BLASTX nr result

ID: Cnidium21_contig00015726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015726
         (1388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593029.1| DEAD box ATP-dependent RNA helicase [Medicag...   691   0.0  
ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putativ...   689   0.0  
ref|XP_003517532.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   678   0.0  
ref|XP_003537899.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   678   0.0  
ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   676   0.0  

>ref|XP_003593029.1| DEAD box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355482077|gb|AES63280.1| DEAD box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 1148

 Score =  691 bits (1782), Expect = 0.0
 Identities = 354/470 (75%), Positives = 397/470 (84%), Gaps = 10/470 (2%)
 Frame = -1

Query: 1388 SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVENTRPDRQTVLFSATFPRQVEVLAR 1209
            SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIV+N RPDRQTVLFSATFPRQVE+LAR
Sbjct: 674  SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 733

Query: 1208 KVLNNPVEIQVGGRSVVNKDITQLVEMRSESDRFLRLLQVLGEWYEKGKILVFVQSQDRC 1029
            KVLN PVEIQVGGRSVVNKDI QLVE+R E++RFLRLL++LGEWYEKGKILVFV SQD+C
Sbjct: 734  KVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYEKGKILVFVHSQDKC 793

Query: 1028 DALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCSLLIATSIAARGLDVKELELVI 849
            DALF+DL+KHGYPCLSLHGAKDQTDRESTISDFKSNVC+LL+ATSIAARGLDVKELELVI
Sbjct: 794  DALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVI 853

Query: 848  NFDVPNHYEDYVHRVGRTGRAGRKGVAITFISEEDARYAPNLVKALELSEQAVPDDLKAL 669
            NFDVPNHYEDYVHRVGRTGRAGRKG AITFISEEDARYAP+LVKALELSEQ VPDDLK+L
Sbjct: 854  NFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELSEQIVPDDLKSL 913

Query: 668  ADGFKAKVKQGTEKFHRTGYGGSGFKFNEEEDEVRKAAKKAQAKEYGVEEDKSXXXXXXD 489
            A+GF AKV QG E+ H TGYGG+GFKFNEEEDEVR+AAKKAQAKEYG EEDKS      +
Sbjct: 914  AEGFMAKVTQGLEQAHGTGYGGTGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDE 973

Query: 488  GVRESS------LPTLGIPNVVLLGAIPSGPSTIL----ATAVDGDARGVALAAVTKLQQ 339
            G+R++          +    ++ +G IPS  ST+L    + A +  A   ALAA+  LQQ
Sbjct: 974  GIRKAGGDISQHHTPISAAQLIPIGGIPS-VSTVLPVIGSIATNDGATRAALAAM-NLQQ 1031

Query: 338  NLARIQAYTPSNRYETELEINDVPKNARWKVTHRETLGPISDWFGVTITTRGQYFPPGIN 159
            N+A+IQ+      YE ELEIND P+NARWKVTH+ETLGPIS+W G  ITTRGQ+FPPG  
Sbjct: 1032 NIAKIQSEALPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQFFPPGKV 1091

Query: 158  PGPGEKKLYLFIEGPSEQSIKDARAALKKTLLDITAQASSLPGSGQPGRY 9
             GPG++KLYLFIEGPSEQS+K A+A LK+ L DIT QA  LPG  QPG+Y
Sbjct: 1092 AGPGDRKLYLFIEGPSEQSVKRAKAELKRVLEDITHQALQLPGGTQPGKY 1141


>ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223530219|gb|EEF32123.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 1173

 Score =  689 bits (1778), Expect = 0.0
 Identities = 359/503 (71%), Positives = 395/503 (78%), Gaps = 43/503 (8%)
 Frame = -1

Query: 1388 SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVENTRPDRQTVLFSATFPRQVEVLAR 1209
            S GKITNLRRVTYLVMDEADRMFDMGFEPQITRIV+N RPDRQTVLFSATFPRQVE+LAR
Sbjct: 668  SGGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 727

Query: 1208 KVLNNPVEIQVGGRSVVNKDITQLVEMRSESDRFLRLLQVLGEWYEKGKILVFVQSQDRC 1029
            KVLN PVEIQVGGRSVVNKDITQLVE+R ES+RFLRLL++LGEW EKGKIL+FVQSQD+C
Sbjct: 728  KVLNKPVEIQVGGRSVVNKDITQLVEVRPESERFLRLLELLGEWNEKGKILIFVQSQDKC 787

