BLASTX nr result
ID: Cnidium21_contig00015958
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00015958
(1149 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322271.1| f-box family protein [Populus trichocarpa] g... 214 3e-53
ref|XP_002283895.2| PREDICTED: F-box/LRR-repeat protein At5g6352... 212 1e-52
emb|CAN79767.1| hypothetical protein VITISV_019403 [Vitis vinifera] 211 4e-52
gb|ABK94267.1| unknown [Populus trichocarpa] 208 2e-51
ref|XP_002318743.1| predicted protein [Populus trichocarpa] gi|2... 197 3e-48
>ref|XP_002322271.1| f-box family protein [Populus trichocarpa]
gi|222869267|gb|EEF06398.1| f-box family protein [Populus
trichocarpa]
Length = 533
Score = 214 bits (545), Expect = 3e-53
Identities = 126/314 (40%), Positives = 185/314 (58%), Gaps = 4/314 (1%)
Frame = +3
Query: 6 LLQNMDYSVSPETVIVGDRCGEFLCGVDLINKKSYRKNQPLSVAAVTLLFMRQRKKPYGI 185
+++ +D+++S +T+I+GD +FL + ++ Y ++ S AAV L+F R R KP G
Sbjct: 224 VMEKLDHAMSSDTIIIGDERAQFLYRNGVESRNDYESSEYFS-AAVALVFARDRDKPCGT 282
Query: 186 GEIKLHVALSAGLAPIGNSYEVTSVKENIVGVSWTNGLTRLTARREESKENLDGQIITTH 365
GEI+ H ALS+G++ +G Y+ SVK+ + G T T LTARRE E DGQ I
Sbjct: 283 GEIQFHAALSSGVSAVGPRYKAVSVKKIVSGTGHT---TWLTARREGEHEIQDGQRILDD 339
Query: 366 IYRDLWDQIQYP-AFIGVVKRGKCDVGLEKEKRIASLVFYEVHGSDQRCLFVDGDGIKTG 542
I +L +Q+ +P +IGV ++ +C +G +K + + LVF+ V G DQ LF DG GI+TG
Sbjct: 340 INNELVNQVGHPDLYIGVTEQRRCFIGSQKSRVMTFLVFHGVMGGDQEYLFADGVGIRTG 399
Query: 543 DCFRIFQPDTHMALSSLRHVYDKFRDLKNRCDVGSSDCLTNRAATSR--RNKIFGAFIFS 716
D F+ + PD ALSS +V FR+L D S +CL R ++ G F+FS
Sbjct: 400 DYFQFYHPDPSAALSSCSNVSKNFRNL--NLDWSSRNCLHARGVYDNVCNKELVGGFVFS 457
Query: 717 SITRGEPIGEASSVASSPFLETFPDVTLAGSCCTGEICRGDS-SSYGQVSEQGFYRCCVH 893
RGE E +V SSPFL+ FP +AG C GEI RG S + + E+ CC+H
Sbjct: 458 CCGRGESFFERCNVDSSPFLDNFPGFPMAGIFCRGEIGRGFSVFNADEGQEERTSHCCLH 517
Query: 894 YHSSVYLVMSYTPS 935
+S+VYL++SYTP+
Sbjct: 518 VYSAVYLLVSYTPA 531
>ref|XP_002283895.2| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Vitis vinifera]
gi|297734433|emb|CBI15680.3| unnamed protein product
[Vitis vinifera]
Length = 527
Score = 212 bits (540), Expect = 1e-52
Identities = 131/315 (41%), Positives = 184/315 (58%), Gaps = 5/315 (1%)
Frame = +3
Query: 6 LLQNMDYSVSPETVIVGDRCGEFL--CGVDLINKKSYRKNQPLSVAAVTLLFMRQRKKPY 179
+L+ MDY++S ETVI+G+ G F+ G D N KN S V L+F R KP
Sbjct: 215 VLEKMDYAMSMETVILGEESGHFMYRSGDDSRNISGSLKN---SCDGVALVFARDNDKPQ 271
