BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015840
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...   138   1e-30
emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [M...   137   2e-30
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...   136   6e-30
emb|CAN60502.1| hypothetical protein VITISV_031514 [Vitis vinifera]   135   1e-29
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]   135   1e-29

>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score =  138 bits (347), Expect = 1e-30
 Identities = 72/144 (50%), Positives = 88/144 (61%)
 Frame = -2

Query: 764  ELHALEENNTWDITILPPGKKSIGCKWLYKTKFRVDGIIELFKARLVVLGCKQVYGVDYE 585
            E+ ALE N TWDI  LPPGK +IG +W+YKTK+  DG IE +KARLVV G KQV G DY 
Sbjct: 658  EVDALEINKTWDIVDLPPGKVAIGSQWVYKTKYNADGSIERYKARLVVQGNKQVEGEDYN 717

Query: 584  QTFTPVGKMXXXXXXXXXXXVNDWIVVQINVMNAFLHGELDDTVYMRMPLGYTHAGCRII 405
            +TF PV KM            N W V Q++V NAFLHG+LD+ VYM++P G+ H+     
Sbjct: 718  ETFAPVVKMTTVRTLLRLVAANQWEVYQMDVNNAFLHGDLDEEVYMKLPPGFRHS----- 772

Query: 404  MSPGECVSTGDTTLVCRLKKSLYG 333
                          VCRL+KSLYG
Sbjct: 773  ----------HPDKVCRLRKSLYG 786


>emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [Malus x domestica]
          Length = 1390

 Score =  137 bits (346), Expect = 2e-30
 Identities = 67/144 (46%), Positives = 89/144 (61%)
 Frame = -2

Query: 764  ELHALEENNTWDITILPPGKKSIGCKWLYKTKFRVDGIIELFKARLVVLGCKQVYGVDYE 585
            E+ AL++NNTW++T LP GKK++GC+W++  K++ DG I+ +KARLV  G  Q YGVDY+
Sbjct: 900  EMLALQKNNTWEVTSLPEGKKTVGCRWVFTVKYQADGSIDRYKARLVAKGYTQTYGVDYQ 959

Query: 584  QTFTPVGKMXXXXXXXXXXXVNDWIVVQINVMNAFLHGELDDTVYMRMPLGYTHAGCRII 405
            +TF+PV KM             DW + Q +V NAFLHG L++ VYM  P GY        
Sbjct: 960  ETFSPVAKMNTVRVLISLAANMDWPLKQFDVKNAFLHGNLEEEVYMDFPPGY-------- 1011

Query: 404  MSPGECVSTGDTTLVCRLKKSLYG 333
                   S G  T VCRL+KSLYG
Sbjct: 1012 -------SVGRNTGVCRLRKSLYG 1028


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score =  136 bits (342), Expect = 6e-30
 Identities = 71/157 (45%), Positives = 92/157 (58%), Gaps = 1/157 (0%)
 Frame = -2

Query: 764  ELHALEENNTWDITILPPGKKSIGCKWLYKTKFRVDGIIELFKARLVVLGCKQVYGVDYE 585
            E+ +LE   TW +  LPPGKK++GCKW+++ K++ DG +E  KARLVVLG  Q  G+DY 
Sbjct: 996  EIGSLENLGTWTVEDLPPGKKALGCKWVFRLKYKSDGTLERHKARLVVLGNNQTEGLDYT 1055

Query: 584  QTFTPVGKMXXXXXXXXXXXVNDWIVVQINVMNAFLHGELDDTVYMRMPLGYTHAGCRII 405
            +TF PV KM             DW V Q++V NAFLHG+LD+ VYM+ P G+        
Sbjct: 1056 ETFAPVAKMVTVRAFLQQVVSLDWEVHQMDVHNAFLHGDLDEEVYMQFPPGF-------- 1107

Query: 404  MSPGECVSTGDTTLVCRLKKSLYG-RPGNSCCFVSCT 297
                    TGD T VCRL+KSLYG +    C F   T
Sbjct: 1108 -------RTGDKTKVCRLRKSLYGLKQAPRCWFAKLT 1137


>emb|CAN60502.1| hypothetical protein VITISV_031514 [Vitis vinifera]
          Length = 714

 Score =  135 bits (340), Expect = 1e-29
 Identities = 67/144 (46%), Positives = 86/144 (59%)
 Frame = -2

Query: 764 ELHALEENNTWDITILPPGKKSIGCKWLYKTKFRVDGIIELFKARLVVLGCKQVYGVDYE 585
           E+ +L++N TW++   PPGKK +GC+W+Y  K++ DG IELFKARLVV G  Q YG+DY 
Sbjct: 278 EMKSLQKNETWELVECPPGKKPVGCRWIYTVKYKADGSIELFKARLVVKGYTQTYGIDYT 337

Query: 584 QTFTPVGKMXXXXXXXXXXXVNDWIVVQINVMNAFLHGELDDTVYMRMPLGYTHAGCRII 405
           +TF PV K+             DW + Q +V NAFLHGEL + VYM +P           
Sbjct: 338 ETFAPVTKINTVRVLLSLAANLDWPLQQFDVKNAFLHGELSEEVYMDLP----------- 386

Query: 404 MSPGECVSTGDTTLVCRLKKSLYG 333
             PG  VS      VC+LKKSLYG
Sbjct: 387 --PGCMVSEKQCQKVCKLKKSLYG 408


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score =  135 bits (339), Expect = 1e-29
 Identities = 67/144 (46%), Positives = 90/144 (62%)
 Frame = -2

Query: 764  ELHALEENNTWDITILPPGKKSIGCKWLYKTKFRVDGIIELFKARLVVLGCKQVYGVDYE 585
            ELHALE+N+TW +T LP G + IGCKW+YK K+  DG +E +KARLV  G  Q  G+DY+
Sbjct: 970  ELHALEQNHTWTLTPLPYGHRPIGCKWVYKIKYNSDGTVERYKARLVAKGFTQREGIDYK 1029

Query: 584  QTFTPVGKMXXXXXXXXXXXVNDWIVVQINVMNAFLHGELDDTVYMRMPLGYTHAGCRII 405
            +TF+PV K+           V  W + Q++V NAFLHG+L + VYM++PLG+        
Sbjct: 1030 ETFSPVAKLTTVRCLLAIAAVRHWSLHQMDVQNAFLHGDLLEEVYMQLPLGFR------- 1082

Query: 404  MSPGECVSTGDTTLVCRLKKSLYG 333
                     G+T +VCRL KSLYG
Sbjct: 1083 -------QQGETPMVCRLNKSLYG 1099