BLASTX nr result

ID: Cnidium21_contig00015912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015912
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515265.1| pentatricopeptide repeat-containing protein,...   166   3e-39
ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2...   165   5e-39
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   156   2e-36
ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containi...   154   2e-35
ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|2...   151   8e-35

>ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545745|gb|EEF47249.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  166 bits (420), Expect = 3e-39
 Identities = 77/164 (46%), Positives = 114/164 (69%)
 Frame = -3

Query: 620 EWESTCSSYDRRLPNTAIAVYLKHDMIEEAENVFHNLVKRCKTPFYWSWGLFMSYYLEKH 441
           EWES C++YD R+ N AI V+L+HDM EEAE +F + +KR + PF+ +   FM ++L+ H
Sbjct: 341 EWESGCTNYDMRIANVAIRVFLQHDMYEEAELIFDDALKRTRGPFFKARERFMLFFLKIH 400

Query: 440 QIDLALRCLEAAITGINNNEWRPFAADVTKFMEHFKKQGDVTGAEKLCEILKKANCIDSE 261
           Q+DLAL+ + AA +    +EW+P    V  + ++F+ + DV GAEKL +ILK  NC++S 
Sbjct: 401 QLDLALKHMRAAFSESEKHEWKPLQETVNAYFDYFRTEKDVDGAEKLSKILKHINCLNSS 460

Query: 260 AYMLLLDVYVAADKTAPQIRCKMKDDGVEISSELEDLLRRVCPE 129
            Y LLL  Y+AA K AP++R ++++D +EIS ELE LL  VCP+
Sbjct: 461 VYSLLLKTYIAAGKLAPEMRQRLEEDNIEISDELEYLLESVCPK 504


>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score =  165 bits (418), Expect = 5e-39
 Identities = 79/163 (48%), Positives = 115/163 (70%)
 Frame = -3

Query: 620 EWESTCSSYDRRLPNTAIAVYLKHDMIEEAENVFHNLVKRCKTPFYWSWGLFMSYYLEKH 441
           EWES+C SYD RL N AI   L+HDM EEA  +F + +KR +  F+ +  +FM ++L+ H
Sbjct: 311 EWESSCHSYDMRLANVAIRACLEHDMYEEAALIFDDALKRTEGLFFNAREMFMVFFLKNH 370

Query: 440 QIDLALRCLEAAITGINNNEWRPFAADVTKFMEHFKKQGDVTGAEKLCEILKKANCIDSE 261
           Q+DLAL+ ++AA + +   EW+P    V+ F  +F+ + DV GAE+LC+ILK  N +DS 
Sbjct: 371 QLDLALKHMKAAFSEVKEIEWQPEPKTVSAFFAYFEDEKDVNGAERLCKILKHINRLDSN 430

Query: 260 AYMLLLDVYVAADKTAPQIRCKMKDDGVEISSELEDLLRRVCP 132
           AY LLL  Y+AA K AP++R ++++DG+EI+ ELE+LL RVCP
Sbjct: 431 AYDLLLKTYIAAGKLAPEMRQRLEEDGIEINPELENLLERVCP 473


>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  156 bits (395), Expect = 2e-36
 Identities = 75/164 (45%), Positives = 115/164 (70%)
 Frame = -3

Query: 620 EWESTCSSYDRRLPNTAIAVYLKHDMIEEAENVFHNLVKRCKTPFYWSWGLFMSYYLEKH 441
           EW+S+C S+D RL N A+  +L  DMI++AE++ +  VKR   PFY +  +FM+++L+  
Sbjct: 345 EWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKVR 404

Query: 440 QIDLALRCLEAAITGINNNEWRPFAADVTKFMEHFKKQGDVTGAEKLCEILKKANCIDSE 261
           +ID AL+ +EAA + + NNEW+P    V  F+++F+++ DV GAEK C+ILK  + +DS 
Sbjct: 405 EIDTALKYMEAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKNISGLDSN 464

Query: 260 AYMLLLDVYVAADKTAPQIRCKMKDDGVEISSELEDLLRRVCPE 129
           AY LLL   VAA +T P++R +MK+D +E+ S  +DLL+RV PE
Sbjct: 465 AYQLLLQTXVAAGRTEPEMRKRMKEDDIEVDS--KDLLQRVGPE 506


>ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial-like [Cucumis sativus]
           gi|449518825|ref|XP_004166436.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial-like [Cucumis sativus]
          Length = 474

 Score =  154 bits (388), Expect = 2e-35
 Identities = 74/164 (45%), Positives = 104/164 (63%)
 Frame = -3

Query: 620 EWESTCSSYDRRLPNTAIAVYLKHDMIEEAENVFHNLVKRCKTPFYWSWGLFMSYYLEKH 441
           EWES C ++D R+ N  I  YL+ DM E+A  +F +  KR K PF  +  +FM Y+L+  
Sbjct: 311 EWESNCRNFDLRIVNDIIGAYLQQDMYEDAAMIFEDATKRSKGPFSRAREMFMVYFLKLK 370

Query: 440 QIDLALRCLEAAITGINNNEWRPFAADVTKFMEHFKKQGDVTGAEKLCEILKKANCIDSE 261
           Q+D A   LE+A++     EW P  A  T F+ +F+++ DV GAE    ILK+  C+D+ 
Sbjct: 371 QVDSAFSHLESALSESKEKEWHPSLATTTAFLNYFEEEKDVEGAEDFARILKRLKCLDAS 430

Query: 260 AYMLLLDVYVAADKTAPQIRCKMKDDGVEISSELEDLLRRVCPE 129
            Y LLL  YVAA K AP +R ++K+D +EISSELE+LL  VCP+
Sbjct: 431 GYHLLLKTYVAAGKLAPDMRKRLKEDDIEISSELEELLGTVCPQ 474


>ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|222843242|gb|EEE80789.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  151 bits (382), Expect = 8e-35
 Identities = 74/164 (45%), Positives = 111/164 (67%)
 Frame = -3

Query: 620 EWESTCSSYDRRLPNTAIAVYLKHDMIEEAENVFHNLVKRCKTPFYWSWGLFMSYYLEKH 441
           EWES+C SYD  L N AI   L+HDM EEA ++F   +KR K  F+ +  +FM ++L+ H
Sbjct: 313 EWESSCHSYDMGLANVAIRACLEHDMYEEAASIFDEALKRTKGLFFKAREMFMVFFLKNH 372

Query: 440 QIDLALRCLEAAITGINNNEWRPFAADVTKFMEHFKKQGDVTGAEKLCEILKKANCIDSE 261
           Q DLAL+ ++AA +     EW+P    V+ F+ +F+   DV GAE+LC+I K+ N ++S 
Sbjct: 373 QPDLALKHMKAAFSEAKEIEWQPDQKTVSAFLNYFEDGKDVDGAERLCKIWKQINRLNSN 432

Query: 260 AYMLLLDVYVAADKTAPQIRCKMKDDGVEISSELEDLLRRVCPE 129
           AY+LLL  Y AA + AP++R ++++D +EI+ ELE+LL RV P+
Sbjct: 433 AYILLLKTYTAAGRLAPEMRQRLEEDNIEINPELENLLERVSPK 476


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