BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015803
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327002.1| predicted protein [Populus trichocarpa] gi|2...   313   1e-83
ref|XP_003622549.1| Nuclear pore glycoprotein [Medicago truncatu...   311   9e-83
ref|XP_004164977.1| PREDICTED: nucleoporin nsp1-like [Cucumis sa...   308   6e-82
ref|XP_002880150.1| hypothetical protein ARALYDRAFT_483630 [Arab...   308   6e-82
ref|NP_850429.1| structural constituent of nuclear pore [Arabido...   308   6e-82

>ref|XP_002327002.1| predicted protein [Populus trichocarpa] gi|222835317|gb|EEE73752.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  313 bits (803), Expect = 1e-83
 Identities = 159/188 (84%), Positives = 171/188 (90%)
 Frame = -1

Query: 566 TAAAASVPKLPSEITGRSVEEIIKEWNAELQARTGKFRKQATAIGEWDRRILQNRDALLR 387
           + A  + PKLPSEITG++VEEIIKEWN+ELQ RTGKFRKQATAI EWD+RILQNRD LLR
Sbjct: 30  STALTATPKLPSEITGKTVEEIIKEWNSELQERTGKFRKQATAIAEWDKRILQNRDVLLR 89

Query: 386 LETEVANVVETQTNLERQLELIETHQEEVDKALQSMEDEAERIYKDERALLLDDEAASTR 207
           LE EVA VVETQ NLER+LELIETHQ+EVDKALQS+E+EAERIYKDER  LLDDEAASTR
Sbjct: 90  LEIEVAKVVETQANLERKLELIETHQQEVDKALQSIEEEAERIYKDERGSLLDDEAASTR 149

Query: 206 DAMYEQAEFIERELEHMTEQIKSVIQAVNANQAGELEATDGMTPLDAVVRILNNQLSSLM 27
           DAMYEQAEFIERE+E MTEQIKSVIQ VNANQ GEL+A DGMTPLD VVRILNNQLSSLM
Sbjct: 150 DAMYEQAEFIEREMEQMTEQIKSVIQTVNANQGGELDAIDGMTPLDMVVRILNNQLSSLM 209

Query: 26  WIDEKAEE 3
           WIDEKAEE
Sbjct: 210 WIDEKAEE 217


>ref|XP_003622549.1| Nuclear pore glycoprotein [Medicago truncatula]
           gi|355497564|gb|AES78767.1| Nuclear pore glycoprotein
           [Medicago truncatula]
          Length = 299

 Score =  311 bits (796), Expect = 9e-83
 Identities = 156/188 (82%), Positives = 173/188 (92%)
 Frame = -1

Query: 566 TAAAASVPKLPSEITGRSVEEIIKEWNAELQARTGKFRKQATAIGEWDRRILQNRDALLR 387
           + + A+ PKLPSEITG++VEEIIKEWNAELQ RTGKFRKQA AI EWDRRILQNRD LLR
Sbjct: 85  STSVAATPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDVLLR 144

Query: 386 LETEVANVVETQTNLERQLELIETHQEEVDKALQSMEDEAERIYKDERALLLDDEAASTR 207
           LE EVA VVETQ++LERQLELIETHQ+EVDKALQS+E+EAERIYKDER LLLDDEAASTR
Sbjct: 145 LEIEVAKVVETQSSLERQLELIETHQQEVDKALQSVEEEAERIYKDERGLLLDDEAASTR 204

Query: 206 DAMYEQAEFIERELEHMTEQIKSVIQAVNANQAGELEATDGMTPLDAVVRILNNQLSSLM 27
           DAMYEQ+E IERELE MTEQIKS+I ++N+NQ GE+EA DGMTPLDAVVRILNNQL+SLM
Sbjct: 205 DAMYEQSELIERELEQMTEQIKSIIHSLNSNQGGEVEAPDGMTPLDAVVRILNNQLTSLM 264

Query: 26  WIDEKAEE 3
           WIDEKAEE
Sbjct: 265 WIDEKAEE 272


>ref|XP_004164977.1| PREDICTED: nucleoporin nsp1-like [Cucumis sativus]
          Length = 757

 Score =  308 bits (789), Expect = 6e-82
 Identities = 155/188 (82%), Positives = 170/188 (90%)
 Frame = -1

Query: 566  TAAAASVPKLPSEITGRSVEEIIKEWNAELQARTGKFRKQATAIGEWDRRILQNRDALLR 387
            +A  +S PKLPSEITG++VEEIIKEWNAELQ RTGKFRKQA AI EWDRRI+QNRD LLR
Sbjct: 542  SATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLR 601

