BLASTX nr result

ID: Cnidium21_contig00016005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016005
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC77075.1| hypothetical protein OsI_15473 [Oryza sativa Indi...   216   3e-54
ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   215   7e-54
gb|EEC82986.1| hypothetical protein OsI_28021 [Oryza sativa Indi...   215   7e-54
gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group]        215   7e-54
gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza...   214   9e-54

>gb|EEC77075.1| hypothetical protein OsI_15473 [Oryza sativa Indica Group]
          Length = 943

 Score =  216 bits (550), Expect = 3e-54
 Identities = 108/178 (60%), Positives = 134/178 (75%)
 Frame = +3

Query: 15   STVNCESLESMYPQEYLNSLRITGIPNHELELKIGAPIVLLRNLAPSKGLCNGTRLIITQ 194
            ST N  ++E++YP E+LN++R++G+P+H L+LK+G PI+LLRNL PSKGLCNGTRLI+TQ
Sbjct: 765  STTNRATIEALYPVEFLNTIRMSGLPDHCLQLKVGVPIMLLRNLNPSKGLCNGTRLIVTQ 824

Query: 195  LCARVIEGIIITGNHIGEKAFIPRISMRPTESTLPFSFKRVQFPVSLCYAMTINKSQGQT 374
            L  R+IEG IITG   G KA+IPRI    T+   PF  KR QFPV + YAMTINKSQGQT
Sbjct: 825  LTHRIIEGEIITGKAKGCKAYIPRIVTTSTDKKWPFKIKRRQFPVRVSYAMTINKSQGQT 884

Query: 375  LKSVGLYLPRPVFSHGQFYVAISRVTTPLGLYIVCEKESHPMAGMTKNVVYHEVFTNL 548
            L  VG+YLP PVFSHGQ YVA SRV +P GL ++ E  S   A  T+NVVY E+F +L
Sbjct: 885  LSRVGVYLPSPVFSHGQLYVAFSRVMSPDGLRVLIENNSPEHANNTQNVVYKEIFDDL 942


>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1427

 Score =  215 bits (547), Expect = 7e-54
 Identities = 110/181 (60%), Positives = 129/181 (71%)
 Frame = +3

Query: 6    ICKSTVNCESLESMYPQEYLNSLRITGIPNHELELKIGAPIVLLRNLAPSKGLCNGTRLI 185
            I K+T N    E MYP E+LNSL I G P H LELK G PI+LLRN+ P+ G+CNGTRLI
Sbjct: 1241 IDKTTDNISDQELMYPVEFLNSLNINGFPRHCLELKEGMPIMLLRNINPALGMCNGTRLI 1300

Query: 186  ITQLCARVIEGIIITGNHIGEKAFIPRISMRPTESTLPFSFKRVQFPVSLCYAMTINKSQ 365
            IT L  RVIE  IITG+++G K  IPRI +   +S  PF  +R QFP+ +CYAMTINKSQ
Sbjct: 1301 ITHLGERVIEAKIITGSNVGSKVLIPRIVLTSNDSKWPFLLRRRQFPIKVCYAMTINKSQ 1360

Query: 366  GQTLKSVGLYLPRPVFSHGQFYVAISRVTTPLGLYIVCEKESHPMAGMTKNVVYHEVFTN 545
            GQ+L  VGLYLPRPVFSHGQ YVA SRVT+P GL I+  +        TKNVVYHEVF+ 
Sbjct: 1361 GQSLNYVGLYLPRPVFSHGQLYVAFSRVTSPEGLKILIVERDENYVQYTKNVVYHEVFSG 1420

Query: 546  L 548
            L
Sbjct: 1421 L 1421


>gb|EEC82986.1| hypothetical protein OsI_28021 [Oryza sativa Indica Group]
          Length = 937

 Score =  215 bits (547), Expect = 7e-54
 Identities = 105/180 (58%), Positives = 132/180 (73%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3    SICKSTVNCESLESMYPQEYLNSLRITGIPNHELELKIGAPIVLLRNLAPSKGLCNGTRL 182
            ++C++T N   +E MYP E+LNSL   GIPNHEL+LK+G PI+LLRN+  + GLCNGTR+
Sbjct: 758  TVCRATTNNSDMEDMYPTEFLNSLSFPGIPNHELKLKVGLPIMLLRNINQAAGLCNGTRM 817

