BLASTX nr result

ID: Cnidium21_contig00015743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015743
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521730.1| 50S robosomal protein L11, putative [Ricinus...   218   5e-55
ref|XP_002304331.1| predicted protein [Populus trichocarpa] gi|1...   214   9e-54
ref|XP_004142176.1| PREDICTED: 54S ribosomal protein L19, mitoch...   211   6e-53
ref|XP_002277084.1| PREDICTED: 60S ribosomal protein L19, mitoch...   210   2e-52
gb|AEO33263.1| hypothetical protein [Amblyomma maculatum]             203   2e-50

>ref|XP_002521730.1| 50S robosomal protein L11, putative [Ricinus communis]
           gi|223539121|gb|EEF40717.1| 50S robosomal protein L11,
           putative [Ricinus communis]
          Length = 155

 Score =  218 bits (556), Expect = 5e-55
 Identities = 106/118 (89%), Positives = 114/118 (96%)
 Frame = +1

Query: 46  QYRLNLMAFCKDFNARTQKYKPETPMAVTITAFKDNTFEFSVKSPSVTWYLKKAAGIESG 225
           QYRLNLMAFCKDFNARTQKYKP+TPMAVTITAFKDNTFEF+VKSPSVTWYLKKAAGIESG
Sbjct: 38  QYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESG 97

Query: 226 SSRPGHVEASTISLKHVYEIAKVKQSDPFCAYMSLESISKSIIGTAISMGIQVKKDLD 399
           SSRPGHV AST++LKHVYEIAKVKQSDP+C YMSLESISKS+IGTA +MGI+V KDLD
Sbjct: 98  SSRPGHVVASTVTLKHVYEIAKVKQSDPYCQYMSLESISKSVIGTANAMGIKVVKDLD 155


>ref|XP_002304331.1| predicted protein [Populus trichocarpa] gi|118482503|gb|ABK93174.1|
           unknown [Populus trichocarpa]
           gi|222841763|gb|EEE79310.1| predicted protein [Populus
           trichocarpa]
          Length = 155

 Score =  214 bits (545), Expect = 9e-54
 Identities = 102/118 (86%), Positives = 113/118 (95%)
 Frame = +1

Query: 46  QYRLNLMAFCKDFNARTQKYKPETPMAVTITAFKDNTFEFSVKSPSVTWYLKKAAGIESG 225
           QYRLNLMAFCKDFNARTQKYKP+TPM+VTITAFKDNTFEF+VKSPSVTWYLKKAAG+ESG
Sbjct: 38  QYRLNLMAFCKDFNARTQKYKPDTPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGVESG 97

Query: 226 SSRPGHVEASTISLKHVYEIAKVKQSDPFCAYMSLESISKSIIGTAISMGIQVKKDLD 399
           S RPGH+EAST++LKHVYEIAKVKQSDP+C YMSLESI KSI+GTA +MGI+V KDLD
Sbjct: 98  SGRPGHLEASTVTLKHVYEIAKVKQSDPYCQYMSLESICKSIMGTANTMGIKVVKDLD 155


>ref|XP_004142176.1| PREDICTED: 54S ribosomal protein L19, mitochondrial-like [Cucumis
           sativus] gi|449503431|ref|XP_004161999.1| PREDICTED: 54S
           ribosomal protein L19, mitochondrial-like [Cucumis
           sativus]
          Length = 155

 Score =  211 bits (538), Expect = 6e-53
 Identities = 103/118 (87%), Positives = 111/118 (94%)
 Frame = +1

Query: 46  QYRLNLMAFCKDFNARTQKYKPETPMAVTITAFKDNTFEFSVKSPSVTWYLKKAAGIESG 225
           QYRLNLMAFCKDFNARTQKYKPETPMAVTITAFKDNTFEF+VKSPSVTWYLKKAAGIESG
Sbjct: 38  QYRLNLMAFCKDFNARTQKYKPETPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESG 97

Query: 226 SSRPGHVEASTISLKHVYEIAKVKQSDPFCAYMSLESISKSIIGTAISMGIQVKKDLD 399
           SSRPGHV AST+S+KH+YEIAKVKQSDP+C YM LESI KSIIGTA SMGI+V  +L+
Sbjct: 98  SSRPGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 155


>ref|XP_002277084.1| PREDICTED: 60S ribosomal protein L19, mitochondrial [Vitis
           vinifera] gi|147806139|emb|CAN70008.1| hypothetical
           protein VITISV_038751 [Vitis vinifera]
          Length = 155

 Score =  210 bits (534), Expect = 2e-52
 Identities = 101/118 (85%), Positives = 111/118 (94%)
 Frame = +1

Query: 46  QYRLNLMAFCKDFNARTQKYKPETPMAVTITAFKDNTFEFSVKSPSVTWYLKKAAGIESG 225
           QYRLNLMAFCKDFNARTQKYKP+TPMAVTITA+KDNTFEF+VKSPSVTWYLKKAAGIE G
Sbjct: 38  QYRLNLMAFCKDFNARTQKYKPDTPMAVTITAYKDNTFEFTVKSPSVTWYLKKAAGIELG 97

Query: 226 SSRPGHVEASTISLKHVYEIAKVKQSDPFCAYMSLESISKSIIGTAISMGIQVKKDLD 399
           S RPGHV AS+++LKH+YEIAKVKQSDP+C YMSLESI KSIIGTA +MGIQV K+LD
Sbjct: 98  SGRPGHVVASSVTLKHIYEIAKVKQSDPYCQYMSLESICKSIIGTANTMGIQVVKELD 155


>gb|AEO33263.1| hypothetical protein [Amblyomma maculatum]
          Length = 184

 Score =  203 bits (517), Expect = 2e-50
 Identities = 100/117 (85%), Positives = 107/117 (91%)
 Frame = +1

Query: 46  QYRLNLMAFCKDFNARTQKYKPETPMAVTITAFKDNTFEFSVKSPSVTWYLKKAAGIESG 225
           QYRLNLMAFCKDFNARTQKYKP+TPMAVTITAFKDNTFEF VKSPS+TWYLK+AAGIESG
Sbjct: 68  QYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFVVKSPSITWYLKRAAGIESG 127

Query: 226 SSRPGHVEASTISLKHVYEIAKVKQSDPFCAYMSLESISKSIIGTAISMGIQVKKDL 396
           S RPGHV  S+I+L HVYEIAKVKQSDP C YMSLE+I KSIIGTA +MGIQV KDL
Sbjct: 128 SGRPGHVVVSSITLTHVYEIAKVKQSDPNCQYMSLEAICKSIIGTANTMGIQVVKDL 184


Top