Query: 386  LETEVANVVETQTNLERQLELIETHQEEVDKALQSMEDEAERIYKDERALLLDDEAASTR 207
            LE EVA VVETQ  LE++LELIETHQ+EVDKAL S+E++AERIYKDER LLLDDEAASTR
Sbjct: 602  LEIEVAKVVETQAELEKKLELIETHQQEVDKALVSVEEDAERIYKDERGLLLDDEAASTR 661

Query: 206  DAMYEQAEFIERELEHMTEQIKSVIQAVNANQAGELEATDGMTPLDAVVRILNNQLSSLM 27
            DAMYEQAE+IERELE MTEQIKS+IQ +NANQ GEL+  DGMTPLDAVVRILNNQLSSLM
Sbjct: 662  DAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLM 721

Query: 26   WIDEKAEE 3
            WIDEKAEE
Sbjct: 722  WIDEKAEE 729


>ref|XP_002880150.1| hypothetical protein ARALYDRAFT_483630 [Arabidopsis lyrata subsp.
            lyrata] gi|297325989|gb|EFH56409.1| hypothetical protein
            ARALYDRAFT_483630 [Arabidopsis lyrata subsp. lyrata]
          Length = 737

 Score =  308 bits (789), Expect = 6e-82
 Identities = 155/187 (82%), Positives = 169/187 (90%)
 Frame = -1

Query: 563  AAAASVPKLPSEITGRSVEEIIKEWNAELQARTGKFRKQATAIGEWDRRILQNRDALLRL 384
            A  A  PKLPSEITG++VEEIIKEWN ELQ RTG+FRKQA AI EWD+RILQNRD LLRL
Sbjct: 524  APVAGSPKLPSEITGKTVEEIIKEWNTELQERTGRFRKQANAIAEWDKRILQNRDVLLRL 583

Query: 383  ETEVANVVETQTNLERQLELIETHQEEVDKALQSMEDEAERIYKDERALLLDDEAASTRD 204
            E EVA VVETQ++LERQLELIETHQ+EVDKALQSME+EAERIY DER  LLDDEAASTRD
Sbjct: 584  EIEVAKVVETQSSLERQLELIETHQQEVDKALQSMEEEAERIYNDERKSLLDDEAASTRD 643

Query: 203  AMYEQAEFIERELEHMTEQIKSVIQAVNANQAGELEATDGMTPLDAVVRILNNQLSSLMW 24
            AMYEQ+E +ERELEHMTEQI+S+IQ+VNANQ GELEA DGM+PLD VVRILNNQLSSLMW
Sbjct: 644  AMYEQSELVERELEHMTEQIRSIIQSVNANQGGELEAIDGMSPLDVVVRILNNQLSSLMW 703

Query: 23   IDEKAEE 3
            IDEKAEE
Sbjct: 704  IDEKAEE 710


>ref|NP_850429.1| structural constituent of nuclear pore [Arabidopsis thaliana]
            gi|22136928|gb|AAM91808.1| unknown protein [Arabidopsis
            thaliana] gi|330255401|gb|AEC10495.1| structural
            constituent of nuclear pore [Arabidopsis thaliana]
          Length = 739

 Score =  308 bits (789), Expect = 6e-82
 Identities = 155/187 (82%), Positives = 169/187 (90%)
 Frame = -1

Query: 563  AAAASVPKLPSEITGRSVEEIIKEWNAELQARTGKFRKQATAIGEWDRRILQNRDALLRL 384
            A  A  PKLPSEITG++VEEIIKEWN ELQ RTG+FRKQA AI EWD+RILQNRD LLRL
Sbjct: 526  APVAGSPKLPSEITGKTVEEIIKEWNTELQERTGRFRKQANAIAEWDKRILQNRDVLLRL 585

Query: 383  ETEVANVVETQTNLERQLELIETHQEEVDKALQSMEDEAERIYKDERALLLDDEAASTRD 204
            E EVA VVETQ++LERQLELIETHQ+EVDKALQSME+EAERIY DER  LLDDEAASTRD
Sbjct: 586  EIEVAKVVETQSSLERQLELIETHQQEVDKALQSMEEEAERIYNDERKSLLDDEAASTRD 645

Query: 203  AMYEQAEFIERELEHMTEQIKSVIQAVNANQAGELEATDGMTPLDAVVRILNNQLSSLMW 24
            AMYEQ+E +ERELEHMTEQI+S+IQ+VNANQ GELEA DGM+PLD VVRILNNQLSSLMW
Sbjct: 646  AMYEQSELVERELEHMTEQIRSIIQSVNANQGGELEAIDGMSPLDVVVRILNNQLSSLMW 705

Query: 23   IDEKAEE 3
            IDEKAEE
Sbjct: 706  IDEKAEE 712