BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015363
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302256.1| predicted protein [Populus trichocarpa] gi|1...   226   4e-57
ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloro...   220   2e-55
gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea bras...   220   3e-55
ref|XP_002306609.1| predicted protein [Populus trichocarpa] gi|2...   220   3e-55
gb|AEC10995.1| 30S ribosomal protein s13 [Camellia sinensis]          216   3e-54

>ref|XP_002302256.1| predicted protein [Populus trichocarpa] gi|118488232|gb|ABK95935.1|
           unknown [Populus trichocarpa]
           gi|222843982|gb|EEE81529.1| predicted protein [Populus
           trichocarpa]
          Length = 168

 Score =  226 bits (576), Expect = 4e-57
 Identities = 111/126 (88%), Positives = 116/126 (92%)
 Frame = +3

Query: 162 SLSFPISTTPKIGGLSIRCARVGGVEIPNAKRVQYSLQYIHGIGRTRALQILNDLKMENK 341
           S+S PIS  PK G LSIRCARVGGVEIPN+KRV+YSLQYIHGIGR+ A QIL+DL MENK
Sbjct: 28  SISLPISNPPKAGSLSIRCARVGGVEIPNSKRVEYSLQYIHGIGRSNARQILSDLSMENK 87

Query: 342 ITKDLSEEELIILRDEVSKYMIEGDLRRFNGLNIRRLKEIQCYRGIRHIQGLPCRGQRTK 521
           ITKDLSEEELIILRDEVSKY IEGDLRRFN LNIRRLKEIQCYRGIRHIQGLPCRGQRTK
Sbjct: 88  ITKDLSEEELIILRDEVSKYTIEGDLRRFNALNIRRLKEIQCYRGIRHIQGLPCRGQRTK 147

Query: 522 NNCRTL 539
           NNCRTL
Sbjct: 148 NNCRTL 153


>ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Vitis
           vinifera] gi|302141873|emb|CBI19076.3| unnamed protein
           product [Vitis vinifera]
          Length = 167

 Score =  220 bits (561), Expect = 2e-55
 Identities = 112/135 (82%), Positives = 117/135 (86%), Gaps = 4/135 (2%)
 Frame = +3

Query: 147 THNPTS----LSFPISTTPKIGGLSIRCARVGGVEIPNAKRVQYSLQYIHGIGRTRALQI 314
           T NP S    LSF     PK GGLSI+CARVGGVEIPN+KRV+YSLQYIHGIGR+R+ QI
Sbjct: 19  TRNPLSPSNNLSFSTPAPPKFGGLSIKCARVGGVEIPNSKRVEYSLQYIHGIGRSRSKQI 78

Query: 315 LNDLKMENKITKDLSEEELIILRDEVSKYMIEGDLRRFNGLNIRRLKEIQCYRGIRHIQG 494
           L DL MENKITKDLSEEELI LRDEVSKYMIEGDLRRFN L IRRLKEIQCYRGIRHIQG
Sbjct: 79  LCDLGMENKITKDLSEEELITLRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQG 138

Query: 495 LPCRGQRTKNNCRTL 539
           LPCRGQRTKNNCRTL
Sbjct: 139 LPCRGQRTKNNCRTL 153


>gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea brasiliensis]
          Length = 168

 Score =  220 bits (560), Expect = 3e-55
 Identities = 108/127 (85%), Positives = 116/127 (91%)
 Frame = +3

Query: 159 TSLSFPISTTPKIGGLSIRCARVGGVEIPNAKRVQYSLQYIHGIGRTRALQILNDLKMEN 338
           T +S PIS  PKI GLSI+CARVGGVEIPN KRV+YSLQYIHG+GR+RA QIL+DL M+N
Sbjct: 27  TFVSLPISNPPKIHGLSIQCARVGGVEIPNNKRVEYSLQYIHGVGRSRARQILSDLSMQN 86

Query: 339 KITKDLSEEELIILRDEVSKYMIEGDLRRFNGLNIRRLKEIQCYRGIRHIQGLPCRGQRT 518
           KITKDLSEEELI LRDEVSKYMIEGDLRRFN LNIR LKEIQC+RGIRHIQGLPCRGQRT
Sbjct: 87  KITKDLSEEELITLRDEVSKYMIEGDLRRFNALNIRGLKEIQCHRGIRHIQGLPCRGQRT 146

Query: 519 KNNCRTL 539
           KNNCRTL
Sbjct: 147 KNNCRTL 153


>ref|XP_002306609.1| predicted protein [Populus trichocarpa] gi|222856058|gb|EEE93605.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  220 bits (560), Expect = 3e-55
 Identities = 107/127 (84%), Positives = 117/127 (92%)
 Frame = +3

Query: 159 TSLSFPISTTPKIGGLSIRCARVGGVEIPNAKRVQYSLQYIHGIGRTRALQILNDLKMEN 338
           +S+S P+S  PK+  LSIRCARVGGVEIPN+KRV+YSLQYIHGIGR+ A QIL+DL MEN
Sbjct: 27  SSISPPVSNPPKVCSLSIRCARVGGVEIPNSKRVEYSLQYIHGIGRSIARQILSDLTMEN 86

Query: 339 KITKDLSEEELIILRDEVSKYMIEGDLRRFNGLNIRRLKEIQCYRGIRHIQGLPCRGQRT 518
           KITKDLSE+ELI LRDEVSKYMIEGDLRRFN LNIRRLKEIQCYRG+RHIQGLPCRGQRT
Sbjct: 87  KITKDLSEDELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRT 146

Query: 519 KNNCRTL 539
           KNNCRTL
Sbjct: 147 KNNCRTL 153


>gb|AEC10995.1| 30S ribosomal protein s13 [Camellia sinensis]
          Length = 165

 Score =  216 bits (551), Expect = 3e-54
 Identities = 103/128 (80%), Positives = 112/128 (87%)
 Frame = +3

Query: 156 PTSLSFPISTTPKIGGLSIRCARVGGVEIPNAKRVQYSLQYIHGIGRTRALQILNDLKME 335
           P SLSFP  T PK GGLSI+C RVGGVEIPN KR++YSL+YIHGIGRT + QIL DL M+
Sbjct: 23  PNSLSFPSPTPPKFGGLSIKCVRVGGVEIPNNKRIEYSLRYIHGIGRTTSRQILVDLSMD 82

Query: 336 NKITKDLSEEELIILRDEVSKYMIEGDLRRFNGLNIRRLKEIQCYRGIRHIQGLPCRGQR 515
           NKITKDL EEELI  RD+VSKYM+EGD RRFN LNIRRLKEIQCYRG+RHIQGLPCRGQR
Sbjct: 83  NKITKDLFEEELISFRDQVSKYMVEGDFRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQR 142

Query: 516 TKNNCRTL 539
           TKNNCRTL
Sbjct: 143 TKNNCRTL 150