BLASTX nr result

ID: Cnidium21_contig00015480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015480
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266998.1| PREDICTED: RNA polymerase II transcriptional...   117   3e-24
emb|CAN65190.1| hypothetical protein VITISV_032101 [Vitis vinifera]   117   3e-24
emb|CBI34506.3| unnamed protein product [Vitis vinifera]              115   9e-24
ref|NP_192830.1| RNA polymerase II transcriptional coactivator K...   112   9e-23
ref|NP_001238275.1| uncharacterized protein LOC100305633 [Glycin...   111   2e-22

>ref|XP_002266998.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
           [Vitis vinifera]
          Length = 187

 Score =  117 bits (293), Expect = 3e-24
 Identities = 63/142 (44%), Positives = 91/142 (64%), Gaps = 9/142 (6%)
 Frame = -3

Query: 802 PNYKKFVRQVVNSYII-------EHHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGE 644
           P+YK+FVRQVV +++        E                                +RG+
Sbjct: 45  PDYKRFVRQVVETFLQSTEEPGREPEPEPEPDRKKANTEAAEREPTEEEEEEEVEEDRGK 104

Query: 643 SA--KEYDDNGDIIICRLSGKRRVSWGEFKGRDFLSIREYFERDGKELPTAKGIALSAEQ 470
           S+  KEYDD+GD+IICRLS +RRV+  +F+G+  +SIRE++ +DGKELP++KGI+L+AEQ
Sbjct: 105 SSGVKEYDDDGDLIICRLSDRRRVTIQDFRGKTLVSIREFYRKDGKELPSSKGISLTAEQ 164

Query: 469 WASLKENVPAIEEAIQKISSKL 404
           W++ K+NVPAIEEAIQK+ S+L
Sbjct: 165 WSAFKKNVPAIEEAIQKMESRL 186


>emb|CAN65190.1| hypothetical protein VITISV_032101 [Vitis vinifera]
          Length = 320

 Score =  117 bits (293), Expect = 3e-24
 Identities = 63/142 (44%), Positives = 91/142 (64%), Gaps = 9/142 (6%)
 Frame = -3

Query: 802 PNYKKFVRQVVNSYII-------EHHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGE 644
           P+YK+FVRQVV +++        E                                +RG+
Sbjct: 123 PDYKRFVRQVVETFLQSTEEPGREPEPEPEPDRKKANTEAAEREPTEEEEEEEVEEDRGK 182

Query: 643 SA--KEYDDNGDIIICRLSGKRRVSWGEFKGRDFLSIREYFERDGKELPTAKGIALSAEQ 470
           S+  KEYDD+GD+IICRLS +RRV+  +F+G+  +SIRE++ +DGKELP++KGI+L+AEQ
Sbjct: 183 SSGVKEYDDDGDLIICRLSDRRRVTIQDFRGKTLVSIREFYRKDGKELPSSKGISLTAEQ 242

Query: 469 WASLKENVPAIEEAIQKISSKL 404
           W++ K+NVPAIEEAIQK+ S+L
Sbjct: 243 WSAFKKNVPAIEEAIQKMESRL 264


>emb|CBI34506.3| unnamed protein product [Vitis vinifera]
          Length = 142

 Score =  115 bits (289), Expect = 9e-24
 Identities = 59/133 (44%), Positives = 84/133 (63%)
 Frame = -3

Query: 802 PNYKKFVRQVVNSYIIEHHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGESAKEYDD 623
           P+YK+FVRQVV +++                                        KEYDD
Sbjct: 45  PDYKRFVRQVVETFL------------------------------------HSGVKEYDD 68

Query: 622 NGDIIICRLSGKRRVSWGEFKGRDFLSIREYFERDGKELPTAKGIALSAEQWASLKENVP 443
           +GD+IICRLS +RRV+  +F+G+  +SIRE++ +DGKELP++KGI+L+AEQW++ K+NVP
Sbjct: 69  DGDLIICRLSDRRRVTIQDFRGKTLVSIREFYRKDGKELPSSKGISLTAEQWSAFKKNVP 128

Query: 442 AIEEAIQKISSKL 404
           AIEEAIQK+ S+L
Sbjct: 129 AIEEAIQKMESRL 141


>ref|NP_192830.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis
           thaliana] gi|145333013|ref|NP_001078372.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana]
           gi|37079408|sp|O65155.1|KELP_ARATH RecName: Full=RNA
           polymerase II transcriptional coactivator KELP
           gi|2997686|gb|AAC08575.1| putative transcriptional
           co-activator [Arabidopsis thaliana]
           gi|3513735|gb|AAC33951.1| contains similarity to RNA
           polymerase II transcription cofactor p15 [Arabidopsis
           thaliana] gi|4539366|emb|CAB40060.1| putative protein
           [Arabidopsis thaliana] gi|7267790|emb|CAB81193.1|
           putative protein [Arabidopsis thaliana]
           gi|21554027|gb|AAM63108.1| putative transcriptional
           coactivator [Arabidopsis thaliana]
           gi|29028806|gb|AAO64782.1| At4g10920 [Arabidopsis
           thaliana] gi|110736559|dbj|BAF00245.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|110738319|dbj|BAF01087.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657543|gb|AEE82943.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana] gi|332657544|gb|AEE82944.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana]
          Length = 165

 Score =  112 bits (280), Expect = 9e-23
 Identities = 49/82 (59%), Positives = 71/82 (86%)
 Frame = -3

Query: 649 GESAKEYDDNGDIIICRLSGKRRVSWGEFKGRDFLSIREYFERDGKELPTAKGIALSAEQ 470
           G+  KE+DD+GD+IICRLS KRRV+  EFKG+  +SIREY+++DGKELPT+KGI+L+ EQ
Sbjct: 84  GKGNKEFDDDGDLIICRLSDKRRVTIQEFKGKSLVSIREYYKKDGKELPTSKGISLTDEQ 143

Query: 469 WASLKENVPAIEEAIQKISSKL 404
           W++ K+N+PAIE A++K+ S++
Sbjct: 144 WSTFKKNMPAIENAVKKMESRV 165


>ref|NP_001238275.1| uncharacterized protein LOC100305633 [Glycine max]
           gi|255626145|gb|ACU13417.1| unknown [Glycine max]
          Length = 166

 Score =  111 bits (277), Expect = 2e-22
 Identities = 57/131 (43%), Positives = 80/131 (61%)
 Frame = -3

Query: 802 PNYKKFVRQVVNSYIIEHHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGESAKEYDD 623
           P++K FV+QVV +++ E                                      KEYDD
Sbjct: 46  PHFKAFVKQVVKAFLQEEEQRQQQQQQDEDDDDEEEEQGGV-----------SKGKEYDD 94

Query: 622 NGDIIICRLSGKRRVSWGEFKGRDFLSIREYFERDGKELPTAKGIALSAEQWASLKENVP 443
            GD+IICRLS KRRV   +F+G+  +SIREY+++DGKELPT+KGI+L+ EQW++ K+NVP
Sbjct: 95  EGDLIICRLSDKRRVPIQDFRGKTLVSIREYYKKDGKELPTSKGISLTEEQWSTFKKNVP 154

Query: 442 AIEEAIQKISS 410
           AIE+AI+K+ S
Sbjct: 155 AIEKAIKKMES 165


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