BLASTX nr result

ID: Cnidium21_contig00015720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015720
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282909.2| PREDICTED: glutamate receptor 2.7-like [Viti...   266   3e-69
emb|CBI20225.3| unnamed protein product [Vitis vinifera]              266   3e-69
ref|XP_002300409.1| glutamate-gated kainate-type ion channel rec...   244   2e-62
ref|XP_002518390.1| glutamate receptor 2 plant, putative [Ricinu...   243   5e-62
ref|XP_002282943.2| PREDICTED: glutamate receptor 2.7-like [Viti...   241   1e-61

>ref|XP_002282909.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 1452

 Score =  266 bits (681), Expect = 3e-69
 Identities = 134/258 (51%), Positives = 179/258 (69%)
 Frame = +1

Query: 1    PHATSLSEQLMRLKRDQCRVFVVHTSLKLATHLFQEAEQMLMIEKDYVWITTNTISDLLY 180
            P A+SLS++L  LK++QCRVFVVH+SL  ATH+FQ+A QM MIEK YVWIT +TI+ L +
Sbjct: 810  PFASSLSKELTSLKKEQCRVFVVHSSLSFATHMFQQANQMGMIEKGYVWITMDTITSLAH 869

Query: 181  SVNHTTILSMQGVIGVKRHFPEISSKFVEFKKRFRLKFSVEYPEEDNNEPGISAVEAYDT 360
            S+N +TI +MQGV+GVK +F E   KF +F  RFR KFS+E+PEE+N+E GI AV+AYD 
Sbjct: 870  SLNASTISTMQGVVGVKSYFNETEPKFQDFYVRFRKKFSLEHPEEENHELGIFAVQAYDA 929

Query: 361  MWVVATTLAKMNNQITNRSQLFLEKVYLTDLSGITGRVHAIGRKLESSHVFGVVNVIGKS 540
            +W VA  L   N       Q  LE++ LT   G+TG V   GR++     F +VN+IG+S
Sbjct: 930  IWTVAQALVGNN----LGGQHILEQISLTSFHGLTGLVEFTGRRIAPLRRFQIVNMIGRS 985

Query: 541  YRELGIWTEKLGFSKHTVDRAIYNSSMKNLGQLFWPGESMHAPKGWSVPSSTDSLKIGVP 720
            YRELG WT + GF+    ++  YN SM+ LGQ+FWPG     P GW++PSS  +LKIGVP
Sbjct: 986  YRELGFWTSESGFTDTMDEKLDYNPSMRTLGQVFWPGGPWSIPTGWTLPSSYKTLKIGVP 1045

Query: 721  AESMFRQFVDTVYDPQTN 774
              S+F+ FV+ +YD + N
Sbjct: 1046 IGSVFKFFVNPMYDSENN 1063


>emb|CBI20225.3| unnamed protein product [Vitis vinifera]
          Length = 1391

 Score =  266 bits (681), Expect = 3e-69
 Identities = 134/258 (51%), Positives = 179/258 (69%)
 Frame = +1

Query: 1    PHATSLSEQLMRLKRDQCRVFVVHTSLKLATHLFQEAEQMLMIEKDYVWITTNTISDLLY 180
            P A+SLS++L  LK++QCRVFVVH+SL  ATH+FQ+A QM MIEK YVWIT +TI+ L +
Sbjct: 746  PFASSLSKELTSLKKEQCRVFVVHSSLSFATHMFQQANQMGMIEKGYVWITMDTITSLAH 805

Query: 181  SVNHTTILSMQGVIGVKRHFPEISSKFVEFKKRFRLKFSVEYPEEDNNEPGISAVEAYDT 360
            S+N +TI +MQGV+GVK +F E   KF +F  RFR KFS+E+PEE+N+E GI AV+AYD 
Sbjct: 806  SLNASTISTMQGVVGVKSYFNETEPKFQDFYVRFRKKFSLEHPEEENHELGIFAVQAYDA 865

Query: 361  MWVVATTLAKMNNQITNRSQLFLEKVYLTDLSGITGRVHAIGRKLESSHVFGVVNVIGKS 540
            +W VA  L   N       Q  LE++ LT   G+TG V   GR++     F +VN+IG+S
Sbjct: 866  IWTVAQALVGNN----LGGQHILEQISLTSFHGLTGLVEFTGRRIAPLRRFQIVNMIGRS 921

