BLASTX nr result

ID: Cnidium21_contig00015939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015939
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD65094.1| myb family transcription factor [Brassica oleracea]    132   4e-29
gb|ADL36775.1| MYBR domain class transcription factor [Malus x d...   126   2e-27
dbj|BAJ34014.1| unnamed protein product [Thellungiella halophila]     125   4e-27
ref|NP_001237520.1| MYB transcription factor MYB93 [Glycine max]...   123   1e-26
ref|XP_002865122.1| myb family transcription factor [Arabidopsis...   122   2e-26

>gb|ABD65094.1| myb family transcription factor [Brassica oleracea]
          Length = 359

 Score =  132 bits (331), Expect = 4e-29
 Identities = 67/88 (76%), Positives = 76/88 (86%), Gaps = 2/88 (2%)
 Frame = -1

Query: 258 TCPNRGVKLFGVRLTDGSSIRKSASMGNLTHFSGSNLTQLHNPAGNDSPG--GDTPDHGA 85
           TCPNRGVKLFGVRLT+GS IRKSASMGNL+H+SGS L+ L    G+++PG  GD  DHG 
Sbjct: 17  TCPNRGVKLFGVRLTEGS-IRKSASMGNLSHYSGSGLSGLGG-TGSNNPGSPGDGHDHGV 74

Query: 84  GDGYASEDFVPGSASSRERKRGNPWTEE 1
           GDGYASEDFVPGS+SSRERK+GNPWTEE
Sbjct: 75  GDGYASEDFVPGSSSSRERKKGNPWTEE 102


>gb|ADL36775.1| MYBR domain class transcription factor [Malus x domestica]
          Length = 328

 Score =  126 bits (316), Expect = 2e-27
 Identities = 65/86 (75%), Positives = 69/86 (80%)
 Frame = -1

Query: 258 TCPNRGVKLFGVRLTDGSSIRKSASMGNLTHFSGSNLTQLHNPAGNDSPGGDTPDHGAGD 79
           TCPNRGVKLFGVRLTDGS IRKSASMGNLTH++GS    L  P   DSPG  T DH A D
Sbjct: 17  TCPNRGVKLFGVRLTDGS-IRKSASMGNLTHYAGSGSGLL--PNNPDSPGDTTNDHAAAD 73

Query: 78  GYASEDFVPGSASSRERKRGNPWTEE 1
           GYASED VPGS+SSRERK+G PWTEE
Sbjct: 74  GYASEDCVPGSSSSRERKKGTPWTEE 99


>dbj|BAJ34014.1| unnamed protein product [Thellungiella halophila]
          Length = 367

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/88 (72%), Positives = 74/88 (84%), Gaps = 2/88 (2%)
 Frame = -1

Query: 258 TCPNRGVKLFGVRLTDGSSIRKSASMGNLTHFSGSNLTQLHNPAGNDSPG--GDTPDHGA 85
           TCPNRGVKLFGVRLT+GS IRKSASMGNL+H++GS  +  H   G+++PG  GD PDH A
Sbjct: 17  TCPNRGVKLFGVRLTEGS-IRKSASMGNLSHYTGSG-SGGHGGNGSNTPGSPGDNPDHVA 74

Query: 84  GDGYASEDFVPGSASSRERKRGNPWTEE 1
           GDGYASEDFV GS+SSRERK+G PWTEE
Sbjct: 75  GDGYASEDFVAGSSSSRERKKGTPWTEE 102


>ref|NP_001237520.1| MYB transcription factor MYB93 [Glycine max]
           gi|110931692|gb|ABH02845.1| MYB transcription factor
           MYB93 [Glycine max]
          Length = 333

 Score =  123 bits (309), Expect = 1e-26
 Identities = 65/89 (73%), Positives = 70/89 (78%), Gaps = 3/89 (3%)
 Frame = -1

Query: 258 TCPNRGVKLFGVRLTDGSSIRKSASMGNLTHFSGSNLTQLHNPAGNDSPGGDTPDH--GA 85
           TCPNRGVKLFGVRLTDGS IRKSASMGNLTH++GS    LH    N    G+TPDH   A
Sbjct: 17  TCPNRGVKLFGVRLTDGS-IRKSASMGNLTHYAGSGSAPLHVGLNNPGSPGETPDHAAAA 75

Query: 84  GDGYASEDFVPG-SASSRERKRGNPWTEE 1
            DGYASEDFVPG S+SSRERK+G PWTEE
Sbjct: 76  ADGYASEDFVPGSSSSSRERKKGVPWTEE 104


>ref|XP_002865122.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
           gi|297310957|gb|EFH41381.1| myb family transcription
           factor [Arabidopsis lyrata subsp. lyrata]
          Length = 366

 Score =  122 bits (307), Expect = 2e-26
 Identities = 63/88 (71%), Positives = 73/88 (82%), Gaps = 2/88 (2%)
 Frame = -1

Query: 258 TCPNRGVKLFGVRLTDGSSIRKSASMGNLTHFSGSNLTQLHNPAGNDSPG--GDTPDHGA 85
           TCPNRGVKLFGVRLT+GS IRKSASMGNL+H++GS      +  G+++PG  GD PDH A
Sbjct: 17  TCPNRGVKLFGVRLTEGS-IRKSASMGNLSHYTGSGSGG--HGTGSNTPGSPGDVPDHVA 73

Query: 84  GDGYASEDFVPGSASSRERKRGNPWTEE 1
           GDGYASEDFV GS+SSRERK+G PWTEE
Sbjct: 74  GDGYASEDFVAGSSSSRERKKGTPWTEE 101


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