BLASTX nr result

ID: Cnidium21_contig00015668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015668
         (1017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG16531.1| putative zinc finger family protein [Capsicum ch...   171   2e-40
ref|XP_002320810.1| predicted protein [Populus trichocarpa] gi|2...   169   1e-39
ref|XP_002302595.1| predicted protein [Populus trichocarpa] gi|2...   169   1e-39
emb|CAN61521.1| hypothetical protein VITISV_010800 [Vitis vinifera]   169   1e-39
ref|XP_002278589.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   167   3e-39

>dbj|BAG16531.1| putative zinc finger family protein [Capsicum chinense]
          Length = 191

 Score =  171 bits (434), Expect = 2e-40
 Identities = 87/165 (52%), Positives = 111/165 (67%), Gaps = 7/165 (4%)
 Frame = +1

Query: 1   PPPEEHRSLTSHDSAAVARATGFMVDLNLDASSPDTFQRPPTPIPFDVVLGYPHSTGGII 180
           P  EE+ SLTS DSAA A  +  + DLNLD S+PDT++ PP PIPF+VVLG+P S G   
Sbjct: 25  PASEEYESLTSDDSAATAFTSDLLDDLNLDRSTPDTYRAPPAPIPFEVVLGHPQSRGSQF 84

Query: 181 SGSSLQKGSYV-----NRKNLDCKVQAGGL-ASPRKFGVELSKLIDADISETEEE-VCPT 339
           +  ++ + SY      + K  DCK +   L AS +K G++L K     I   EEE VCPT
Sbjct: 85  TDETVLQHSYEITTCKDIKLSDCKTETESLLASLKKTGIDLVKSTSPIIKSAEEEDVCPT 144

Query: 340 CFEDYNAENPKIITKCNHHFHLSCILEWMERSDTCPMCNQVCILE 474
           C E+Y+A+NP+I+ KCNHHFHLSCILEWMERS TCP+C+Q  I E
Sbjct: 145 CLEEYDADNPRIVAKCNHHFHLSCILEWMERSQTCPICDQEMIYE 189


>ref|XP_002320810.1| predicted protein [Populus trichocarpa] gi|222861583|gb|EEE99125.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score =  169 bits (427), Expect = 1e-39
 Identities = 87/165 (52%), Positives = 110/165 (66%), Gaps = 8/165 (4%)
 Frame = +1

Query: 1   PPPEEHRSLTSHDSAAVARATGFMVDLNLDASSPDTFQRPPTPIPFDVVLGYPHSTGGII 180
           P  EEH SLTSH+ AA A   G +V+L+L+ S+PDTF+ PP P+P+DV+LG P S     
Sbjct: 24  PALEEHGSLTSHNGAASAFTAGLLVELHLNTSTPDTFRPPPAPLPYDVILGCPQSPFSES 83

Query: 181 SGSSLQKGSY------VNRKNLDCKVQAGGL-ASPRKFGVELSKLIDADISETEEE-VCP 336
              ++ +GS+       +   LDC+ QA  L  SPRK   E++KL +   S TEEE  CP
Sbjct: 84  VQETISRGSFGTLATCEDLDELDCETQASSLLVSPRKS--EVTKLHEPVASATEEEDACP 141

Query: 337 TCFEDYNAENPKIITKCNHHFHLSCILEWMERSDTCPMCNQVCIL 471
            C E+Y+ ENPK IT C HHFHLSCILEWMERSDTCP+C+QVC L
Sbjct: 142 ICLEEYDLENPKHITNCEHHFHLSCILEWMERSDTCPICDQVCFL 186


>ref|XP_002302595.1| predicted protein [Populus trichocarpa] gi|222844321|gb|EEE81868.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  169 bits (427), Expect = 1e-39
 Identities = 90/164 (54%), Positives = 108/164 (65%), Gaps = 7/164 (4%)
 Frame = +1

