BLASTX nr result

ID: Cnidium21_contig00015621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015621
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172900.1| PREDICTED: paired amphipathic helix protein ...    96   4e-18
ref|XP_004143788.1| PREDICTED: paired amphipathic helix protein ...    96   4e-18
ref|XP_003551998.1| PREDICTED: paired amphipathic helix protein ...    94   2e-17
ref|XP_003613438.1| Paired amphipathic helix protein Sin3 [Medic...    94   2e-17
gb|ACJ86302.1| unknown [Medicago truncatula]                           94   2e-17

>ref|XP_004172900.1| PREDICTED: paired amphipathic helix protein Sin3-like 3-like
           [Cucumis sativus]
          Length = 492

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 53/92 (57%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
 Frame = -3

Query: 569 GIALTRNKRKFACEDEISVTSQALEELQIFNGLECKISCNSYKVSYVLDTEDVFYRIK-R 393
           GI L RNK K AC DEIS   +A+E L++ NGLECKI+CNS KVSYVLDTED  +R K R
Sbjct: 398 GIYLHRNKCKHACSDEISAACEAMEGLKVVNGLECKITCNSSKVSYVLDTEDYLFRTKGR 457

Query: 392 RRTNHLSRSNR-DQANPSNASSARAERFNRLL 300
           RR+ H S S R  Q+  S+ SS+R +R+ R L
Sbjct: 458 RRSLHRSGSCRHHQSRSSSGSSSRGQRYQRWL 489


>ref|XP_004143788.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Cucumis
            sativus]
          Length = 1394

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 53/92 (57%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
 Frame = -3

Query: 569  GIALTRNKRKFACEDEISVTSQALEELQIFNGLECKISCNSYKVSYVLDTEDVFYRIK-R 393
            GI L RNK K AC DEIS   +A+E L++ NGLECKI+CNS KVSYVLDTED  +R K R
Sbjct: 1300 GIYLHRNKCKHACSDEISAACEAMEGLKVVNGLECKITCNSSKVSYVLDTEDYLFRTKGR 1359

Query: 392  RRTNHLSRSNR-DQANPSNASSARAERFNRLL 300
            RR+ H S S R  Q+  S+ SS+R +R+ R L
Sbjct: 1360 RRSLHRSGSCRHHQSRSSSGSSSRGQRYQRWL 1391


>ref|XP_003551998.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Glycine
            max]
          Length = 1367

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 54/90 (60%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
 Frame = -3

Query: 569  GIALTRNKRKFACEDEISVTSQALEELQIFNGLECKISCNSYKVSYVLDTEDVFYRIKR- 393
            GI L RNKRK+A  DE S  SQ L+ L+I NGLECKI CNS KVSYVLDTED  +R +R 
Sbjct: 1277 GIYLKRNKRKYAISDEYS--SQTLDGLEIINGLECKIVCNSSKVSYVLDTEDFLHRTRRK 1334

Query: 392  RRTNHLSRSNRDQANPSNASSARAERFNRL 303
            RRT H S S  +QA  S   S+RA+RF +L
Sbjct: 1335 RRTLHQSSSCHEQAKSSIICSSRAQRFCKL 1364


>ref|XP_003613438.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
            gi|355514773|gb|AES96396.1| Paired amphipathic helix
            protein Sin3 [Medicago truncatula]
          Length = 1513

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 51/90 (56%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
 Frame = -3

Query: 569  GIALTRNKRKFACEDEISVTSQALEELQIFNGLECKISCNSYKVSYVLDTEDVFYRIK-R 393
            GI L RNKR +AC DE S  S+ +E LQI NGLECKI+ NS KVSYVLDTED  +R + R
Sbjct: 1422 GIFLKRNKRGYACSDEFS--SEVMEGLQIINGLECKIASNSSKVSYVLDTEDFLFRTRSR 1479

Query: 392  RRTNHLSRSNRDQANPSNASSARAERFNRL 303
            R+  HL  S  +Q  PSN  S+R  RF +L
Sbjct: 1480 RKALHLKSSCYEQRKPSNIRSSRVARFRKL 1509


>gb|ACJ86302.1| unknown [Medicago truncatula]
          Length = 128

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 51/90 (56%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
 Frame = -3

Query: 569 GIALTRNKRKFACEDEISVTSQALEELQIFNGLECKISCNSYKVSYVLDTEDVFYRIK-R 393
           GI L RNKR +AC DE S  S+ +E LQI NGLECKI+ NS KVSYVLDTED  +R + R
Sbjct: 37  GIFLKRNKRGYACSDEFS--SEVMEGLQIINGLECKIASNSSKVSYVLDTEDFLFRTRSR 94

Query: 392 RRTNHLSRSNRDQANPSNASSARAERFNRL 303
           R+  HL  S  +Q  PSN  S+R  RF +L
Sbjct: 95  RKALHLKSSCYEQRKPSNIRSSRVARFRKL 124


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