BLASTX nr result

ID: Cnidium21_contig00015548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015548
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137193.1| PREDICTED: 50S ribosomal protein L23-like [C...   232   6e-59
gb|ABB17000.1| ribosomal protein L23 family protein [Solanum tub...   231   1e-58
ref|XP_002270942.2| PREDICTED: uncharacterized protein LOC100245...   229   5e-58
emb|CAN63891.1| hypothetical protein VITISV_012657 [Vitis vinifera]   229   5e-58
ref|XP_003552058.1| PREDICTED: uncharacterized protein LOC100800...   214   2e-53

>ref|XP_004137193.1| PREDICTED: 50S ribosomal protein L23-like [Cucumis sativus]
           gi|449483270|ref|XP_004156540.1| PREDICTED: 50S
           ribosomal protein L23-like isoform 1 [Cucumis sativus]
           gi|449483272|ref|XP_004156541.1| PREDICTED: 50S
           ribosomal protein L23-like isoform 2 [Cucumis sativus]
          Length = 174

 Score =  232 bits (592), Expect = 6e-59
 Identities = 118/132 (89%), Positives = 127/132 (96%)
 Frame = -1

Query: 718 MGSRLGRRVVNFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVEKVQ 539
           MGSRLGRRVV+FANLPIKLLMPTSF+NITEIALKTIPSASKIEIKRVLESLYGFEV+KVQ
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVQ 60

Query: 538 TLNMDGKKKKRGGILIAKPDYKKAYVTLRNPLSISPDLFPIRLIEEDKKNLNKQSKSSFV 359
           TLNM+GKKKKRGGILIAKPDYKKAYVTLRNPLSISPD++PIR+IEEDK+N+NKQSKSS V
Sbjct: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISPDMYPIRIIEEDKRNMNKQSKSSIV 120

Query: 358 EGDEAKKKSHWL 323
           E  EAKK  HWL
Sbjct: 121 EEGEAKK--HWL 130


>gb|ABB17000.1| ribosomal protein L23 family protein [Solanum tuberosum]
          Length = 188

 Score =  231 bits (590), Expect = 1e-58
 Identities = 127/186 (68%), Positives = 140/186 (75%), Gaps = 4/186 (2%)
 Frame = -1

Query: 718 MGSRLGRRVVNFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVEKVQ 539
           MGSRLGRRVVNFANLPIKLLMP+SFSNITEI+LKTIPSASKIEIKRVLESLYGFEVEKVQ
Sbjct: 1   MGSRLGRRVVNFANLPIKLLMPSSFSNITEISLKTIPSASKIEIKRVLESLYGFEVEKVQ 60

Query: 538 TLNMDGKKKKRGGILIAKPDYKKAYVTLRNPLSISPDLFPIRLIEEDKKNLNKQSKSSFV 359
           TLNMDGKKKKRGG+LIAKPDYKKAYVTLRNPLSISPDLFPI +I+E+KKN++K+SKSS V
Sbjct: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDLFPIGVIQEEKKNMSKKSKSSIV 120

Query: 358 EGDEAKKKSHWL----EGNGKPEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVKFP 191
           E DE  KK HWL    +G  + E+                                 KFP
Sbjct: 121 EDDE-PKKMHWLDEKKDGRNRSEM-RFGRGRDHRSGQRSDVGRDRGGEHRDVGAAAAKFP 178

Query: 190 WSSMKS 173
           WSSM+S
Sbjct: 179 WSSMRS 184


>ref|XP_002270942.2| PREDICTED: uncharacterized protein LOC100245960 [Vitis vinifera]
           gi|296084744|emb|CBI25888.3| unnamed protein product
           [Vitis vinifera]
          Length = 170

 Score =  229 bits (584), Expect = 5e-58
 Identities = 124/187 (66%), Positives = 139/187 (74%), Gaps = 4/187 (2%)
 Frame = -1

Query: 718 MGSRLGRRVVNFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVEKVQ 539
           MGSRLGRRV+NF NLPIKLLMP+SF+NI EIALKT+PSASKIEIKRVLESLYGFEVEKV+
Sbjct: 1   MGSRLGRRVINFTNLPIKLLMPSSFTNIKEIALKTVPSASKIEIKRVLESLYGFEVEKVR 60