Query: 1028 DALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCSLLIATSIAARGLDVKELELVI 849
            DALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVC+LLIATSIAARGLDVKEL+LV+
Sbjct: 788  DALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELDLVV 847

Query: 848  NFDVPNHYEDYVHRVGRTGRAGRKGVAITFISEEDARYAPNLVKALELSEQAVPDDLKAL 669
            NFDVPNHYEDYVHRVGRTGRAGRKG AITFISEEDARYAP+LVKALELSEQ VP+DLKAL
Sbjct: 848  NFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELSEQVVPEDLKAL 907

Query: 668  ADGFKAKVKQGTEKFHRTGYGGSGFKFNEEEDEVRKAAKKAQAKEYGVEEDKSXXXXXXD 489
            ADGF  KV QG E+ H TGYGGSGFKFNEEEDE R AAKKAQAKEYG EEDKS      +
Sbjct: 908  ADGFMVKVNQGLEQAHGTGYGGSGFKFNEEEDEKRIAAKKAQAKEYGFEEDKSDSEDEDE 967

Query: 488  GVRESS-------------------------------------LPTLGIPNVV--LLGAI 426
            G+R++                                      LP  G+P  +  ++G  
Sbjct: 968  GIRKAGGDISRHNAALAQQLVAIAAASKSTTSATPTPITAGQLLPPGGLPVSLPGVIGLT 1027

Query: 425  PSGPSTILATA----VDGDARGVALAAVTKLQQNLARIQAYTPSNRYETELEINDVPKNA 258
              GP+ ++  A    ++ D    A+AA   LQ NLA+IQA      YE ELEIND P+NA
Sbjct: 1028 IPGPAAVVPGAGLPVINNDNTAKAIAAAINLQHNLAKIQADAMPEHYEAELEINDFPQNA 1087

Query: 257  RWKVTHRETLGPISDWFGVTITTRGQYFPPGINPGPGEKKLYLFIEGPSEQSIKDARAAL 78
            RWKVTH+ETLGPISDW G  ITTRGQ+FPPG  PGPGE+KLYLFIEGPSE S+K A+A L
Sbjct: 1088 RWKVTHKETLGPISDWTGAAITTRGQFFPPGRIPGPGERKLYLFIEGPSETSVKKAKAEL 1147

Query: 77   KKTLLDITAQASSLPGSGQPGRY 9
            K+ L DIT QA SLPG  QPGRY
Sbjct: 1148 KRVLEDITNQALSLPGGAQPGRY 1170


>ref|XP_003517532.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Glycine max]
          Length = 1104

 Score =  678 bits (1750), Expect = 0.0
 Identities = 349/478 (73%), Positives = 394/478 (82%), Gaps = 18/478 (3%)
 Frame = -1

Query: 1388 SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVENTRPDRQTVLFSATFPRQVEVLAR 1209
            SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIV+N RPDRQTVLFSATFPRQVE+LAR
Sbjct: 625  SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 684

Query: 1208 KVLNNPVEIQVGGRSVVNKDITQLVEMRSESDRFLRLLQVLGEWYEKGKILVFVQSQDRC 1029
            KVLN PVEIQVGGRSVVNKDITQLVE+R +++RFLRLL++LGEWYEKGKIL+FV SQ++C
Sbjct: 685  KVLNKPVEIQVGGRSVVNKDITQLVEVRPDNERFLRLLEILGEWYEKGKILIFVHSQEKC 744

Query: 1028 DALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCSLLIATSIAARGLDVKELELVI 849
            D+LF+DLL+HGYPCLSLHGAKDQTDRESTISDFKSNVC+LL+ATSIAARGLDVKELELVI
Sbjct: 745  DSLFKDLLRHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVI 804

Query: 848  NFDVPNHYEDYVHRVGRTGRAGRKGVAITFISEEDARYAPNLVKALELSEQAVPDDLKAL 669
            NFDVPNHYEDYVHRVGRTGRAGRKG AITFISEE+ARYAP+L+KALELSEQ VP+DLKAL
Sbjct: 805  NFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEEARYAPDLLKALELSEQIVPNDLKAL 864

