BLASTX nr result

ID: Cnidium21_contig00015466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015466
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307626.1| predicted protein [Populus trichocarpa] gi|2...   139   6e-31
ref|XP_002300803.1| predicted protein [Populus trichocarpa] gi|2...   136   4e-30
ref|XP_002520982.1| F-box/leucine rich repeat protein, putative ...   134   1e-29
ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Viti...   132   7e-29
ref|XP_004172007.1| PREDICTED: F-box/LRR-repeat protein 17-like ...   129   4e-28

>ref|XP_002307626.1| predicted protein [Populus trichocarpa] gi|222857075|gb|EEE94622.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score =  139 bits (350), Expect = 6e-31
 Identities = 69/97 (71%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
 Frame = -1

Query: 611 TQGGIQFATNQLPLLELMDFGMTICD-LYEDPAFEEDTSSKLQNPSNNKLHLMYQKLIIK 435
           T  GIQFAT QLPLLELMD GMTICD   ++P  +E    +LQ    NKLHL+YQKLIIK
Sbjct: 408 TSSGIQFATAQLPLLELMDCGMTICDPSSQNPTCDESGDFELQMTFKNKLHLIYQKLIIK 467

Query: 434 HGRLKRLSLWGCSGLDALFINCLELNDLNLNSCKNLY 324
           H RLK+LSLWGCSGLDAL++NC ELNDLNLNSCKNL+
Sbjct: 468 HSRLKKLSLWGCSGLDALYLNCPELNDLNLNSCKNLH 504


>ref|XP_002300803.1| predicted protein [Populus trichocarpa] gi|222842529|gb|EEE80076.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score =  136 bits (343), Expect = 4e-30
 Identities = 68/97 (70%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
 Frame = -1

Query: 611 TQGGIQFATNQLPLLELMDFGMTICDLYED-PAFEEDTSSKLQNPSNNKLHLMYQKLIIK 435
           T  GIQFAT QLPLLELMD GMTICDL    P  +E    +LQ    NKLHL+YQK+IIK
Sbjct: 408 TSSGIQFATAQLPLLELMDCGMTICDLSSQYPTSDESGDFELQTTFKNKLHLIYQKVIIK 467

Query: 434 HGRLKRLSLWGCSGLDALFINCLELNDLNLNSCKNLY 324
           H RLK+LSLWGCSGLDAL++NC EL DLNLNSCKNL+
Sbjct: 468 HSRLKKLSLWGCSGLDALYLNCPELIDLNLNSCKNLH 504


>ref|XP_002520982.1| F-box/leucine rich repeat protein, putative [Ricinus communis]
           gi|223539819|gb|EEF41399.1| F-box/leucine rich repeat
           protein, putative [Ricinus communis]
          Length = 586

 Score =  134 bits (338), Expect = 1e-29
 Identities = 67/96 (69%), Positives = 76/96 (79%)
 Frame = -1

Query: 611 TQGGIQFATNQLPLLELMDFGMTICDLYEDPAFEEDTSSKLQNPSNNKLHLMYQKLIIKH 432
           T  GIQFAT QLPLLELMD GMTICD    P+ +     +L+    +KLHL+YQKLIIKH
Sbjct: 409 TSSGIQFATAQLPLLELMDCGMTICDP-SGPSSDGSEEDELRTSFKSKLHLIYQKLIIKH 467

Query: 431 GRLKRLSLWGCSGLDALFINCLELNDLNLNSCKNLY 324
           GRLK+LSLWGCSGLDAL +NC ELNDLNLNSCKNL+
Sbjct: 468 GRLKKLSLWGCSGLDALCLNCPELNDLNLNSCKNLH 503


>ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Vitis vinifera]
           gi|297735494|emb|CBI17934.3| unnamed protein product
           [Vitis vinifera]
          Length = 574

 Score =  132 bits (332), Expect = 7e-29
 Identities = 66/97 (68%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
 Frame = -1

Query: 611 TQGGIQFATNQLPLLELMDFGMTICDLY-EDPAFEEDTSSKLQNPSNNKLHLMYQKLIIK 435
           +  GIQFAT QLPLLELMD GMTI D   + P  EE+   + Q  SN+K+HL+YQKLIIK
Sbjct: 397 SSSGIQFATAQLPLLELMDCGMTISDPNSQGPPSEENIDCESQQVSNSKMHLIYQKLIIK 456

Query: 434 HGRLKRLSLWGCSGLDALFINCLELNDLNLNSCKNLY 324
           H RLK+LSLWGCSGLDAL++NC ELNDLNLNSC NL+
Sbjct: 457 HSRLKKLSLWGCSGLDALYLNCPELNDLNLNSCTNLH 493


>ref|XP_004172007.1| PREDICTED: F-box/LRR-repeat protein 17-like [Cucumis sativus]
          Length = 587

 Score =  129 bits (325), Expect = 4e-28
 Identities = 63/97 (64%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
 Frame = -1

Query: 611 TQGGIQFATNQLPLLELMDFGMTICDLYEDPAFEEDTSSKLQNPS-NNKLHLMYQKLIIK 435
           T  GIQFAT +LPLLELMD GMTICD     +  +    KL  P  N+K HL+YQKLIIK
Sbjct: 407 TSSGIQFATAELPLLELMDCGMTICDPNATDSTSDSGDQKLSKPPPNSKFHLIYQKLIIK 466

Query: 434 HGRLKRLSLWGCSGLDALFINCLELNDLNLNSCKNLY 324
           H  LK+LSLWGCSGLDAL++NC +L+DLNLNSCKNL+
Sbjct: 467 HNNLKKLSLWGCSGLDALYLNCPQLDDLNLNSCKNLH 503


Top