BLASTX nr result
ID: Cnidium21_contig00016001
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00016001 (411 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264308.1| PREDICTED: KH domain-containing protein At2g... 108 6e-22 emb|CAN61397.1| hypothetical protein VITISV_015779 [Vitis vinifera] 107 8e-22 ref|XP_002268790.1| PREDICTED: KH domain-containing protein At2g... 107 1e-21 ref|XP_002533340.1| nucleic acid binding protein, putative [Rici... 106 2e-21 ref|XP_003534621.1| PREDICTED: KH domain-containing protein At2g... 104 8e-21 >ref|XP_002264308.1| PREDICTED: KH domain-containing protein At2g38610 [Vitis vinifera] gi|297745739|emb|CBI15795.3| unnamed protein product [Vitis vinifera] Length = 281 Score = 108 bits (269), Expect = 6e-22 Identities = 55/87 (63%), Positives = 66/87 (75%) Frame = +2 Query: 149 MSSFYNHNLSFSPARTASPHITTNPDADSTQQYLSELLQERQKLVPFMQVLPICTQLLNQ 328 MS Y N FS AR SPHI T PD +S QYL+ELL E QKLVPFMQVLP+C++LLNQ Sbjct: 1 MSGLYTQN--FSSARALSPHIRTAPDVES--QYLTELLAEYQKLVPFMQVLPVCSRLLNQ 56 Query: 329 EILKLSRLIPNQSFTDYDLMQRGSPNP 409 EIL++S +IP Q F D+D +QRGSP+P Sbjct: 57 EILRVSSMIPKQGFGDFDRLQRGSPSP 83 >emb|CAN61397.1| hypothetical protein VITISV_015779 [Vitis vinifera] Length = 281 Score = 107 bits (268), Expect = 8e-22 Identities = 55/87 (63%), Positives = 66/87 (75%) Frame = +2 Query: 149 MSSFYNHNLSFSPARTASPHITTNPDADSTQQYLSELLQERQKLVPFMQVLPICTQLLNQ 328 MS Y N FS AR SPHI T PD +S QYL+ELL E QKLVPFMQVLP+C++LLNQ Sbjct: 1 MSGLYTQN--FSSARALSPHIRTAPDVES--QYLTELLAEYQKLVPFMQVLPVCSRLLNQ 56 Query: 329 EILKLSRLIPNQSFTDYDLMQRGSPNP 409 EIL++S +IP Q F D+D +QRGSP+P Sbjct: 57 EILRVSGMIPKQGFGDFDRLQRGSPSP 83 >ref|XP_002268790.1| PREDICTED: KH domain-containing protein At2g38610 [Vitis vinifera] gi|296085835|emb|CBI31159.3| unnamed protein product [Vitis vinifera] Length = 281 Score = 107 bits (267), Expect = 1e-21 Identities = 55/87 (63%), Positives = 65/87 (74%) Frame = +2 Query: 149 MSSFYNHNLSFSPARTASPHITTNPDADSTQQYLSELLQERQKLVPFMQVLPICTQLLNQ 328 MS YNHN FSPAR SP I + PD DS QYLSELL E QKL PFMQVLPIC++LLNQ Sbjct: 1 MSGLYNHN--FSPARAVSPQIRSTPDVDS--QYLSELLAEHQKLGPFMQVLPICSRLLNQ 56 Query: 329 EILKLSRLIPNQSFTDYDLMQRGSPNP 409 EI+++S +I NQ F D+D +Q SP+P Sbjct: 57 EIIRVSGMISNQGFGDFDRLQHRSPSP 83 >ref|XP_002533340.1| nucleic acid binding protein, putative [Ricinus communis] gi|223526820|gb|EEF29039.1| nucleic acid binding protein, putative [Ricinus communis] Length = 274 Score = 106 bits (264), Expect = 2e-21 Identities = 52/78 (66%), Positives = 64/78 (82%) Frame = +2 Query: 176 SFSPARTASPHITTNPDADSTQQYLSELLQERQKLVPFMQVLPICTQLLNQEILKLSRLI 355 +FSPAR SPHI T PD DS Q YL+ELL+E QKL PF QVLPIC++LLNQEIL++S +I Sbjct: 1 NFSPARALSPHIRTTPDVDSGQ-YLTELLEEHQKLGPFNQVLPICSRLLNQEILRVSGMI 59 Query: 356 PNQSFTDYDLMQRGSPNP 409 PNQ F+D+D +QRGS +P Sbjct: 60 PNQGFSDFDRLQRGSLSP 77 >ref|XP_003534621.1| PREDICTED: KH domain-containing protein At2g38610-like [Glycine max] Length = 281 Score = 104 bits (259), Expect = 8e-21 Identities = 54/87 (62%), Positives = 66/87 (75%) Frame = +2 Query: 149 MSSFYNHNLSFSPARTASPHITTNPDADSTQQYLSELLQERQKLVPFMQVLPICTQLLNQ 328 MS YN N FSPAR ASP I +NP+ DS QYLSELL E QKL PFMQVLPIC++LLNQ Sbjct: 1 MSGLYNPN--FSPARAASPQIRSNPEVDS--QYLSELLAEHQKLGPFMQVLPICSRLLNQ 56 Query: 329 EILKLSRLIPNQSFTDYDLMQRGSPNP 409 EIL++S ++ NQ F D+D ++ SP+P Sbjct: 57 EILRVSGMLSNQGFGDFDRLRHRSPSP 83