BLASTX nr result

ID: Cnidium21_contig00015657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015657
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14940.3| unnamed protein product [Vitis vinifera]              226   5e-57
ref|XP_002277262.1| PREDICTED: uncharacterized protein LOC100255...   226   5e-57
ref|XP_002511309.1| 50S ribosomal protein L19, putative [Ricinus...   213   6e-53
ref|XP_004160907.1| PREDICTED: 50S ribosomal protein L19, chloro...   212   7e-53
ref|XP_004139446.1| PREDICTED: 50S ribosomal protein L19, chloro...   212   7e-53

>emb|CBI14940.3| unnamed protein product [Vitis vinifera]
          Length = 270

 Score =  226 bits (576), Expect = 5e-57
 Identities = 119/164 (72%), Positives = 134/164 (81%), Gaps = 1/164 (0%)
 Frame = +3

Query: 57  VDYRSSSWSGSLVAMKSTIPSRCITMMGNSGSDLKDN-LDPLPDVVPRIKFKRLDKTTRN 233
           +D  S S      A   T PSRCIT   N  S  +D+   P+ D+ PRIKFKRLDKT+++
Sbjct: 101 LDRSSRSGLFQWTAAMPTFPSRCITTTVNPISASQDSSAAPVSDLAPRIKFKRLDKTSKH 160

Query: 234 IMQILDKEAVEEVKARREIPEIKPGYIIQLKVETPENKRRISTLKGIVIARRNAGLNTTI 413
           IMQILDKEAVEEV+A+REIPEIKPGYI+QLKVE PENKRR S LKGIVIARRNAGLNTT 
Sbjct: 161 IMQILDKEAVEEVRAKREIPEIKPGYIVQLKVEVPENKRRTSVLKGIVIARRNAGLNTTF 220

Query: 414 RLRRLITGIGVESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDR 545
           RLRRL+ G+GVESLFPLYSP+IKEIKVLDKKKVRRAKLYYLRD+
Sbjct: 221 RLRRLVAGVGVESLFPLYSPSIKEIKVLDKKKVRRAKLYYLRDK 264


>ref|XP_002277262.1| PREDICTED: uncharacterized protein LOC100255272 [Vitis vinifera]
          Length = 243

 Score =  226 bits (576), Expect = 5e-57
 Identities = 119/164 (72%), Positives = 134/164 (81%), Gaps = 1/164 (0%)
 Frame = +3

Query: 57  VDYRSSSWSGSLVAMKSTIPSRCITMMGNSGSDLKDN-LDPLPDVVPRIKFKRLDKTTRN 233
           +D  S S      A   T PSRCIT   N  S  +D+   P+ D+ PRIKFKRLDKT+++
Sbjct: 74  LDRSSRSGLFQWTAAMPTFPSRCITTTVNPISASQDSSAAPVSDLAPRIKFKRLDKTSKH 133

Query: 234 IMQILDKEAVEEVKARREIPEIKPGYIIQLKVETPENKRRISTLKGIVIARRNAGLNTTI 413
           IMQILDKEAVEEV+A+REIPEIKPGYI+QLKVE PENKRR S LKGIVIARRNAGLNTT 
Sbjct: 134 IMQILDKEAVEEVRAKREIPEIKPGYIVQLKVEVPENKRRTSVLKGIVIARRNAGLNTTF 193

Query: 414 RLRRLITGIGVESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDR 545
           RLRRL+ G+GVESLFPLYSP+IKEIKVLDKKKVRRAKLYYLRD+
Sbjct: 194 RLRRLVAGVGVESLFPLYSPSIKEIKVLDKKKVRRAKLYYLRDK 237


>ref|XP_002511309.1| 50S ribosomal protein L19, putative [Ricinus communis]
           gi|223550424|gb|EEF51911.1| 50S ribosomal protein L19,
           putative [Ricinus communis]
          Length = 190

 Score =  213 bits (541), Expect = 6e-53
 Identities = 108/160 (67%), Positives = 131/160 (81%), Gaps = 2/160 (1%)
 Frame = +3

Query: 72  SSWSGSLVAMKSTIPSRCITMMGNSGSDLKDNLDPLP--DVVPRIKFKRLDKTTRNIMQI 245
           S  +GS   +  + P R +   GNS + L   +  +P  D  P+IKFKRLDKT R+IMQI
Sbjct: 25  SKGNGSSAGLSFSFPIRNMITTGNS-TKLPSTVSSVPTTDAAPKIKFKRLDKTARHIMQI 83

Query: 246 LDKEAVEEVKARREIPEIKPGYIIQLKVETPENKRRISTLKGIVIARRNAGLNTTIRLRR 425
           LDKE+V+EVKA++E+P+I+PGYI+QLKVE PENKRR+S +KGIVIARRNAGLNTT RLRR
Sbjct: 84  LDKESVQEVKAQKEMPDIRPGYIVQLKVEVPENKRRVSIVKGIVIARRNAGLNTTFRLRR 143

Query: 426 LITGIGVESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDR 545
           L+ G+GVESLFPLYSPNIKEI+VLDKKKVRRAKLYYLRD+
Sbjct: 144 LVAGVGVESLFPLYSPNIKEIRVLDKKKVRRAKLYYLRDK 183


>ref|XP_004160907.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Cucumis
           sativus]
          Length = 189

 Score =  212 bits (540), Expect = 7e-53
 Identities = 107/133 (80%), Positives = 121/133 (90%)
 Frame = +3

Query: 147 GSDLKDNLDPLPDVVPRIKFKRLDKTTRNIMQILDKEAVEEVKARREIPEIKPGYIIQLK 326
           GS   D++ P     PRIKFKRLDKT+R+IMQILDKEAVEEVKARREIP+IKPGYI+QLK
Sbjct: 55  GSPAVDSVIP-----PRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPDIKPGYIVQLK 109

Query: 327 VETPENKRRISTLKGIVIARRNAGLNTTIRLRRLITGIGVESLFPLYSPNIKEIKVLDKK 506
           VE PENKRRISTLKGIVIARRNAGLN+T R+RR++ G+G+ESLFPLYSPNIKEIKVL+KK
Sbjct: 110 VEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKK 169

Query: 507 KVRRAKLYYLRDR 545
           KVRRAKLYYLRD+
Sbjct: 170 KVRRAKLYYLRDK 182


>ref|XP_004139446.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Cucumis
           sativus]
          Length = 269

 Score =  212 bits (540), Expect = 7e-53
 Identities = 107/133 (80%), Positives = 121/133 (90%)
 Frame = +3

Query: 147 GSDLKDNLDPLPDVVPRIKFKRLDKTTRNIMQILDKEAVEEVKARREIPEIKPGYIIQLK 326
           GS   D++ P     PRIKFKRLDKT+R+IMQILDKEAVEEVKARREIP+IKPGYI+QLK
Sbjct: 135 GSPAVDSVIP-----PRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPDIKPGYIVQLK 189

Query: 327 VETPENKRRISTLKGIVIARRNAGLNTTIRLRRLITGIGVESLFPLYSPNIKEIKVLDKK 506
           VE PENKRRISTLKGIVIARRNAGLN+T R+RR++ G+G+ESLFPLYSPNIKEIKVL+KK
Sbjct: 190 VEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKK 249

Query: 507 KVRRAKLYYLRDR 545
           KVRRAKLYYLRD+
Sbjct: 250 KVRRAKLYYLRDK 262


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