Query: 668  ADGFKAKVKQGTEKFHRTGYGGSGFKFNEEEDEVRKAAKKAQAKEYGVEEDKSXXXXXXD 489
            A  F AKV QG E+ H TGYGGSGFKFNEEEDEVRKAAKKAQAKEYG EE+KS      +
Sbjct: 865  AGSFMAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRKAAKKAQAKEYGFEEEKSDSEDEDE 924

Query: 488  GVRESS-------------LPTLG----IPNVVLLGAIPSGPSTIL-ATAVDGDARGVAL 363
            G+R++                T G    +P  +LL ++   P T L   A DG AR  A+
Sbjct: 925  GIRKAGGDISQHSAFAQIIAATKGNAPALPTPILLPSLQVLPGTGLPLPANDGAARAAAI 984

Query: 362  AAVTKLQQNLARIQAYTPSNRYETELEINDVPKNARWKVTHRETLGPISDWFGVTITTRG 183
            AA+  LQ  L +I++      YE ELEIND P+NARWKVTH+ETLGPIS+W G  ITTRG
Sbjct: 985  AAL-NLQDKLDKIRSEALPEHYEAELEINDFPQNARWKVTHKETLGPISEWSGAAITTRG 1043

Query: 182  QYFPPGINPGPGEKKLYLFIEGPSEQSIKDARAALKKTLLDITAQASSLPGSGQPGRY 9
            Q+FPPG  PGPGE+KLYLFIEGP+E S+K A+A LK+ L DIT QA  LPG  QPG+Y
Sbjct: 1044 QFFPPGKIPGPGERKLYLFIEGPTEHSVKSAKADLKRVLEDITNQALQLPGGTQPGKY 1101


>ref|XP_003537899.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Glycine max]
          Length = 1107

 Score =  678 bits (1749), Expect = 0.0
 Identities = 348/478 (72%), Positives = 394/478 (82%), Gaps = 18/478 (3%)
 Frame = -1

Query: 1388 SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVENTRPDRQTVLFSATFPRQVEVLAR 1209
            SSGKITNL RVTYLVMDEADRMFDMGFEPQITRIV+N RPDRQTVLFSATFPRQVE+LAR
Sbjct: 628  SSGKITNLHRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 687

Query: 1208 KVLNNPVEIQVGGRSVVNKDITQLVEMRSESDRFLRLLQVLGEWYEKGKILVFVQSQDRC 1029
            KVLN PVEIQVGGRSVVNKDITQLVE+R +++RFLRLL++LGEWYEKGKIL+FV SQ++C
Sbjct: 688  KVLNKPVEIQVGGRSVVNKDITQLVEVRPDNERFLRLLEILGEWYEKGKILIFVHSQEKC 747

Query: 1028 DALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCSLLIATSIAARGLDVKELELVI 849
            D+LF+DLL+HGYPCLSLHGAKDQTDRESTISDFKSNVC+LL+ATSIAARGLDVKELELVI
Sbjct: 748  DSLFKDLLRHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVI 807

Query: 848  NFDVPNHYEDYVHRVGRTGRAGRKGVAITFISEEDARYAPNLVKALELSEQAVPDDLKAL 669
            NFDVPNHYEDYVHRVGRTGRAGRKG AITFISEE+ARYAP+L+KALELSEQ VP+DLKAL
Sbjct: 808  NFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEEARYAPDLLKALELSEQTVPNDLKAL 867

Query: 668  ADGFKAKVKQGTEKFHRTGYGGSGFKFNEEEDEVRKAAKKAQAKEYGVEEDKSXXXXXXD 489
            A  F AKV QG E+ H TGYGGSGFKFNEEEDEVRKAAKKAQAKEYG EE+KS      +
Sbjct: 868  AGSFMAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRKAAKKAQAKEYGFEEEKSDSEDEDE 927

Query: 488  GVRESS-------------LPTLG----IPNVVLLGAIPSGPSTIL-ATAVDGDARGVAL 363
            G+R++                T G    +P  +LL ++P  P T L   A +G AR  A+
Sbjct: 928  GIRKAGGDISQHSAFAQIIAATKGNVPALPTPMLLPSLPVLPGTGLPLPANEGAARAAAI 987

