BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015981
         (1204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   182   1e-43
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   137   7e-30
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   135   2e-29
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   134   4e-29
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A...   134   6e-29

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  182 bits (463), Expect = 1e-43
 Identities = 95/257 (36%), Positives = 144/257 (56%), Gaps = 2/257 (0%)
 Frame = -1

Query: 766 ITGRLYSWTSILLSLAGRLQLIKAVLFSIQAYWSKHFMLPSAVHKQLQTYFTRFLWKGDP 587
           IT ++  WT   LS AGR+QLI +VLFSIQ YW+  F+LP  V K ++     FLW G  
Sbjct: 80  ITSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSD 139

Query: 586 SVKGGAKVS*QNVCVPQIEGGLGIKNMVDWNKAQIMLHLFKVVSKSN-NLWPTWINQTIL 410
               GAKV+   VC+P+ EGGLGIK++ +WNK  ++ H++ + + S+ ++W TWI   +L
Sbjct: 140 MRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLL 199

Query: 409 KRKNFWVLAEPTDCSWIWRSVLKFRRVAQRYLFFKLGNGLDTSL*FDPWWNSQCLAIHRT 230
           + +NFW +  P +CSW W  +LK R +A   + + +G+G+ TSL FD W     LA    
Sbjct: 200 RGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYG 259

Query: 229 DTIIAQSGLSLNASVNVLINSGNWCLPRPN-IRHHHINAAFSLLLQQFNSPDFDLNKRDD 53
           +  I  SG++ NA VNVLI +  W  P    I  H I  A        ++ +  + ++D+
Sbjct: 260 ERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIP------SNSNPKMGQKDE 313

Query: 52  ILWNGVPLRKLKTWHIW 2
           ++W   P  +      W
Sbjct: 314 LVWLDSPNHRFSVKVAW 330


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  137 bits (344), Expect = 7e-30
 Identities = 79/229 (34%), Positives = 119/229 (51%)
 Frame = -1

Query: 766  ITGRLYSWTSILLSLAGRLQLIKAVLFSIQAYWSKHFMLPSAVHKQLQTYFTRFLWKGDP 587
            I  R   W +  LS AGRLQLI +V++S   +W   F+LP    K ++    RFLW  D 
Sbjct: 785  IAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLWGNDI 844

Query: 586  SVKGGAKVS*QNVCVPQIEGGLGIKNMVDWNKAQIMLHLFKVVSKSNNLWPTWINQTILK 407
            + +G  KVS QN C+P+ EGGLG++N   WNK   +  ++ + ++ ++LW  W +   L+
Sbjct: 845  TRRGDIKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANRLR 904

Query: 406  RKNFWVLAEPTDCSWIWRSVLKFRRVAQRYLFFKLGNGLDTSL*FDPWWNSQCLAIHRTD 227
              NFW     +  SWIW+++L  R +A+R+L   +GNG   S  +D W N   L      
Sbjct: 905  HVNFWNAEAASHHSWIWKAILGLRPLAKRFLRGAVGNGQLLSYWYDHWSNLGPLIEAIGA 964

Query: 226  TIIAQSGLSLNASVNVLINSGNWCLPRPNIRHHHINAAFSLLLQQFNSP 80
            +    +G+  +A V    +S  W LP    R+  +    S LL   NSP
Sbjct: 965  SGPQLTGIHESAVVTEASSSTGWILPSARTRNASLANLRSTLL---NSP 1010


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  135 bits (341), Expect = 2e-29
 Identities = 84/258 (32%), Positives = 129/258 (50%), Gaps = 8/258 (3%)
 Frame = -1

Query: 757  RLYSWTSILLSLAGRLQLIKAVLFSIQAYWSKHFMLPSAVHKQLQTYFTRFLWKGDPSVK 578
            R+ SWTS  LS AGRL LI +VL+SI  +W   F LP    ++L+   + FLW G     
Sbjct: 796  RIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNS 855

Query: 577  GGAKVS*QNVCVPQIEGGLGIKNMVDWNKAQIMLHLFKVVSKSNNLWPTWINQTILKRKN 398
              AK+S   VC P+ EGGLG++++ + N    +  ++K+VS SN+LW  W++Q +L+  +
Sbjct: 856  NKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNAS 915

