BLASTX nr result

ID: Cnidium21_contig00015556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015556
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_177907.1| translation initiation factor eIF-5 [Arabidopsi...    58   7e-07
ref|XP_003518639.1| PREDICTED: eukaryotic translation initiation...    58   9e-07
ref|XP_002513843.1| eukaryotic translation initiation factor, pu...    58   9e-07
ref|XP_003536828.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...    57   2e-06
ref|XP_002887702.1| hypothetical protein ARALYDRAFT_476949 [Arab...    56   3e-06

>ref|NP_177907.1| translation initiation factor eIF-5 [Arabidopsis thaliana]
           gi|28380089|sp|Q9S825.1|IF5Z_ARATH RecName:
           Full=Probable eukaryotic translation initiation factor
           5-2; Short=eIF-5 2 gi|6573756|gb|AAF17676.1|AC009243_3
           F28K19.5 [Arabidopsis thaliana]
           gi|12323296|gb|AAG51628.1|AC012193_10 putative
           eukaryotic translation initiation factor 5; 76444-77757
           [Arabidopsis thaliana] gi|17065236|gb|AAL32772.1|
           putative eukaryotic translation initiation factor 5
           [Arabidopsis thaliana] gi|17473619|gb|AAL38273.1|
           putative eukaryotic translation initiation factor 5
           [Arabidopsis thaliana] gi|21387159|gb|AAM47983.1|
           putative eukaryotic translation initiation factor 5
           [Arabidopsis thaliana] gi|25084097|gb|AAN72174.1|
           putative eukaryotic translation initiation factor 5
           [Arabidopsis thaliana] gi|332197912|gb|AEE36033.1|
           translation initiation factor eIF-5 [Arabidopsis
           thaliana]
          Length = 437

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -2

Query: 414 EKGLNGNDKNSLIWKIVKPFVEWLQSAESETEDE 313
           EKGL G DK+S +WK VKPFVEWLQSAESE+E+E
Sbjct: 403 EKGLTGADKSSPVWKNVKPFVEWLQSAESESEEE 436


>ref|XP_003518639.1| PREDICTED: eukaryotic translation initiation factor 5-like [Glycine
           max]
          Length = 441

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = -2

Query: 414 EKGLNGNDKNSLIWKIVKPFVEWLQSAESETEDE 313
           +KGL GN+KNS IWK  +PF++WLQSAESETE+E
Sbjct: 408 QKGLKGNNKNSKIWKNAQPFIDWLQSAESETEEE 441


>ref|XP_002513843.1| eukaryotic translation initiation factor, putative [Ricinus
           communis] gi|223546929|gb|EEF48426.1| eukaryotic
           translation initiation factor, putative [Ricinus
           communis]
          Length = 447

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/34 (67%), Positives = 32/34 (94%)
 Frame = -2

Query: 414 EKGLNGNDKNSLIWKIVKPFVEWLQSAESETEDE 313
           +KGL+G++KNS +WK VKPFVEWL++AESE+E+E
Sbjct: 414 QKGLSGSNKNSAVWKYVKPFVEWLENAESESEEE 447


>ref|XP_003536828.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
           factor 5-like [Glycine max]
          Length = 126

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = -2

Query: 414 EKGLNGNDKNSLIWKIVKPFVEWLQSAESETEDE 313
           +KGL G +KNS IWK V+PF++WLQSAESETE+E
Sbjct: 93  QKGLKGENKNSKIWKNVQPFIDWLQSAESETEEE 126


>ref|XP_002887702.1| hypothetical protein ARALYDRAFT_476949 [Arabidopsis lyrata subsp.
           lyrata] gi|297333543|gb|EFH63961.1| hypothetical protein
           ARALYDRAFT_476949 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = -2

Query: 414 EKGLNGNDKNSLIWKIVKPFVEWLQSAESETEDE 313
           EKG  G DK+S +WK VKPFVEWLQSAESE+E+E
Sbjct: 406 EKGFTGVDKSSPVWKNVKPFVEWLQSAESESEEE 439


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