Query: 362  AAVTKLQQNLARIQAYTPSNRYETELEINDVPKNARWKVTHRETLGPISDWFGVTITTRG 183
            AA+  LQ  L +I++      YE ELEIND P+NARWKVTH+ETLGPIS+W G  ITTRG
Sbjct: 988  AAL-NLQDKLDKIRSEALPEHYEAELEINDFPQNARWKVTHKETLGPISEWSGAAITTRG 1046

Query: 182  QYFPPGINPGPGEKKLYLFIEGPSEQSIKDARAALKKTLLDITAQASSLPGSGQPGRY 9
            Q+FPPG  PGPGE+KLYLFIEGP+E S+K A+A LK+ L DIT QA  LPG  QPG+Y
Sbjct: 1047 QFFPPGKIPGPGERKLYLFIEGPTEHSVKSAKADLKRVLEDITNQAMQLPGGTQPGKY 1104


>ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
            vinifera]
          Length = 1147

 Score =  676 bits (1744), Expect = 0.0
 Identities = 352/504 (69%), Positives = 396/504 (78%), Gaps = 44/504 (8%)
 Frame = -1

Query: 1388 SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVENTRPDRQTVLFSATFPRQVEVLAR 1209
            S GKITNLRRVTYLVMDEADRMFDMGFEPQITRIV+NTRPDRQTVLFSATFPRQVE+LAR
Sbjct: 640  SGGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEILAR 699

Query: 1208 KVLNNPVEIQVGGRSVVNKDITQLVEMRSESDRFLRLLQVLGEWYEKGKILVFVQSQDRC 1029
            +VLN PVEIQVGGRSVVNKDI+QLVE+R ES+RF RLL++LGEWYEKGKIL+FV SQ++C
Sbjct: 700  RVLNKPVEIQVGGRSVVNKDISQLVEVRPESERFFRLLELLGEWYEKGKILIFVHSQEKC 759

Query: 1028 DALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCSLLIATSIAARGLDVKELELVI 849
            D+LFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVC+LLIATS+AARGLDVKELELVI
Sbjct: 760  DSLFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSVAARGLDVKELELVI 819

Query: 848  NFDVPNHYEDYVHRVGRTGRAGRKGVAITFISEEDARYAPNLVKALELSEQAVPDDLKAL 669
            NFDVPNHYEDYVHRVGRTGRAGRKG AITFIS++DARYAP+LVKALELSEQ VPDDLKAL
Sbjct: 820  NFDVPNHYEDYVHRVGRTGRAGRKGSAITFISDDDARYAPDLVKALELSEQVVPDDLKAL 879

Query: 668  ADGFKAKVKQGTEKFHRTGYGGSGFKFNEEEDEVRKAAKKAQAKEYGVEEDKSXXXXXXD 489
            ADGF AKV QG E+ H TGYGGSGFKFNEEEDEVR+AAKKAQAKEYG EEDKS      +
Sbjct: 880  ADGFMAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSDDEDE 939

Query: 488  GVRESS-----------------------------------LPTLGIP-------NVVLL 435
            GVR++                                    LP  G+P        + + 
Sbjct: 940  GVRKAGGDISQQAALAQIAAIAAASKVGAVSMPSTVPAAQLLPNGGLPVSLSGVLGLTIP 999

Query: 434  GAIPSG-PSTIL-ATAVDGDARGVALAAVTKLQQNLARIQAYTPSNRYETELEINDVPKN 261
            G++ +  P ++L  T  DG AR  ALAA   LQ NLA+IQA      YE ELEIND P+N
Sbjct: 1000 GSVAAAVPGSVLPMTPNDGAARAAALAAAINLQHNLAKIQADAMPEHYEAELEINDFPQN 1059

Query: 260  ARWKVTHRETLGPISDWFGVTITTRGQYFPPGINPGPGEKKLYLFIEGPSEQSIKDARAA 81
            ARW+VTH++TL PIS+W G  ITTRGQY+  G  PGPGE+KLYLFIEGP+EQS+K A+A 
Sbjct: 1060 ARWRVTHKDTLIPISEWTGAAITTRGQYYTTGKVPGPGERKLYLFIEGPTEQSVKRAKAE 1119

Query: 80   LKKTLLDITAQASSLPGSGQPGRY 9
            LK+ L D T QA S P + QPG+Y
Sbjct: 1120 LKRVLEDFTIQAISNPSAVQPGKY 1143


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