BLASTX nr result

ID: Cnidium21_contig00015368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015368
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|1...   176   4e-42
ref|XP_002522447.1| zinc finger protein, putative [Ricinus commu...   163   5e-38
ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   162   6e-38
ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|2...   161   2e-37
gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]      161   2e-37

>ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|118483434|gb|ABK93617.1|
           unknown [Populus trichocarpa]
           gi|222865173|gb|EEF02304.1| predicted protein [Populus
           trichocarpa]
          Length = 218

 Score =  176 bits (447), Expect = 4e-42
 Identities = 92/181 (50%), Positives = 126/181 (69%), Gaps = 10/181 (5%)
 Frame = +3

Query: 162 STDSQTNTDPDQDSSERSDPRDRVIIMNPSTRRVLMIEGSASGVNALVRDLMIPDGPPPA 341
           ST++    DPDQ++ + +DP +R+I++NP T+ +++IEG+AS + +L+RD+    G PPA
Sbjct: 36  STNTTEQRDPDQEAPQTTDPNERIILINPFTQGMVVIEGAAS-LESLLRDIGNKKGQPPA 94

Query: 342 SKASIEAMPSVEIKEDD---ECVICLDEF-VGGLAKEMPCKHKFHGGCVEKWLKINGSCP 509
           SKASIEAMP VEI ED+   EC ICL+E+ +GG+ KEMPCKH+FHGGCVEKWLKI+G+CP
Sbjct: 95  SKASIEAMPKVEIGEDNKDGECAICLEEWELGGVVKEMPCKHRFHGGCVEKWLKIHGNCP 154

Query: 510 VCRYKMPVDDDNDFNYKNLSAVEEGRR--RELW----FSVGTLIGDPNQMARNDSDGHDS 671
           VCRYKMPVD++     ++       RR  RE+W    F+     GD N+   NDS   D 
Sbjct: 155 VCRYKMPVDEEELGKKRDEGDGGRERRVEREIWVSFAFNGSRRNGDSNENPSNDSSTEDQ 214

Query: 672 E 674
           E
Sbjct: 215 E 215


>ref|XP_002522447.1| zinc finger protein, putative [Ricinus communis]
           gi|223538332|gb|EEF39939.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 233

 Score =  163 bits (412), Expect = 5e-38
 Identities = 84/187 (44%), Positives = 124/187 (66%), Gaps = 11/187 (5%)
 Frame = +3

Query: 162 STDSQTNTD-PDQDSSERSDPRDRVIIMNPSTRRVLMIEGSASGVNALVRDLMIPDGPPP 338
           ST + TNT+ PDQ++ E +   +R+I++NP T+ +++IEG+ S +++L+R+L   +G PP
Sbjct: 35  STTTNTNTENPDQENQETTSRHERIILINPFTQGMVVIEGTES-LDSLLRELAAKNGHPP 93

Query: 339 ASKASIEAMPSVEIKE----DDECVICLDEF---VGGLAKEMPCKHKFHGGCVEKWLKIN 497
           AS+ASIE++PSV+++E    D EC ICL+E+    G + KEMPCKH+FHG C+EKWL I+
Sbjct: 94  ASRASIESLPSVDVQEIGDRDSECAICLEEWEIGAGAVVKEMPCKHRFHGNCIEKWLGIH 153

Query: 498 GSCPVCRYKMPVDDDNDFNYKNLSAVEEG---RRRELWFSVGTLIGDPNQMARNDSDGHD 668
           GSCPVCRYKMPVDD+     ++     EG   RRRE+W S        N+   + +    
Sbjct: 154 GSCPVCRYKMPVDDEELSKKRDHEEEGEGGRERRREIWVSFSFNSSSSNRRNDDSNQTPS 213

Query: 669 SEMQGLD 689
           SE   +D
Sbjct: 214 SESNDVD 220


>ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 233

 Score =  162 bits (411), Expect = 6e-38
 Identities = 89/176 (50%), Positives = 123/176 (69%), Gaps = 9/176 (5%)
 Frame = +3

