BLASTX nr result

ID: Cnidium21_contig00015492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015492
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272295.1| PREDICTED: 50S ribosomal protein L21, chloro...   146   7e-33
ref|XP_002526817.1| 50S ribosomal protein L21, putative [Ricinus...   142   1e-31
ref|XP_002891198.1| 50S ribosomal protein L21, chloroplast [Arab...   139   9e-31
ref|NP_174808.1| 50S ribosomal protein L21 [Arabidopsis thaliana...   139   1e-30
ref|XP_002325555.1| predicted protein [Populus trichocarpa] gi|2...   134   4e-29

>ref|XP_002272295.1| PREDICTED: 50S ribosomal protein L21, chloroplastic [Vitis
           vinifera] gi|297745266|emb|CBI40346.3| unnamed protein
           product [Vitis vinifera]
          Length = 209

 Score =  146 bits (368), Expect = 7e-33
 Identities = 76/117 (64%), Positives = 86/117 (73%)
 Frame = -2

Query: 528 KKEDIFAVVMIGGRQYIVFPGRFLYTQRLKGANVNDKVILNKVLLVGTKTSTYLGMXXXX 349
           K+E+IFAVVMIG RQYIVFPGR++YTQRLKGA+VNDK+ILN+VLLVGTKTSTY+G     
Sbjct: 91  KREEIFAVVMIGSRQYIVFPGRYIYTQRLKGADVNDKIILNRVLLVGTKTSTYIGKPVVP 150

Query: 348 XXXXXXXVEEQGLNDXXXXXXXXXXXXXXXXIGHRQPNTRIRIMGITGYEDSPALTL 178
                  VEEQGLN                 IGHRQPNTRIRI GITGY+DSPA+TL
Sbjct: 151 NAAVHAVVEEQGLNPKVMVFKYKKKKNYRRNIGHRQPNTRIRITGITGYQDSPAVTL 207


>ref|XP_002526817.1| 50S ribosomal protein L21, putative [Ricinus communis]
           gi|223533821|gb|EEF35552.1| 50S ribosomal protein L21,
           putative [Ricinus communis]
          Length = 214

 Score =  142 bits (357), Expect = 1e-31
 Identities = 74/117 (63%), Positives = 83/117 (70%)
 Frame = -2

Query: 528 KKEDIFAVVMIGGRQYIVFPGRFLYTQRLKGANVNDKVILNKVLLVGTKTSTYLGMXXXX 349
           K+E+IFAVVM+GGRQYIV PGRF+Y QRLKGANVNDKV LNKVLLVGT+T+TY+G     
Sbjct: 96  KREEIFAVVMVGGRQYIVIPGRFIYVQRLKGANVNDKVALNKVLLVGTRTTTYIGKPVVT 155

Query: 348 XXXXXXXVEEQGLNDXXXXXXXXXXXXXXXXIGHRQPNTRIRIMGITGYEDSPALTL 178
                  VEEQGLN                 IGHRQPNTRIRI GITGY+D PA+TL
Sbjct: 156 NAVVHAVVEEQGLNPKVVVFKYKKKKNYRRNIGHRQPNTRIRITGITGYQDYPAVTL 212


>ref|XP_002891198.1| 50S ribosomal protein L21, chloroplast [Arabidopsis lyrata subsp.
           lyrata] gi|297337040|gb|EFH67457.1| 50S ribosomal
           protein L21, chloroplast [Arabidopsis lyrata subsp.
           lyrata]
          Length = 215

 Score =  139 bits (350), Expect = 9e-31
 Identities = 72/115 (62%), Positives = 82/115 (71%)
 Frame = -2

Query: 531 AKKEDIFAVVMIGGRQYIVFPGRFLYTQRLKGANVNDKVILNKVLLVGTKTSTYLGMXXX 352
           AK+E+IFAVVM+GGRQYIVFPGR+LYTQRLK ANV+D+++LNKVLLVGTKT TY+G    
Sbjct: 95  AKREEIFAVVMVGGRQYIVFPGRYLYTQRLKDANVDDQIVLNKVLLVGTKTHTYIGKPVV 154