Query: 180 GIGEIKLHVALSAGLAPIGNSYEVTSVKENIVGVSWTNGLTRLTARREESKENLDGQIIT 359
G+GE + HVALS G+ P+G +++ SVK G + T LTAR+E KE LDG+ +
Sbjct: 272 GVGETQFHVALSTGVVPVGPTHKAASVKVKGDG---SERSTWLTARKEGLKEALDGERLL 328
Query: 360 THIYRDLWDQ-IQYPAFIGVVKRGKCDVGLEKEKRIASLVFYEVHGSDQRCLFVDGDGIK 536
IY ++ ++ + +IGV KR KC +G EK + + +L F++V G D+ LFVDG GIK
Sbjct: 329 HDIYDEMENENASHDLYIGVTKRRKCSIGSEKVRWVTTLEFHDVLGGDEEYLFVDGVGIK 388
Query: 537 TGDCFRIFQPDTHMALSSLRHVYDKFRDLKNRCDVGSSDCLTNRAATSRRNKIFGAFIFS 716
TGD FR ++ D+ ALSS RHV ++FR+LK +S A + ++ G IFS
Sbjct: 389 TGDPFRFYRSDSDTALSSCRHVSEEFRNLKQAWTHKNSYHFRGVADGGDKTEVCGGIIFS 448
Query: 717 SITRGEPIGEASSVASSPFLETFPDVTLAGSCCTGEICRG--DSSSYGQVSEQGFYRCCV 890
RG+ ++V SSPFLE FP LAG C GEI R S+ + E+ R +
Sbjct: 449 CYGRGDSFFGQANVDSSPFLENFPGFPLAGIMCGGEIGRVHLSSADHQGGQEESSPRSYL 508
Query: 891 HYHSSVYLVMSYTPS 935
HY+S+VYLV+S+TPS
Sbjct: 509 HYYSTVYLVISHTPS 523
>emb|CAN79767.1| hypothetical protein VITISV_019403 [Vitis vinifera]
Length = 527
Score = 211 bits (536), Expect = 4e-52
Identities = 131/315 (41%), Positives = 183/315 (58%), Gaps = 5/315 (1%)
Frame = +3
Query: 6 LLQNMDYSVSPETVIVGDRCGEFL--CGVDLINKKSYRKNQPLSVAAVTLLFMRQRKKPY 179
+L+ MDY++S ETVI+G+ G F+ G D N KN S V L+F R KP
Sbjct: 215 VLEKMDYAMSMETVILGEESGHFMYRSGDDSRNISGSLKN---SCDGVALVFARDNDKPQ 271
Query: 180 GIGEIKLHVALSAGLAPIGNSYEVTSVKENIVGVSWTNGLTRLTARREESKENLDGQIIT 359
G+GE + HVALS G+ P+G + + SVK G + T LTAR+E KE LDG+ +
Sbjct: 272 GVGESQFHVALSTGVVPVGPTLKAASVKVKGDG---SERSTWLTARKEGLKEALDGERLL 328
Query: 360 THIYRDLWDQ-IQYPAFIGVVKRGKCDVGLEKEKRIASLVFYEVHGSDQRCLFVDGDGIK 536
IY ++ ++ + +IGV KR KC +G EK + + +L F++V G D+ LFVDG GIK
Sbjct: 329 HDIYDEMENENASHDLYIGVTKRRKCSIGSEKVRWVTTLEFHDVLGGDEEYLFVDGVGIK 388
Query: 537 TGDCFRIFQPDTHMALSSLRHVYDKFRDLKNRCDVGSSDCLTNRAATSRRNKIFGAFIFS 716
TGD FR ++ D+ ALSS RHV ++FR+LK +S A + ++ G IFS
Sbjct: 389 TGDPFRFYRSDSDTALSSCRHVSEEFRNLKQAWTHKNSYHFRGVADGGDKTEVCGGIIFS 448
Query: 717 SITRGEPIGEASSVASSPFLETFPDVTLAGSCCTGEICRG--DSSSYGQVSEQGFYRCCV 890
RG+ ++V SSPFLE FP LAG C GEI R S+ + E+ R +
Sbjct: 449 CYGRGDSFFGQANVDSSPFLENFPGFPLAGIMCGGEIGRVHLSSADHQGGQEESSPRSYL 508
Query: 891 HYHSSVYLVMSYTPS 935
HY+S+VYLV+S+TPS
Sbjct: 509 HYYSTVYLVISHTPS 523
>gb|ABK94267.1| unknown [Populus trichocarpa]
Length = 342
Score = 208 bits (529), Expect = 2e-51
Identities = 131/313 (41%), Positives = 185/313 (59%), Gaps = 3/313 (0%)
Frame = +3
Query: 6 LLQNMDYSVSPETVIVGDRCGEFLCGVDLINKKSYRKNQPLSVAAVTLLFMRQRKKPYGI 185