Query: 183  IITQLCARVIEGIIITGNHIGEKAFIPRISMRPTESTLPFSFKRVQFPVSLCYAMTINKS 362
             ITQL  + IE  IITG ++G+K +IPRI M P ES  PF  KR Q+PVS+C+AMTINKS
Sbjct: 818  TITQLGQKYIEAQIITGTNVGDKVYIPRIIMSPNESKWPFILKRRQYPVSVCFAMTINKS 877

Query: 363  QGQTLKSVGLYLPRPVFSHGQFYVAISRVTTPLGLYIVCEKES-HPMAGMTKNVVYHEVF 539
            QGQ+L  VGLYLP+ VF HGQ YVA SRVT   GL I+ + +S  P   M KN+VY E+F
Sbjct: 878  QGQSLNKVGLYLPKQVFCHGQLYVAFSRVTNRDGLKILIDDDSDRPNEDMAKNIVYKEIF 937


>gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group]
          Length = 1634

 Score =  215 bits (547), Expect = 7e-54
 Identities = 103/179 (57%), Positives = 130/179 (72%)
 Frame = +3

Query: 3    SICKSTVNCESLESMYPQEYLNSLRITGIPNHELELKIGAPIVLLRNLAPSKGLCNGTRL 182
            ++CK+T N    + +YP E+LNSL   G+PNH L+LK+G P++LLRN+  S GLCNGTR+
Sbjct: 1456 TVCKATTNDSETDVLYPTEFLNSLNFPGMPNHVLKLKVGLPVMLLRNINQSSGLCNGTRM 1515

Query: 183  IITQLCARVIEGIIITGNHIGEKAFIPRISMRPTESTLPFSFKRVQFPVSLCYAMTINKS 362
             ITQL  R IE  IITG H+GEK +IPRI M PTES  PF  KR Q+P+S+C+AMTINKS
Sbjct: 1516 TITQLGKRFIEAQIITGTHVGEKVYIPRIIMTPTESGWPFLLKRRQYPLSVCFAMTINKS 1575

Query: 363  QGQTLKSVGLYLPRPVFSHGQFYVAISRVTTPLGLYIVCEKESHPMAGMTKNVVYHEVF 539
            QGQ+L  VGLYLP+ VF+HGQ YVA SRVT   GL I+ +    P   M +N+VY E+F
Sbjct: 1576 QGQSLNMVGLYLPKQVFTHGQLYVAFSRVTRRDGLRIMLDDNESPGEHMVRNIVYKEIF 1634


>gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
            Group]
          Length = 1682

 Score =  214 bits (546), Expect = 9e-54
 Identities = 103/179 (57%), Positives = 130/179 (72%)
 Frame = +3

Query: 3    SICKSTVNCESLESMYPQEYLNSLRITGIPNHELELKIGAPIVLLRNLAPSKGLCNGTRL 182
            ++CK+T N    + +YP E+LNSL   G+PNH L+LK+G P++LLRN+  S GLCNGTR+
Sbjct: 1504 TVCKATTNDSETDVLYPTEFLNSLNFPGMPNHVLKLKLGLPVMLLRNINQSSGLCNGTRM 1563

Query: 183  IITQLCARVIEGIIITGNHIGEKAFIPRISMRPTESTLPFSFKRVQFPVSLCYAMTINKS 362
             ITQL  R IE  IITG H+GEK +IPRI M PTES  PF  KR Q+P+S+C+AMTINKS
Sbjct: 1564 TITQLGKRFIEAQIITGTHVGEKVYIPRIIMTPTESGWPFLLKRRQYPLSVCFAMTINKS 1623

Query: 363  QGQTLKSVGLYLPRPVFSHGQFYVAISRVTTPLGLYIVCEKESHPMAGMTKNVVYHEVF 539
            QGQ+L  VGLYLP+ VF+HGQ YVA SRVT   GL I+ +    P   M +N+VY E+F
Sbjct: 1624 QGQSLNMVGLYLPKQVFTHGQLYVAFSRVTRRDGLRIMLDDNESPGEHMVRNIVYKEIF 1682


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