BLASTX nr result

ID: Cnidium21_contig00015319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015319
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001154707.1| DEAD-box ATP-dependent RNA helicase 56 [Arab...    68   1e-09
ref|NP_001154706.1| DEAD-box ATP-dependent RNA helicase 56 [Arab...    68   2e-09
emb|CBI21031.3| unnamed protein product [Vitis vinifera]               67   3e-09
ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    67   3e-09
ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    67   3e-09

>ref|NP_001154707.1| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana]
           gi|332004264|gb|AED91647.1| DEAD-box ATP-dependent RNA
           helicase 56 [Arabidopsis thaliana]
          Length = 468

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 31/35 (88%), Positives = 34/35 (97%)
 Frame = +1

Query: 562 SSLQPMEIYVDDEAKLTLHGLVQHYIKLSELEKNR 666
           S++ PMEIYVDDEAKLTLHGLVQHYIKLSE+EKNR
Sbjct: 284 SNIDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNR 318


>ref|NP_001154706.1| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana]
           gi|332004263|gb|AED91646.1| DEAD-box ATP-dependent RNA
           helicase 56 [Arabidopsis thaliana]
          Length = 486

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 7/65 (10%)
 Frame = +1

Query: 493 FTSLIL*WLPLASARLLTCLLCH-------SSLQPMEIYVDDEAKLTLHGLVQHYIKLSE 651
           F  ++L W+ +  A L+     H       + + PMEIYVDDEAKLTLHGLVQHYIKLSE
Sbjct: 272 FGFIVLVWVSMFRAILMFHSKTHIFEEKRWTRISPMEIYVDDEAKLTLHGLVQHYIKLSE 331

Query: 652 LEKNR 666
           +EKNR
Sbjct: 332 MEKNR 336


>emb|CBI21031.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 33/39 (84%), Positives = 35/39 (89%), Gaps = 1/39 (2%)
 Frame = +1

Query: 553 LCHSSLQ-PMEIYVDDEAKLTLHGLVQHYIKLSELEKNR 666
           +C   +Q PMEIYVDDEAKLTLHGLVQHYIKLSELEKNR
Sbjct: 304 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNR 342


>ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Vitis vinifera]
           gi|297743441|emb|CBI36308.3| unnamed protein product
           [Vitis vinifera]
          Length = 428

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 33/39 (84%), Positives = 35/39 (89%), Gaps = 1/39 (2%)
 Frame = +1

Query: 553 LCHSSLQ-PMEIYVDDEAKLTLHGLVQHYIKLSELEKNR 666
           +C   +Q PMEIYVDDEAKLTLHGLVQHYIKLSELEKNR
Sbjct: 240 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNR 278


>ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Vitis
           vinifera]
          Length = 428

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 33/39 (84%), Positives = 35/39 (89%), Gaps = 1/39 (2%)
 Frame = +1

Query: 553 LCHSSLQ-PMEIYVDDEAKLTLHGLVQHYIKLSELEKNR 666
           +C   +Q PMEIYVDDEAKLTLHGLVQHYIKLSELEKNR
Sbjct: 240 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNR 278


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