+++ +D+++S +TVIVGD +FL + ++ Y ++ AAV L+F R R KP G
Sbjct: 32 VMEKLDHAMSRDTVIVGDERAQFLYRSGVESRNDYGSSEYFP-AAVALVFARDRDKPCGT 90
Query: 186 GEIKLHVALSAGLAPIGNSYEVTSVKENIVGVSWTNGLTRLTARREESKENLDGQIITTH 365
GEI+ H ALS+G++ IG Y+ SV++ +G S T T LTARRE +E DGQ I
Sbjct: 91 GEIQFHAALSSGVSAIGPRYKAVSVRK--IG-SETGCTTLLTARREGEQEIQDGQRILDD 147
Query: 366 IYRDLWDQIQYP-AFIGVVKRGKCDVGLEKEKRIASLVFYEVHGSDQRCLFVDGDGIKTG 542
I +L +QI P +IGV ++ KC +G EK + + LVF+ V G DQ LF DG GI+TG
Sbjct: 148 INNELVNQIGRPDLYIGVTEQRKCFIGSEKSRVMTFLVFHGVMGGDQEYLFADGVGIRTG 207
Query: 543 DCFRIFQPDTHMALSSLRHVYDKFRDLKNRCDVGSSDCLTNRAATSRRNK-IFGAFIFSS 719
D F+ + D ALSS V FR LK D S +CL + + +K + G F+FS
Sbjct: 208 DYFQFYHSDPTTALSSCNEVSKNFRKLK--LDWSSRNCLQAGVSDNVCSKELVGGFVFSC 265
Query: 720 ITRGEPIGEASSVASSPFLETFPDVTLAGSCCTGEICRGDS-SSYGQVSEQGFYRCCVHY 896
RGE E +V SSPFL+ FP V +AG C GEI RG S + + E+ CC+H
Sbjct: 266 CGRGESFFERCNVDSSPFLDNFPGVPMAGVFCRGEIGRGFSVLNADEGPEERTLHCCLHV 325
Query: 897 HSSVYLVMSYTPS 935
+S+ YL++SYTP+
Sbjct: 326 YSTAYLLVSYTPA 338
>ref|XP_002318743.1| predicted protein [Populus trichocarpa] gi|222859416|gb|EEE96963.1|
predicted protein [Populus trichocarpa]
Length = 551
Score = 197 bits (502), Expect = 3e-48
Identities = 132/334 (39%), Positives = 186/334 (55%), Gaps = 24/334 (7%)
Frame = +3
Query: 6 LLQNMDYSVSPETVIVGDRCGEFLCGVDLINKKSYRKNQPLSVAAVTLLFMRQRKKPYGI 185
+++ +D+++S +TVIVGD +FL + ++ Y ++ AAV L+F R R KP GI
Sbjct: 220 VMEKLDHAMSRDTVIVGDERAQFLYRSGVESRNDYGSSEYFP-AAVALVFARDRDKPCGI 278
Query: 186 G---------------------EIKLHVALSAGLAPIGNSYEVTSVKENIVGVSWTNGLT 302
G EI+ H ALS+G++ IG Y+ SV++ +G S T T
Sbjct: 279 GLLISVFAISSFATKMDWQCTGEIQFHAALSSGVSAIGPRYKAVSVRK--IG-SETGCTT 335
Query: 303 RLTARREESKENLDGQIITTHIYRDLWDQIQYP-AFIGVVKRGKCDVGLEKEKRIASLVF 479
LTARRE +E DGQ I I +L +QI P +IGV ++ KC +G EK + + LVF
Sbjct: 336 LLTARREGEQEIQDGQRILDDINNELVNQIGRPDLYIGVTEQRKCFIGSEKSRVMTFLVF 395
Query: 480 YEVHGSDQRCLFVDGDGIKTGDCFRIFQPDTHMALSSLRHVYDKFRDLKNRCDVGSSDCL 659
+ V G DQ LF DG GI+TGD F+ + D ALSS V FR LK D S +CL
Sbjct: 396 HGVMGGDQEYLFADGVGIRTGDYFQFYHSDPTTALSSCNEVSKNFRKLK--LDWSSRNCL 453
Query: 660 TNRAATSRRNK-IFGAFIFSSITRGEPIGEASSVASSPFLETFPDVTLAGSCCTGEICRG 836
+ + +K + G F+FS RGE E +V SSPFL+ FP V +AG C GEI RG
Sbjct: 454 QAGVSDNVCSKELVGGFVFSCCGRGESFFERCNVDSSPFLDNFPGVPMAGVFCRGEIGRG 513
Query: 837 DS-SSYGQVSEQGFYRCCVHYHSSVYLVMSYTPS 935
S + + E+ CC+H +S+ YL++SYTP+
Sbjct: 514 FSVLNADEGPEERTLHCCLHVYSTAYLLVSYTPA 547