Query: 541  YRELGIWTEKLGFSKHTVDRAIYNSSMKNLGQLFWPGESMHAPKGWSVPSSTDSLKIGVP 720
            YRELG WT + GF+    ++  YN SM+ LGQ+FWPG     P GW++PSS  +LKIGVP
Sbjct: 922  YRELGFWTSESGFTDTMDEKLDYNPSMRTLGQVFWPGGPWSIPTGWTLPSSYKTLKIGVP 981

Query: 721  AESMFRQFVDTVYDPQTN 774
              S+F+ FV+ +YD + N
Sbjct: 982  IGSVFKFFVNPMYDSENN 999



 Score =  200 bits (509), Expect = 3e-49
 Identities = 105/243 (43%), Positives = 153/243 (62%), Gaps = 1/243 (0%)
 Frame = +1

Query: 37  LKRDQCRVFVVHTSLKLATHLFQEAEQMLMIEKDYVWITTNTISDLLYSVNHTTI-LSMQ 213
           LK  QCRVFVVHTSL+L  HLF+ A++M M+++ Y+WI T+TIS L++S+  +TI  SM 
Sbjct: 8   LKEGQCRVFVVHTSLQLGVHLFETAKKMEMMKEGYIWIITDTISSLVHSIKASTISSSMD 67

Query: 214 GVIGVKRHFPEISSKFVEFKKRFRLKFSVEYPEEDNNEPGISAVEAYDTMWVVATTLAKM 393
           G++GVK +F E + +F  F+ RFR  F   +P+E+ NEPGI A +AYD  W  A  LA  
Sbjct: 68  GIVGVKSYFNENTPQFKIFRGRFRRMFISVHPDEEKNEPGIYAAKAYDATW--AAALAMT 125

Query: 394 NNQITNRSQLFLEKVYLTDLSGITGRVHAIGRKLESSHVFGVVNVIGKSYRELGIWTEKL 573
             + T   Q  LEK+      G+TG++    +KL  +H+F +VNV+GKS RELG W+E  
Sbjct: 126 GGRGT--GQQLLEKISNGQFDGLTGKIQFSDQKLAPAHIFQIVNVVGKSDRELGFWSET- 182

Query: 574 GFSKHTVDRAIYNSSMKNLGQLFWPGESMHAPKGWSVPSSTDSLKIGVPAESMFRQFVDT 753
                + + + +    + L Q+ WPG   + P+GW+ P+    LKIGVP+ S F+QFV+ 
Sbjct: 183 -----SEEESGFWRDRRALAQVVWPGGPRNTPRGWTPPTDEKPLKIGVPSGSTFKQFVEV 237

Query: 754 VYD 762
           + D
Sbjct: 238 IQD 240


>ref|XP_002300409.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222847667|gb|EEE85214.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 782

 Score =  244 bits (622), Expect = 2e-62
 Identities = 119/254 (46%), Positives = 169/254 (66%)
 Frame = +1

Query: 13  SLSEQLMRLKRDQCRVFVVHTSLKLATHLFQEAEQMLMIEKDYVWITTNTISDLLYSVNH 192
           SLS +L  LKR+QCRVFVVH SL LA  LF+ A+++ M+EKDYVWITT+ I+ L++S++ 
Sbjct: 162 SLSRELKNLKREQCRVFVVHLSLPLAVRLFEMAKKLKMMEKDYVWITTHHITSLVHSIDA 221

Query: 193 TTILSMQGVIGVKRHFPEISSKFVEFKKRFRLKFSVEYPEEDNNEPGISAVEAYDTMWVV 372
           + I SMQG++GVK +F E  ++F +F  RFR +F  E PEE+NNEPGI AV+AYD +W +
Sbjct: 222 SIISSMQGIVGVKSYFSETGTRFQDFSSRFRKRFRRENPEEENNEPGIYAVQAYDAIWTI 281

Query: 373 ATTLAKMNNQITNRSQLFLEKVYLTDLSGITGRVHAIGRKLESSHVFGVVNVIGKSYREL 552
           A  L   N     R+Q  LEKV  TD  G++G+V     K+  + +F ++NV+GKSYREL
Sbjct: 282 ARALKGSN----RRNQELLEKVLQTDFQGLSGKVQFNNHKMAPTQMFQIINVVGKSYREL 337

Query: 553 GIWTEKLGFSKHTVDRAIYNSSMKNLGQLFWPGESMHAPKGWSVPSSTDSLKIGVPAESM 732
           G W+  LGFS+     A Y+  M +L Q+ WPG   + P+GW+  +    L +GVPA+S 
Sbjct: 338 GFWSSGLGFSETIGKHATYSPLMNDLEQVLWPGGPRYTPRGWTELTREKPLLVGVPAKSG 397