Query: 159 ESTDSQTNTDPDQDSSERSDPRDRVIIMNPSTRRVLMIEGSASGVNALVRDLMIPDGPPP 338
           ++T  Q + DPD ++++   PRDR+I++NP T+ +++IEG++S  ++L+R+L    G PP
Sbjct: 40  DTTTRQESDDPDDETTDTPTPRDRIILINPFTQGMIVIEGNSS-FDSLLRELASKGGQPP 98

Query: 339 ASKASIEAMPSVEIKEDD-ECVICLDEF-VGGLAKEMPCKHKFHGGCVEKWLKINGSCPV 512
           A+KASIEAMPSVE+  DD ECVICL+E+ VG +AKEMPCKHKFH  C+ KWL I+GSCPV
Sbjct: 99  ATKASIEAMPSVEVGGDDGECVICLEEWKVGCVAKEMPCKHKFHENCIVKWLGIHGSCPV 158

Query: 513 CRYKMPVDDDNDFNYKNLSAV--EEGR-----RRELWFSVGTLIGDPNQMARNDSD 659
           CR+KMPVD++ D   K   +V  EEGR      RE+W S        +   RNDS+
Sbjct: 159 CRHKMPVDEE-DLGKKREGSVGDEEGRGRRRVEREIWVS----FSFNSNSRRNDSN 209


>ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|222851125|gb|EEE88672.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  161 bits (407), Expect = 2e-37
 Identities = 89/179 (49%), Positives = 121/179 (67%), Gaps = 9/179 (5%)
 Frame = +3

Query: 162 STDSQTNTDPDQDSSERSDPRDRVIIMNPSTRRVLMIEGSASGVNALVRDLMIPDGPPPA 341
           ST+S    DPDQ+  + +DP +R+I++NP T+ +++IEG+AS + +L+RD+   +G PPA
Sbjct: 36  STNSTEERDPDQEP-QTTDPNERIILINPLTQGMVVIEGAAS-LESLLRDIGNKNGQPPA 93

Query: 342 SKASIEAMPSVEIKEDD---ECVICLDEFV-GGLAKEMPCKHKFHGGCVEKWLKINGSCP 509
           SKASIEAMPSVEI ED+   EC ICL+E+  G + KEMPCKH+FHG CVEKWLKI+G+CP
Sbjct: 94  SKASIEAMPSVEIGEDNKDGECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIHGNCP 153

Query: 510 VCRYKMPVDDDNDFNYKNLSAVEEGR-----RRELWFSVGTLIGDPNQMARNDSDGHDS 671
           VCRYKMPVD++     K     + GR      RE+W S     G+      N++   DS
Sbjct: 154 VCRYKMPVDEEE--LGKKRDGGDGGREWRRAEREIWVSF-AFNGNRRNRDSNENPSSDS 209


>gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 225

 Score =  161 bits (407), Expect = 2e-37
 Identities = 89/179 (49%), Positives = 121/179 (67%), Gaps = 9/179 (5%)
 Frame = +3

Query: 162 STDSQTNTDPDQDSSERSDPRDRVIIMNPSTRRVLMIEGSASGVNALVRDLMIPDGPPPA 341
           ST+S    DPDQ+  + +DP +R+I++NP T+ +++IEG+AS + +L+RD+   +G PPA
Sbjct: 36  STNSTEERDPDQEP-QTTDPNERIILINPLTQGMVVIEGAAS-LESLLRDMGNKNGQPPA 93

Query: 342 SKASIEAMPSVEIKEDD---ECVICLDEFV-GGLAKEMPCKHKFHGGCVEKWLKINGSCP 509
           SKASIEAMPSVEI ED+   EC ICL+E+  G + KEMPCKH+FHG CVEKWLKI+G+CP
Sbjct: 94  SKASIEAMPSVEIGEDNKDGECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIHGNCP 153

Query: 510 VCRYKMPVDDDNDFNYKNLSAVEEGR-----RRELWFSVGTLIGDPNQMARNDSDGHDS 671
           VCRYKMPVD++     K     + GR      RE+W S     G+      N++   DS
Sbjct: 154 VCRYKMPVDEEE--LGKKRDGGDGGREWRRAEREIWVSF-AFNGNRRNRDSNENPSSDS 209


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