BLASTX nr result

ID: Cnidium21_contig00015468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015468
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACX47456.1| LIM1 [Hevea brasiliensis]                              100   1e-19
ref|XP_002530411.1| Pollen-specific protein SF3, putative [Ricin...   100   1e-19
gb|ABK58469.1| LIM domain protein WLIM2a [Populus tremula x Popu...   100   2e-19
ref|XP_002315180.1| predicted protein [Populus trichocarpa] gi|1...    99   4e-19
ref|XP_002312139.1| predicted protein [Populus trichocarpa] gi|1...    99   5e-19

>gb|ACX47456.1| LIM1 [Hevea brasiliensis]
          Length = 189

 Score =  100 bits (249), Expect = 1e-19
 Identities = 43/51 (84%), Positives = 48/51 (94%)
 Frame = -1

Query: 155 MAFSGTQQKCKACSKTVYPMELVSADGIDFHKSCFKCTHCKGTLKLSNYSS 3
           M+F+GTQQKCKAC KTVYPMEL+SADG+ +HKSCFKC HCKGTLKLSNYSS
Sbjct: 1   MSFTGTQQKCKACEKTVYPMELLSADGVPYHKSCFKCFHCKGTLKLSNYSS 51



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/58 (50%), Positives = 38/58 (65%)
 Frame = -1

Query: 176 RSK*GATMAFSGTQQKCKACSKTVYPMELVSADGIDFHKSCFKCTHCKGTLKLSNYSS 3
           RS   A   FSGTQ+KC  C KT YP+E V+ +   +HKSCFKC+H   +L  SNY++
Sbjct: 92  RSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSLSPSNYAA 149


>ref|XP_002530411.1| Pollen-specific protein SF3, putative [Ricinus communis]
           gi|223530060|gb|EEF31981.1| Pollen-specific protein SF3,
           putative [Ricinus communis]
          Length = 189

 Score =  100 bits (249), Expect = 1e-19
 Identities = 43/51 (84%), Positives = 48/51 (94%)
 Frame = -1

Query: 155 MAFSGTQQKCKACSKTVYPMELVSADGIDFHKSCFKCTHCKGTLKLSNYSS 3
           M+F+GTQQKCKAC KTVYPMEL+SADG+ +HKSCFKC HCKGTLKLSNYSS
Sbjct: 1   MSFTGTQQKCKACEKTVYPMELLSADGVPYHKSCFKCFHCKGTLKLSNYSS 51



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = -1

Query: 176 RSK*GATMAFSGTQQKCKACSKTVYPMELVSADGIDFHKSCFKCTHCKGTLKLSNYSS 3
           RS   A   FSGTQ+KC  C KT YP+E V+ +   +HKSCFKC+H   ++  SNY++
Sbjct: 92  RSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSISPSNYAA 149


>gb|ABK58469.1| LIM domain protein WLIM2a [Populus tremula x Populus alba]
          Length = 189

 Score =  100 bits (248), Expect = 2e-19
 Identities = 43/51 (84%), Positives = 48/51 (94%)
 Frame = -1

Query: 155 MAFSGTQQKCKACSKTVYPMELVSADGIDFHKSCFKCTHCKGTLKLSNYSS 3
           M+F+GTQQKCKAC KTVYPMEL+SADG+ +HKSCFKC HCKGTLKLSNYSS
Sbjct: 1   MSFTGTQQKCKACEKTVYPMELLSADGVAYHKSCFKCFHCKGTLKLSNYSS 51



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/58 (46%), Positives = 37/58 (63%)
 Frame = -1

Query: 176 RSK*GATMAFSGTQQKCKACSKTVYPMELVSADGIDFHKSCFKCTHCKGTLKLSNYSS 3
           RS   A   FSGTQ+KC  C KT YP+E V+ +   +HKSCFKC+H    +  S+Y++
Sbjct: 92  RSPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCAITPSSYAA 149


>ref|XP_002315180.1| predicted protein [Populus trichocarpa] gi|118488763|gb|ABK96192.1|
           unknown [Populus trichocarpa]
           gi|222864220|gb|EEF01351.1| predicted protein [Populus
           trichocarpa]
          Length = 189

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 42/51 (82%), Positives = 48/51 (94%)
 Frame = -1

Query: 155 MAFSGTQQKCKACSKTVYPMELVSADGIDFHKSCFKCTHCKGTLKLSNYSS 3
           M+F+GTQQKCKAC KTVYPMEL+SADG+ +HK+CFKC HCKGTLKLSNYSS
Sbjct: 1   MSFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTLKLSNYSS 51



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = -1

Query: 176 RSK*GATMAFSGTQQKCKACSKTVYPMELVSADGIDFHKSCFKCTHCKGTLKLSNYSS 3
           RS   A   FSGTQ+KC  C KT YP+E V+ +   +HKSCFKC+H    +  SNY++
Sbjct: 92  RSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCAITPSNYAA 149


>ref|XP_002312139.1| predicted protein [Populus trichocarpa] gi|118485190|gb|ABK94456.1|
           unknown [Populus trichocarpa]
           gi|222851959|gb|EEE89506.1| predicted protein [Populus
           trichocarpa]
          Length = 189

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 42/51 (82%), Positives = 47/51 (92%)
 Frame = -1

Query: 155 MAFSGTQQKCKACSKTVYPMELVSADGIDFHKSCFKCTHCKGTLKLSNYSS 3
           M+F+GTQQKCKAC KTVYPMEL+S DG+ +HKSCFKC HCKGTLKLSNYSS
Sbjct: 1   MSFTGTQQKCKACEKTVYPMELLSTDGVAYHKSCFKCFHCKGTLKLSNYSS 51



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = -1

Query: 176 RSK*GATMAFSGTQQKCKACSKTVYPMELVSADGIDFHKSCFKCTHCKGTLKLSNYSS 3
           RS   A   FSGTQ+KC  C KT YP+E V+ +   +HKSCFKC+H    +  SNY++
Sbjct: 92  RSPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCAITPSNYAA 149


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