Query: 397  FWVLAEP-TDCSWIWRSVLKFRRVAQRYLFFKLGNGLDTSL*FDPWWNSQCLAIHRTDTI 221
            FW + +  +  SWIW+ +LK+R VA+     ++GNG  TS  +D W +   L     D  
Sbjct: 916  FWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGNGKQTSFWYDNWSDLGQLLERTGDRG 975

Query: 220  IAQSGLSLNASVNVLINSGNWCLPRPNIRHHHINAAFSLLLQQF-NSPDFDLNKRDDILW 44
            +   G+S   +V        W   R   +  H N  ++++      S D      D +LW
Sbjct: 976  LIDLGISRRMTVEEA-----WTNRR---QRRHRNDVYNVIEDALKKSWDTRTETEDKVLW 1027

Query: 43   NG------VPLRKLKTWH 8
             G             TWH
Sbjct: 1028 RGKSDVFRTTFSTRDTWH 1045


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  134 bits (338), Expect = 4e-29
 Identities = 78/244 (31%), Positives = 126/244 (51%), Gaps = 1/244 (0%)
 Frame = -1

Query: 766 ITGRLYSWTSILLSLAGRLQLIKAVLFSIQAYWSKHFMLPSAVHKQLQTYFTRFLWKGDP 587
           I  R+ +WTS  LS AGRL LI +VL+S   +W   F LPSA  K++ +  + FLW G  
Sbjct: 198 IRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSGPE 257

Query: 586 SVKGGAKVS*QNVCVPQIEGGLGIKNMVDWNKAQIMLHLFKVVSKSNNLWPTWINQTILK 407
             +  AKVS  ++C P+ EGGLG++++ + N   ++  +++V S  ++LW  W    +LK
Sbjct: 258 LHRRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLK 317

Query: 406 RKNFWVLAEPTDC-SWIWRSVLKFRRVAQRYLFFKLGNGLDTSL*FDPWWNSQCLAIHRT 230
           +++FW L   +   SW+W+ +LK+R  A+ +   ++ NG  TS  FD W        H  
Sbjct: 318 QESFWSLTPNSSLGSWMWKKMLKYRETAKPFSRVEVNNGARTSFWFDNWSGMG----HLM 373

Query: 229 DTIIAQSGLSLNASVNVLINSGNWCLPRPNIRHHHINAAFSLLLQQFNSPDFDLNKRDDI 50
           D    +  + L  S N  +        R   R   +N   + L Q++ +   +L + D  
Sbjct: 374 DVTGQRGQIDLGISRNKTVAEAWSNRRRRKHRTEQLNDIEAALNQKYQTR--NLLREDAT 431

Query: 49  LWNG 38
           LW G
Sbjct: 432 LWRG 435


>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
           [Cucumis sativus]
          Length = 647

 Score =  134 bits (336), Expect = 6e-29
 Identities = 70/204 (34%), Positives = 112/204 (54%), Gaps = 1/204 (0%)
 Frame = -1

Query: 766 ITGRLYSWTSILLSLAGRLQLIKAVLFSIQAYWSKHFMLPSAVHKQLQTYFTRFLWKGDP 587
           IT R+ SW++ +LS A  LQL++ VL S+Q YW+  FMLP  VHK +      +LW+G  
Sbjct: 245 ITSRIRSWSARVLSFASSLQLVRLVLRSLQVYWASVFMLPMKVHKDVDKILRSYLWRGKE 304

Query: 586 SVKGGAKVS*QNVCVPQIEGGLGIKNMVDWNKAQIMLHLFKVVSKSNNLWPTWINQTILK 407
             +GGAKV+   VC+P  EGGL I +   WNKA  +  L+ ++ KS +LW  W+   ILK
Sbjct: 305 EGRGGAKVAWDEVCLPFDEGGLAICDGSSWNKASTLKILWLLLVKSGSLWVAWVEAYILK 364

Query: 406 RKNFWVLAEPTDCSWIWRSVLKFRRVAQRYLFFKLGNGLDTSL*FDPWWNSQCLAIHRTD 227
            ++ W +      SW +R++L+ R + + ++  KLGN     +  D W     +     +
Sbjct: 365 GRSLWEIDAGAGRSWCFRAILRKRDILKAHVEMKLGNVRKCRMLLDAWIQGGMIIQLFGE 424

Query: 226 TIIAQSGLSLNAS-VNVLINSGNW 158
            +I  +G   +A  ++ +   G+W
Sbjct: 425 RVIYDAGSRRDARLMDFMGGDGDW 448