BLASTX nr result

ID: Cnidium21_contig00015843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015843
         (890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) poly...   300   3e-79
ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis ...   298   9e-79
emb|CBI36047.3| unnamed protein product [Vitis vinifera]              295   7e-78
ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vi...   295   7e-78
ref|XP_003533037.1| PREDICTED: poly(A) polymerase-like [Glycine ...   283   3e-74

>ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
           sativus]
          Length = 772

 Score =  300 bits (768), Expect = 3e-79
 Identities = 146/186 (78%), Positives = 167/186 (89%)
 Frame = -1

Query: 560 PMVVSEGLNNHPGVTKPLSLAGPSEADYVRNKELQKFLEDAGLHETKEEAVKRQHVLARI 381
           P+  ++ +    GVTKP+S+AGP + D  RNKEL+KFL DAGL+E+KEE+ KR+ VL+RI
Sbjct: 15  PLPANQAVPKCYGVTKPISMAGPCDTDVQRNKELEKFLVDAGLYESKEESAKREEVLSRI 74

Query: 380 REIVVVWVKQLTRLRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREE 201
            +IV  WVKQLTR++GYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREE
Sbjct: 75  GQIVKDWVKQLTRIKGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREE 134

Query: 200 DFFFSLHNILEEIEEVTELQPVPDAHVPVMKFKFDGISIDLLYASVSLLVVPDDLDISDV 21
           DFF+ LHNILEE+EEV+ELQPVPDAHVPVMKFKFDGISIDLLYAS+S LVVP+DLDISDV
Sbjct: 135 DFFYMLHNILEEMEEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDISDV 194

Query: 20  SVLYNV 3
           SVLYNV
Sbjct: 195 SVLYNV 200


>ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
          Length = 758

 Score =  298 bits (764), Expect = 9e-79
 Identities = 145/186 (77%), Positives = 166/186 (89%)
 Frame = -1

Query: 560 PMVVSEGLNNHPGVTKPLSLAGPSEADYVRNKELQKFLEDAGLHETKEEAVKRQHVLARI 381
           P+  ++ +    GVTKP+S+AGP + D  RNKEL+KFL DAGL+E+KEE+ KR+ VL+RI
Sbjct: 15  PLPANQAVPKCYGVTKPISMAGPCDTDVQRNKELEKFLVDAGLYESKEESAKREEVLSRI 74

Query: 380 REIVVVWVKQLTRLRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREE 201
            +IV  WVKQLTR++GYTDQMVEDANA IFTFGSYRLGVHGPGADIDTLCVGPSYVNREE
Sbjct: 75  GQIVKDWVKQLTRIKGYTDQMVEDANAAIFTFGSYRLGVHGPGADIDTLCVGPSYVNREE 134

Query: 200 DFFFSLHNILEEIEEVTELQPVPDAHVPVMKFKFDGISIDLLYASVSLLVVPDDLDISDV 21
           DFF+ LHNILEE+EEV+ELQPVPDAHVPVMKFKFDGISIDLLYAS+S LVVP+DLDISDV
Sbjct: 135 DFFYMLHNILEEMEEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDISDV 194

Query: 20  SVLYNV 3
           SVLYNV
Sbjct: 195 SVLYNV 200


>emb|CBI36047.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score =  295 bits (756), Expect = 7e-78
 Identities = 147/193 (76%), Positives = 168/193 (87%), Gaps = 8/193 (4%)
 Frame = -1

Query: 557 MVVSEGLNNHP--------GVTKPLSLAGPSEADYVRNKELQKFLEDAGLHETKEEAVKR 402
           MV S+GL + P        GVTKP+S+AGP+E D  R+ EL+KFL DAGL+E+KEEA+KR
Sbjct: 1   MVSSKGLGDSPPRQSVKQYGVTKPISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIKR 60

Query: 401 QHVLARIREIVVVWVKQLTRLRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGP 222
             VL R+ +IV  WVKQLTRLRGYTDQMVEDANAV+FTFGSYRLGVHGPG DIDTLC+GP
Sbjct: 61  AEVLDRLGQIVKDWVKQLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGP 120

Query: 221 SYVNREEDFFFSLHNILEEIEEVTELQPVPDAHVPVMKFKFDGISIDLLYASVSLLVVPD 42
           SYV+REEDFFF LHNIL ++EEVTELQPVPDAHVPVMKFKFDGISIDLLYAS+SLLVVP+
Sbjct: 121 SYVSREEDFFFILHNILADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPE 180

Query: 41  DLDISDVSVLYNV 3
           DLDISD+SVLYN+
Sbjct: 181 DLDISDLSVLYNI 193


>ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 770

 Score =  295 bits (756), Expect = 7e-78
 Identities = 147/193 (76%), Positives = 168/193 (87%), Gaps = 8/193 (4%)
 Frame = -1

Query: 557 MVVSEGLNNHP--------GVTKPLSLAGPSEADYVRNKELQKFLEDAGLHETKEEAVKR 402
           MV S+GL + P        GVTKP+S+AGP+E D  R+ EL+KFL DAGL+E+KEEA+KR
Sbjct: 1   MVSSKGLGDSPPRQSVKQYGVTKPISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIKR 60

Query: 401 QHVLARIREIVVVWVKQLTRLRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGP 222
             VL R+ +IV  WVKQLTRLRGYTDQMVEDANAV+FTFGSYRLGVHGPG DIDTLC+GP
Sbjct: 61  AEVLDRLGQIVKDWVKQLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGP 120

Query: 221 SYVNREEDFFFSLHNILEEIEEVTELQPVPDAHVPVMKFKFDGISIDLLYASVSLLVVPD 42
           SYV+REEDFFF LHNIL ++EEVTELQPVPDAHVPVMKFKFDGISIDLLYAS+SLLVVP+
Sbjct: 121 SYVSREEDFFFILHNILADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPE 180

Query: 41  DLDISDVSVLYNV 3
           DLDISD+SVLYN+
Sbjct: 181 DLDISDLSVLYNI 193


>ref|XP_003533037.1| PREDICTED: poly(A) polymerase-like [Glycine max]
          Length = 790

 Score =  283 bits (725), Expect = 3e-74
 Identities = 137/174 (78%), Positives = 157/174 (90%)
 Frame = -1

Query: 524 GVTKPLSLAGPSEADYVRNKELQKFLEDAGLHETKEEAVKRQHVLARIREIVVVWVKQLT 345
           GVTKP+S+AGP+  D  R +EL+KFL  +GL+E+KEEA KR+ VL R+ EIV  WVKQLT
Sbjct: 15  GVTKPISMAGPTVTDLQRTRELEKFLAVSGLYESKEEAAKREEVLHRLGEIVKNWVKQLT 74

Query: 344 RLRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFFSLHNILEE 165
           RLRGYTDQMVEDANAVI TFGSYRLGVHGPGAD+DTLC+GPSYVNREEDFF++LH+IL  
Sbjct: 75  RLRGYTDQMVEDANAVILTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTLHDILAN 134

Query: 164 IEEVTELQPVPDAHVPVMKFKFDGISIDLLYASVSLLVVPDDLDISDVSVLYNV 3
           IEEVTELQP+PDAHVPVMKFKFDGISIDLLYAS+S L+VP+DLDISDVSVL+NV
Sbjct: 135 IEEVTELQPIPDAHVPVMKFKFDGISIDLLYASISRLIVPEDLDISDVSVLHNV 188


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