BLASTX nr result

ID: Cnidium21_contig00016029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016029
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002881221.1| hypothetical protein ARALYDRAFT_344996 [Arab...    76   3e-12
ref|XP_002889539.1| hypothetical protein ARALYDRAFT_470516 [Arab...    75   6e-12
ref|XP_002524173.1| conserved hypothetical protein [Ricinus comm...    75   6e-12
gb|AFK47881.1| unknown [Medicago truncatula]                           75   7e-12
ref|XP_003605892.1| Transmembrane protein [Medicago truncatula] ...    74   9e-12

>ref|XP_002881221.1| hypothetical protein ARALYDRAFT_344996 [Arabidopsis lyrata subsp.
           lyrata] gi|297327060|gb|EFH57480.1| hypothetical protein
           ARALYDRAFT_344996 [Arabidopsis lyrata subsp. lyrata]
          Length = 168

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
 Frame = -1

Query: 353 MGILMKLADAIXXXXXXXXXXXXXXTNAHVFLPSHYYLKYMIDS---FIRDKKHYLLLEK 183
           MG   KL DA+               ++ + LP   +  +++D    +I +   YL  EK
Sbjct: 1   MGAFCKLIDAVLFLYFALMAIVAPLIDSQISLPGDIFPAFLVDLNRWYIDEFGDYLAKEK 60

Query: 182 PDFFRALLYYHLLVNWPLAVISLYGFIFPKSWIRTTSLILAVSFASITVPVLGELVGSGK 3
           P F   L+++ LL+ WPL+++++Y  +  KSW  TTS++   S  +    +LGE+VGSGK
Sbjct: 61  PHFLVGLIWHELLLLWPLSIVNVYAILAGKSWFGTTSMVYGASVVTSMAAILGEMVGSGK 120


>ref|XP_002889539.1| hypothetical protein ARALYDRAFT_470516 [Arabidopsis lyrata subsp.
           lyrata] gi|297335381|gb|EFH65798.1| hypothetical protein
           ARALYDRAFT_470516 [Arabidopsis lyrata subsp. lyrata]
          Length = 168

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
 Frame = -1

Query: 353 MGILMKLADAIXXXXXXXXXXXXXXTNAHVFLPSHYYLKYMID---SFIRDKKHYLLLEK 183
           MG L KL D                 +    LPS  Y  ++ D    +I D   YLL+EK
Sbjct: 1   MGALGKLIDGALFVYFASMAIIAPLIDGQTSLPSGIYPAFLTDLKSKYIADFGDYLLMEK 60

Query: 182 PDFFRALLYYHLLVNWPLAVISLYGFIFPKSWIRTTSLILAVSFASITVPVLGELVGSGK 3
           P F   L+++ LL  WPL+V ++Y  +  KSW  TT L+   S  +    +LGE++GSGK
Sbjct: 61  PHFLVGLVWHELLFLWPLSVANVYAILAGKSWFGTTCLLYGASVVTSMAAILGEMIGSGK 120


>ref|XP_002524173.1| conserved hypothetical protein [Ricinus communis]
           gi|223536542|gb|EEF38188.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
 Frame = -1

Query: 353 MGILMKLADAIXXXXXXXXXXXXXXTNAHVFLPSHYYLKYMIDS---FIRDKKHYLLLEK 183
           MG  MKL D I               +A   LP   Y  ++I+    ++++   YL+ EK
Sbjct: 1   MGACMKLIDTILFFLFLVLAVAAPLMDAQAILPLKLYPDFLINFNNWYVKEHGDYLVAEK 60

Query: 182 PDFFRALLYYHLLVNWPLAVISLYGFIFPKSWIRTTSLILAVSFASITVPVLGELVGSGK 3
             FF  +++  LL  WPLA++++YG I  K W  TT LI   S  +  V ++ EL+GSG+
Sbjct: 61  TPFFVGIIWLELLFLWPLALLNMYGIIAAKPWFNTTCLIYGTSIFTSMVAIVAELIGSGR 120


>gb|AFK47881.1| unknown [Medicago truncatula]
          Length = 167

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
 Frame = -1

Query: 353 MGILMKLADAIXXXXXXXXXXXXXXTNAHVFLPSHYYLKYMIDS---FIRDKKHYLLLEK 183
           MGI +KL D                 +A   LP  Y+ + +++    +  +   YL+ EK
Sbjct: 1   MGIFLKLVDFTLFLFFLLITIVAPLIDAQTCLPLSYFPEILVNVKTWYTNEYDDYLVAEK 60

Query: 182 PDFFRALLYYHLLVNWPLAVISLYGFIFPKSWIRTTSLILAVSFASITVPVLGELVGSGK 3
           P FF  L++  LL  WPLAV+++Y  +  K W  TT LI  VS ++  V VL E++GS K
Sbjct: 61  PHFFVGLVWLELLFQWPLAVLNVYAILSSKGWFNTTCLIYGVSLSTSMVAVLSEMMGSKK 120


>ref|XP_003605892.1| Transmembrane protein [Medicago truncatula]
           gi|355506947|gb|AES88089.1| Transmembrane protein
           [Medicago truncatula]
          Length = 167

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
 Frame = -1

Query: 353 MGILMKLADAIXXXXXXXXXXXXXXTNAHVFLPSHYYLKYMIDS---FIRDKKHYLLLEK 183
           MGI +KL D                 +A   LP  Y+ + +++    +  +   YL+ EK
Sbjct: 1   MGIFLKLVDFTLFLFFLLITIVAPLIDAQTCLPLSYFPEILVNVKTWYTNEYGDYLVAEK 60

Query: 182 PDFFRALLYYHLLVNWPLAVISLYGFIFPKSWIRTTSLILAVSFASITVPVLGELVGSGK 3
           P FF  L++  LL  WPLAV+++Y  +  K W  TT LI  VS ++  V VL E++GS K
Sbjct: 61  PHFFVGLVWLELLFQWPLAVLNVYAILSSKGWFNTTCLIYGVSLSTSMVAVLSEMMGSKK 120


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