Query: 351 XXXXXXXXVEEQGLNDXXXXXXXXXXXXXXXXIGHRQPNTRIRIMGITGYEDSPA 187
                   VE QGLND                IGHRQPNTRIRI GITGYE+ PA
Sbjct: 155 TNATVHAVVENQGLNDKVVVFKYKPKKKYRRNIGHRQPNTRIRITGITGYEEYPA 209


>ref|NP_174808.1| 50S ribosomal protein L21 [Arabidopsis thaliana]
           gi|1710424|sp|P51412.1|RK21_ARATH RecName: Full=50S
           ribosomal protein L21, chloroplastic; AltName:
           Full=CL21; Flags: Precursor
           gi|8778379|gb|AAF79387.1|AC007887_46 F15O4.7
           [Arabidopsis thaliana]
           gi|16226899|gb|AAL16293.1|AF428363_1 At1g35680/F15O4_7
           [Arabidopsis thaliana] gi|1149573|emb|CAA89887.1|
           chloroplast ribosomal large subunit protein L21
           [Arabidopsis thaliana] gi|14456036|emb|CAB59360.2|
           chloroplast ribosomal protein L21 [Arabidopsis thaliana]
           gi|16648685|gb|AAL25535.1| At1g35680/F15O4_7
           [Arabidopsis thaliana] gi|21436001|gb|AAM51578.1|
           At1g35680/F15O4_7 [Arabidopsis thaliana]
           gi|332193702|gb|AEE31823.1| 50S ribosomal protein L21
           [Arabidopsis thaliana]
          Length = 220

 Score =  139 bits (349), Expect = 1e-30
 Identities = 71/115 (61%), Positives = 82/115 (71%)
 Frame = -2

Query: 531 AKKEDIFAVVMIGGRQYIVFPGRFLYTQRLKGANVNDKVILNKVLLVGTKTSTYLGMXXX 352
           AK+E+IFAV+M+GGRQYIVFPGR+LYTQRLK ANV+D+++LNKVLLVGTKT TY+G    
Sbjct: 95  AKREEIFAVIMVGGRQYIVFPGRYLYTQRLKDANVDDQIVLNKVLLVGTKTHTYIGKPVV 154

Query: 351 XXXXXXXXVEEQGLNDXXXXXXXXXXXXXXXXIGHRQPNTRIRIMGITGYEDSPA 187
                   VE QGLND                IGHRQPNTRIRI GITGYE+ PA
Sbjct: 155 TNATVHAVVESQGLNDKVVVFKYKPKKKYRRNIGHRQPNTRIRITGITGYEEYPA 209


>ref|XP_002325555.1| predicted protein [Populus trichocarpa] gi|222862430|gb|EEE99936.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  134 bits (336), Expect = 4e-29
 Identities = 70/117 (59%), Positives = 80/117 (68%)
 Frame = -2

Query: 528 KKEDIFAVVMIGGRQYIVFPGRFLYTQRLKGANVNDKVILNKVLLVGTKTSTYLGMXXXX 349
           K+E+IFAVVM+G RQYIV PGR+LY QRLKGANVNDK++LNKVLLVGT+TS Y+G     
Sbjct: 88  KREEIFAVVMVGSRQYIVIPGRWLYVQRLKGANVNDKIVLNKVLLVGTRTSAYIGKPVVT 147

Query: 348 XXXXXXXVEEQGLNDXXXXXXXXXXXXXXXXIGHRQPNTRIRIMGITGYEDSPALTL 178
                  VEEQGL+                 IGHRQPNTRIRI GITGY+D P  TL
Sbjct: 148 NASVHAVVEEQGLDAKKIVFKYKRKKNYRRNIGHRQPNTRIRITGITGYQDFPVSTL 204


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