Query: 733 FRQFVDTVYDPQTN 774
           ++++V   YD   N
Sbjct: 398 YKEYVKVEYDRSGN 411


>ref|XP_002518390.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223542485|gb|EEF44026.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 862

 Score =  243 bits (619), Expect = 5e-62
 Identities = 121/248 (48%), Positives = 174/248 (70%), Gaps = 1/248 (0%)
 Frame = +1

Query: 7   ATSLSEQLMRLKRDQCRVFVVHTSLKLATHLFQEAEQMLMIEKDYVWITTNTISDLLYSV 186
           ++SLSE L  LK++ CRVFVVH SL LA  L++ A++M M+E+DYVWITT+  + L++S+
Sbjct: 204 SSSLSEDLEGLKQEDCRVFVVHASLSLAVRLYERAKEMNMMEEDYVWITTDPFTSLVHSI 263

Query: 187 NHTTILSMQGVIGVKRHFPEISSKFVEFKKRFRLKFSVEYPEEDNNEPGISAVEAYDTMW 366
           N + I SMQG++GVK + PE    F +F  RFR +F+ +YPEE+N++PGI AV+AYD + 
Sbjct: 264 NSSIISSMQGIVGVKSYLPEAGQYFQDFYNRFRSRFNRQYPEENNSDPGIFAVQAYDAIR 323

Query: 367 VVATTLAKMNNQITNRSQLFLEKVYLTDLSGITGRVHAIGRKLESSHVFGVVNVIGK-SY 543
           +VA    + N     R +  LE+V LTD  G++G+V  I  K   ++ F ++NV+GK SY
Sbjct: 324 MVALATHEGN----YRGKDLLERVLLTDFHGLSGKVQFINMKAAPAYRFQIINVVGKLSY 379

Query: 544 RELGIWTEKLGFSKHTVDRAIYNSSMKNLGQLFWPGESMHAPKGWSVPSSTDSLKIGVPA 723
           RELG W+  LGFSK   D A  +SSM +LG + WPG S H P+GWS+P+S++ LKIGVPA
Sbjct: 380 RELGFWSNGLGFSKTIDDGATRSSSMDDLGPVIWPGGSRHTPRGWSLPTSSNPLKIGVPA 439

Query: 724 ESMFRQFV 747
            S ++++V
Sbjct: 440 GSGYKEYV 447


>ref|XP_002282943.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 886

 Score =  241 bits (616), Expect = 1e-61
 Identities = 127/257 (49%), Positives = 173/257 (67%)
 Frame = +1

Query: 4   HATSLSEQLMRLKRDQCRVFVVHTSLKLATHLFQEAEQMLMIEKDYVWITTNTISDLLYS 183
           +++SLS+QL RLK  Q +VFVVH+SL +A  LF +A ++ M+EK  VWITT++I++L++S
Sbjct: 202 NSSSLSDQLQRLKGKQSQVFVVHSSLSMAERLFSKANELGMMEKGSVWITTDSITNLVHS 261

Query: 184 VNHTTILSMQGVIGVKRHFPEISSKFVEFKKRFRLKFSVEYPEEDNNEPGISAVEAYDTM 363
           +N + I SM+GV+G+K  F E  ++F +F  RFR KF   YP+EDN EPGI AV AYD +
Sbjct: 262 MNSSVISSMEGVLGMKSFFQEDGARFQDFYSRFRQKFRSLYPKEDNYEPGIFAVRAYDAV 321

Query: 364 WVVATTLAKMNNQITNRSQLFLEKVYLTDLSGITGRVHAIGRKLESSHVFGVVNVIGKSY 543
           W VA  LA  NN  T   Q  LEK+ L+D  G+T R+    R+L    +F +VNVIGKSY
Sbjct: 322 WSVA--LAMDNNGST---QQLLEKIELSDFHGLTNRIKFERRRLAPQRMFQIVNVIGKSY 376

Query: 544 RELGIWTEKLGFSKHTVDRAIYNSSMKNLGQLFWPGESMHAPKGWSVPSSTDSLKIGVPA 723
           RELG W+E  GF+K T  +   +SSM  LGQ+FWPG     P+GW++P+S   L+IGVP 
Sbjct: 377 RELGFWSEGSGFAKPTNGQIQNSSSMDILGQVFWPGGPTSTPRGWALPTSETPLRIGVPL 436

Query: 724 ESMFRQFVDTVYDPQTN 774
            + F+QFV   YD   N
Sbjct: 437 NATFKQFVSVTYDDGGN 453


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