Query: 538 TLNMDGKKKKRGGILIAKPDYKKAYVTLRNPLSISPDLFPIRLIEEDKKNLNKQSKSSFV 359
           TLNM+GKKKKRGG+LIAKPDYKKAY+TL+NPLSISPDL+PIRLIEE+KKN NKQSKSS V
Sbjct: 61  TLNMEGKKKKRGGLLIAKPDYKKAYITLKNPLSISPDLYPIRLIEEEKKNTNKQSKSSIV 120

Query: 358 EGDEAKKKSHWLEGNG----KPEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVKFP 191
           E  EA  KSHWL+G      +PE S                                KFP
Sbjct: 121 EEGEA--KSHWLDGKDGDRFRPEKS----------------SAERGRGGRGGAAAAAKFP 162

Query: 190 WSSMKSS 170
           WS M++S
Sbjct: 163 WSGMRAS 169


>emb|CAN63891.1| hypothetical protein VITISV_012657 [Vitis vinifera]
          Length = 480

 Score =  229 bits (584), Expect = 5e-58
 Identities = 124/187 (66%), Positives = 139/187 (74%), Gaps = 4/187 (2%)
 Frame = -1

Query: 718 MGSRLGRRVVNFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVEKVQ 539
           MGSRLGRRV+NF NLPIKLLMP+SF+NI EIALKT+PSASKIEIKRVLESLYGFEVEKV+
Sbjct: 310 MGSRLGRRVINFTNLPIKLLMPSSFTNIKEIALKTVPSASKIEIKRVLESLYGFEVEKVR 369

Query: 538 TLNMDGKKKKRGGILIAKPDYKKAYVTLRNPLSISPDLFPIRLIEEDKKNLNKQSKSSFV 359
           TLNM+GKKKKRGG+LIAKPDYKKAY+TL+NPLSISPDL+PIRLIEE+KKN NKQSKSS V
Sbjct: 370 TLNMEGKKKKRGGLLIAKPDYKKAYITLKNPLSISPDLYPIRLIEEEKKNTNKQSKSSIV 429

Query: 358 EGDEAKKKSHWLEGNG----KPEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVKFP 191
           E  EA  KSHWL+G      +PE S                                KFP
Sbjct: 430 EEGEA--KSHWLDGKDGDRFRPEKS---------------SAERGRGGRGGAAAAAAKFP 472

Query: 190 WSSMKSS 170
           WS M++S
Sbjct: 473 WSGMRAS 479


>ref|XP_003552058.1| PREDICTED: uncharacterized protein LOC100800404 [Glycine max]
          Length = 176

 Score =  214 bits (544), Expect = 2e-53
 Identities = 114/186 (61%), Positives = 135/186 (72%), Gaps = 2/186 (1%)
 Frame = -1

Query: 718 MGSRLGRRVVNFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVEKVQ 539
           MGSRLGRRVV FANLPIKLLMP SF+NI EIALKTIPSA+KIEIKRVL+SLYGF+V+KV+
Sbjct: 1   MGSRLGRRVVQFANLPIKLLMPNSFTNIHEIALKTIPSATKIEIKRVLQSLYGFDVDKVR 60

Query: 538 TLNMDGKKKKRGGILIAKPDYKKAYVTLRNPLSISPDLFPIRLIEEDKKNLNKQSKSSFV 359
           TLNM+GKKKKRGG+LIAKPDYKKAYVTL+ PLSISPDL+PIR+I+EDKK +NKQ+KSS V
Sbjct: 61  TLNMEGKKKKRGGLLIAKPDYKKAYVTLKTPLSISPDLYPIRIIDEDKKRINKQAKSSLV 120

Query: 358 EGDEAKKKS--HWLEGNGKPEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVKFPWS 185
           +  EA  ++  HWL    + +                                  KFPWS
Sbjct: 121 QDHEAHTEAHHHWLHDRKEAQ--------------PPFRPQKHGRLGRPEGASNAKFPWS 166

Query: 184 SMKSSS 167
           SM+S+S
Sbjct: 167 SMRSAS 172


Top