Query: 1   PPPEEHRSLTSHDSAAVARATGFMVDLNLDASSPDTFQRPPTPIPFDVVLGYPHSTGG-- 174
           P  EEH SLTSH+ AA A   G +V+LNL+ S+PDTF  PP P+P+DVVLG P S     
Sbjct: 24  PALEEHVSLTSHNVAASAFTAGLLVELNLNTSTPDTFHPPPVPLPYDVVLGCPQSPDSES 83

Query: 175 ---IISGSSLQK-GSYVNRKNLDCKVQAGG-LASPRKFGVELSKLIDADISETEEEVCPT 339
              IIS SS +   +  + + LDCK  A   L SPRK  V+  K  +   S TEE+ CP 
Sbjct: 84  VREIISRSSFETLATCEDLEELDCKTHASSFLFSPRKSDVK--KFHEPVASATEEDACPI 141

Query: 340 CFEDYNAENPKIITKCNHHFHLSCILEWMERSDTCPMCNQVCIL 471
           C E Y+ ENPK ITKC HHFHLSCILEWMERSD CP+C+QVC+L
Sbjct: 142 CLEAYDLENPKHITKCEHHFHLSCILEWMERSDICPICDQVCLL 185


>emb|CAN61521.1| hypothetical protein VITISV_010800 [Vitis vinifera]
          Length = 177

 Score =  169 bits (427), Expect = 1e-39
 Identities = 90/164 (54%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
 Frame = +1

Query: 1   PPPEEHRSLTSHDSAAVARATGFMVDLNLDASSPDTFQRPPTPIPFDVVLGYPHST---- 168
           P  +EH  LTSH+ AA A A   +VDLNL  S PDT++ PP PIP+DVVLG+P ST    
Sbjct: 17  PTLQEHEFLTSHBGAASAFAAELLVDLNLQTSIPDTYRPPPAPIPYDVVLGHPRSTDCDP 76

Query: 169 -GGIISGSSLQKGSYVNRKNLDCKVQAGGL-ASPRKFGVELSKLIDADISETEEEVCPTC 342
            G  I+GS   KG  V+    DCK QA  L  SPRKF + +S   +  +   E++ CP C
Sbjct: 77  VGETINGS---KGLRVS----DCKTQASSLPTSPRKFELPISNEPNF-LPLEEDDACPIC 128

Query: 343 FEDYNAENPKIITKCNHHFHLSCILEWMERSDTCPMCNQVCILE 474
            E+Y+ ENPK ITKCNHHFHLSCILEWMERS+TCP+C+Q  ILE
Sbjct: 129 LEEYDLENPKTITKCNHHFHLSCILEWMERSETCPVCDQEMILE 172


>ref|XP_002278589.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Vitis vinifera]
           gi|297745359|emb|CBI40439.3| unnamed protein product
           [Vitis vinifera]
          Length = 184

 Score =  167 bits (424), Expect = 3e-39
 Identities = 90/164 (54%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
 Frame = +1

Query: 1   PPPEEHRSLTSHDSAAVARATGFMVDLNLDASSPDTFQRPPTPIPFDVVLGYPHST---- 168
           P  +EH  LTSH+ AA A A   +VDLNL  S PDT++ PP PIP+DVVLG+P ST    
Sbjct: 24  PTLQEHEFLTSHNGAASAFAAELLVDLNLQTSIPDTYRPPPAPIPYDVVLGHPRSTDCDP 83

Query: 169 -GGIISGSSLQKGSYVNRKNLDCKVQAGGL-ASPRKFGVELSKLIDADISETEEEVCPTC 342
            G  I+GS   KG  V+    DCK QA  L  SPRKF + +S   +  +   E++ CP C
Sbjct: 84  VGETINGS---KGLRVS----DCKTQASSLPTSPRKFELPISNEPNF-LPLEEDDACPIC 135

Query: 343 FEDYNAENPKIITKCNHHFHLSCILEWMERSDTCPMCNQVCILE 474
            E+Y+ ENPK ITKCNHHFHLSCILEWMERS+TCP+C+Q  ILE
Sbjct: 136 LEEYDLENPKTITKCNHHFHLSCILEWMERSETCPVCDQEMILE 179


Top