206
           MDELLAVLGYKVR+SDM  +A+KLEQLE+ MGI   +G + LS+T HYNPSD+S WV+SM
Sbjct: 39  MDELLAVLGYKVRSSDMAEVAQKLEQLEMVMGIAQEDGISHLSDTVHYNPSDLSGWVQSM 98

Query: 207 LTELGP---------------SMSDTQSGLVHDNQNYDLRAIPG 293
           L+EL                 S  ++QSG+ +D+  YDLRAIPG
Sbjct: 99  LSELNNPLDTIQNQQDSSSVISFGNSQSGIFNDDSEYDLRAIPG 142


>gb|AFC88482.1| DELLA protein [Rosa lucieae]
          Length = 564

 Score =  105 bits (263), Expect = 3e-21
 Identities = 59/118 (50%), Positives = 75/118 (63%), Gaps = 21/118 (17%)
 Frame = +3

Query: 3   WIEDQPD-TMDELLAVLGYKVRASDMTVIAKKLEQLEVAMGIDTVNGATQLSETTHYNPS 179
           W E+Q   +MDELLAVLGYKVR+ DM  +A+KLEQLE+ MG    +G +QLS+T HYNPS
Sbjct: 29  WEEEQESGSMDELLAVLGYKVRSDDMADVAEKLEQLEMVMGSAQQDGISQLSDTVHYNPS 88

Query: 180 DISNWVESMLTELGPSMSD-------------------TQSGLVH-DNQNYDLRAIPG 293
           D+S W+++ML EL P   D                   TQS +++ DN  YDLRAIPG
Sbjct: 89  DLSGWLQTMLMELNPIDDDLSNSQQQKQKQKQKQKQIETQSRVIYDDNSEYDLRAIPG 146


>gb|AFC88481.1| DELLA protein [Rosa lucieae]
          Length = 562

 Score =  105 bits (263), Expect = 3e-21
 Identities = 57/114 (50%), Positives = 75/114 (65%), Gaps = 17/114 (14%)
 Frame = +3

Query: 3   WIEDQPD-TMDELLAVLGYKVRASDMTVIAKKLEQLEVAMGIDTVNGATQLSETTHYNPS 179
           W E+Q   +MDELLAVLGYKVR+ DM  +A+KLEQLE+ MG    +G +QLS+T HYNPS
Sbjct: 29  WEEEQESGSMDELLAVLGYKVRSDDMADVAEKLEQLEMVMGSAQQDGISQLSDTVHYNPS 88

Query: 180 DISNWVESMLTELGP---------------SMSDTQSGLVH-DNQNYDLRAIPG 293
           D+S W+++ML+EL P                  +TQ  +++ DN  YDLRAIPG
Sbjct: 89  DLSGWLQTMLSELNPIDDVLSNSQQQKQKQKQIETQPRVIYDDNSEYDLRAIPG 142


>gb|AGA16543.1| DELLA protein RGL2, partial [Sisymbrium officinale]
          Length = 533

 Score =  100 bits (250), Expect = 1e-19
 Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
 Frame = +3

Query: 27  MDELLAVLGYKVRASDMTVIAKKLEQLEVAMGIDTVNGATQLSETTHYNPSDISNWVESM 206
           MDELLAVLGYKVR+S+M  +A+KLEQLE+ +  D V G+T L++T HYNPSD+S WVESM
Sbjct: 23  MDELLAVLGYKVRSSEMAEVAQKLEQLEMVLSNDDV-GSTVLNDTVHYNPSDLSTWVESM 81

Query: 207 LTEL-GPSMSDTQ-SGLVHDNQNYDLRAIPG 293
           L+EL  P+ SD   + +  D   YDL AIPG
Sbjct: 82  LSELNNPASSDLDPTRICEDRSEYDLSAIPG 112


>gb|AEX97111.1| spur-type DELLA protein [Malus x domestica]
          Length = 584

 Score =  100 bits (249), Expect = 1e-19
 Identities = 59/126 (46%), Positives = 74/126 (58%), Gaps = 29/126 (23%)
 Frame = +3

Query: 3   WIEDQPD-----TMDELLAVLGYKVRASDMTVIAKKLEQLEVAMGIDTVNGATQLSETTH 167
           W +DQ        MDELLAVLGYKVR+ DM  +A+KLEQLE+ MG    +G +QLS+T H
Sbjct: 38  WEDDQDGYSAGGDMDELLAVLGYKVRSDDMADVAEKLEQLEMVMGSAQEDGISQLSDTVH 97

Query: 168 YNPSDISNWVESMLTELG-----PSMSD-------------------TQSGLVHDNQNYD 275
           YNPSD+S WV+SML+EL      PS+ D                    +S +  D+  YD
Sbjct: 98  YNPSDLSGWVQSMLSELNTGDDMPSIDDPLLAPAESSSITSMSFSNSQRSRVFSDDSEYD 157

Query: 276 LRAIPG 293
           LRAIPG
Sbjct: 158 LRAIPG 163


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