BLASTX nr result

ID: Cnidium21_contig00015650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015650
         (1493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]    68   7e-09
gb|ABA97402.1| retrotransposon protein, putative, unclassified [...    65   4e-08
gb|EEE62873.1| hypothetical protein OsJ_17676 [Oryza sativa Japo...    65   4e-08
gb|ABF96573.1| retrotransposon protein, putative, unclassified, ...    64   8e-08
gb|AAO37507.1| retrotransposon protein, putative, unclassified [...    64   8e-08

>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score = 67.8 bits (164), Expect = 7e-09
 Identities = 41/106 (38%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
 Frame = +3

Query: 930  NPFAKTEPIIREPVK-------PLQHLKLTFPSFKEGDDVTSWIQDCEQYFSVFQIGENK 1088
            NPFA+ E       +       P QHLKL+FP F  GDD T WI   EQYF    I   +
Sbjct: 57   NPFARDESSHPHTARSNTINDHPHQHLKLSFPKFN-GDDPTGWIYKAEQYFDFMNITPGQ 115

Query: 1089 KTAIAGMHLTGIARRWFEVYIIGRENHSWHEFQVAFIARFGSWNQE 1226
            +  +A  HL GIA +W       R   +W EF  A   RFG  + E
Sbjct: 116  QVQLASFHLEGIALQWHRWLTKFRGPLTWDEFTKAVQLRFGPTDYE 161


>gb|ABA97402.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 692

 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 34/105 (32%), Positives = 59/105 (56%)
 Frame = +3

Query: 930  NPFAKTEPIIREPVKPLQHLKLTFPSFKEGDDVTSWIQDCEQYFSVFQIGENKKTAIAGM 1109
            +P  +  P   +P K  +++   FP+F EGD + SWI+  E+YFS++Q  E  K  +A +
Sbjct: 171  HPHYEHRPHYADPAKRSRNVD--FPTF-EGDYLESWIRKAEKYFSLYQTPEEDKVLLAEV 227

Query: 1110 HLTGIARRWFEVYIIGRENHSWHEFQVAFIARFGSWNQEQLIDNF 1244
            H++G A +W E   I   + SW EF+     RF + ++ ++ + F
Sbjct: 228  HISGRADQWIESLAIATASLSWPEFKTMLCQRFAAKSKIEITETF 272


>gb|EEE62873.1| hypothetical protein OsJ_17676 [Oryza sativa Japonica Group]
          Length = 463

 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 34/105 (32%), Positives = 59/105 (56%)
 Frame = +3

Query: 930  NPFAKTEPIIREPVKPLQHLKLTFPSFKEGDDVTSWIQDCEQYFSVFQIGENKKTAIAGM 1109
            +P  +  P   +P K  +++   FP+F EGD + SWI+  E+YFS++Q  E  K  +A +
Sbjct: 171  HPHYEHRPHYADPAKRSRNVD--FPTF-EGDYLESWIRKAEKYFSLYQTPEEDKVLLAEV 227

Query: 1110 HLTGIARRWFEVYIIGRENHSWHEFQVAFIARFGSWNQEQLIDNF 1244
            H++G A +W E   I   + SW EF+     RF + ++ ++ + F
Sbjct: 228  HISGRADQWIESLAIATASLSWPEFKTMLCQRFAAKSKIEITETF 272


>gb|ABF96573.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1481

 Score = 64.3 bits (155), Expect = 8e-08
 Identities = 28/73 (38%), Positives = 45/73 (61%)
 Frame = +3

Query: 990  KLTFPSFKEGDDVTSWIQDCEQYFSVFQIGENKKTAIAGMHLTGIARRWFEVYIIGRENH 1169
            K+ FP F +G DV  W+  CE YF ++QI +N K + A +H++G A +W+  Y +  E +
Sbjct: 575  KMDFPRF-DGSDVRIWLDMCETYFDMYQITQNFKVSAAVLHMSGNAAQWYHSYKLVNEVN 633

Query: 1170 SWHEFQVAFIARF 1208
            SW +F++A    F
Sbjct: 634  SWDQFRMAVATEF 646


>gb|AAO37507.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1155

 Score = 64.3 bits (155), Expect = 8e-08
 Identities = 28/73 (38%), Positives = 45/73 (61%)
 Frame = +3

Query: 990  KLTFPSFKEGDDVTSWIQDCEQYFSVFQIGENKKTAIAGMHLTGIARRWFEVYIIGRENH 1169
            K+ FP F +G DV  W+  CE YF ++QI +N K + A +H++G A +W+  Y +  E +
Sbjct: 121  KMDFPRF-DGSDVRIWLDMCETYFDMYQITQNFKVSAAVLHMSGNAAQWYHSYKLVNEVN 179

Query: 1170 SWHEFQVAFIARF 1208
            SW +F++A    F
Sbjct: 180  SWDQFRMAVATEF 192


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