BLASTX nr result

ID: Cnidium21_contig00015842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015842
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) poly...   126   2e-27
ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis ...   124   6e-27
emb|CBI36047.3| unnamed protein product [Vitis vinifera]              124   8e-27
ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vi...   124   8e-27
ref|XP_003526506.1| PREDICTED: poly(A) polymerase-like [Glycine ...   120   1e-25

>ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
           sativus]
          Length = 772

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/86 (69%), Positives = 72/86 (83%)
 Frame = +1

Query: 67  GVTKPLSLTGPTQSDFTRNNLLQKLLEDAGLYETPEEASKRQHVLTRIREIVIDWVKHLT 246
           GVTKP+S+ GP  +D  RN  L+K L DAGLYE+ EE++KR+ VL+RI +IV DWVK LT
Sbjct: 27  GVTKPISMAGPCDTDVQRNKELEKFLVDAGLYESKEESAKREEVLSRIGQIVKDWVKQLT 86

Query: 247 RLRGYTDQMVEDANAVIFTFGSYRLG 324
           R++GYTDQMVEDANAVIFTFGSYRLG
Sbjct: 87  RIKGYTDQMVEDANAVIFTFGSYRLG 112


>ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
          Length = 758

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/86 (68%), Positives = 71/86 (82%)
 Frame = +1

Query: 67  GVTKPLSLTGPTQSDFTRNNLLQKLLEDAGLYETPEEASKRQHVLTRIREIVIDWVKHLT 246
           GVTKP+S+ GP  +D  RN  L+K L DAGLYE+ EE++KR+ VL+RI +IV DWVK LT
Sbjct: 27  GVTKPISMAGPCDTDVQRNKELEKFLVDAGLYESKEESAKREEVLSRIGQIVKDWVKQLT 86

Query: 247 RLRGYTDQMVEDANAVIFTFGSYRLG 324
           R++GYTDQMVEDANA IFTFGSYRLG
Sbjct: 87  RIKGYTDQMVEDANAAIFTFGSYRLG 112


>emb|CBI36047.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score =  124 bits (311), Expect = 8e-27
 Identities = 65/104 (62%), Positives = 77/104 (74%), Gaps = 7/104 (6%)
 Frame = +1

Query: 34  MASEGLDQLPA-------GVTKPLSLTGPTQSDFTRNNLLQKLLEDAGLYETPEEASKRQ 192
           ++S+GL   P        GVTKP+S+ GPT+ D  R+  L+K L DAGLYE+ EEA KR 
Sbjct: 2   VSSKGLGDSPPRQSVKQYGVTKPISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIKRA 61

Query: 193 HVLTRIREIVIDWVKHLTRLRGYTDQMVEDANAVIFTFGSYRLG 324
            VL R+ +IV DWVK LTRLRGYTDQMVEDANAV+FTFGSYRLG
Sbjct: 62  EVLDRLGQIVKDWVKQLTRLRGYTDQMVEDANAVLFTFGSYRLG 105


>ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 770

 Score =  124 bits (311), Expect = 8e-27
 Identities = 65/104 (62%), Positives = 77/104 (74%), Gaps = 7/104 (6%)
 Frame = +1

Query: 34  MASEGLDQLPA-------GVTKPLSLTGPTQSDFTRNNLLQKLLEDAGLYETPEEASKRQ 192
           ++S+GL   P        GVTKP+S+ GPT+ D  R+  L+K L DAGLYE+ EEA KR 
Sbjct: 2   VSSKGLGDSPPRQSVKQYGVTKPISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIKRA 61

Query: 193 HVLTRIREIVIDWVKHLTRLRGYTDQMVEDANAVIFTFGSYRLG 324
            VL R+ +IV DWVK LTRLRGYTDQMVEDANAV+FTFGSYRLG
Sbjct: 62  EVLDRLGQIVKDWVKQLTRLRGYTDQMVEDANAVLFTFGSYRLG 105


>ref|XP_003526506.1| PREDICTED: poly(A) polymerase-like [Glycine max]
          Length = 732

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/86 (69%), Positives = 68/86 (79%)
 Frame = +1

Query: 67  GVTKPLSLTGPTQSDFTRNNLLQKLLEDAGLYETPEEASKRQHVLTRIREIVIDWVKHLT 246
           G TKPLSL GPT +D  RNN L K L D+GLYE+ EE++ R+ VL R+ +IV  WVK LT
Sbjct: 25  GFTKPLSLAGPTDADLQRNNDLDKFLLDSGLYESNEESAARKEVLHRLDQIVKSWVKQLT 84

Query: 247 RLRGYTDQMVEDANAVIFTFGSYRLG 324
           R RGYTDQMVEDANAVIFTFGSYRLG
Sbjct: 85  RQRGYTDQMVEDANAVIFTFGSYRLG 110


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