BLASTX nr result

ID: Cnidium21_contig00015315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015315
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307009.1| predicted protein [Populus trichocarpa] gi|1...   184   5e-45
ref|XP_002301890.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
ref|NP_001117322.1| PLATZ transcription factor domain-containing...   181   7e-44
ref|NP_564128.1| PLATZ transcription factor domain-containing pr...   181   7e-44
ref|XP_002890421.1| zinc-binding family protein [Arabidopsis lyr...   179   2e-43

>ref|XP_002307009.1| predicted protein [Populus trichocarpa] gi|118489570|gb|ABK96587.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222856458|gb|EEE94005.1| predicted protein [Populus
           trichocarpa]
          Length = 238

 Score =  184 bits (468), Expect = 5e-45
 Identities = 85/103 (82%), Positives = 92/103 (89%)
 Frame = +2

Query: 56  CVPCQPAQVASSTFCSYCTIYHKDHHVIQIRRSSYHNVVRVHEIQKFIDIACVQTYIINS 235
           C+ C       + FCSYC IYHKDH V+QIRRSSYHNVVRV+EIQK+IDI+CVQTYIINS
Sbjct: 45  CLDCM-----GNAFCSYCLIYHKDHRVVQIRRSSYHNVVRVNEIQKYIDISCVQTYIINS 99

Query: 236 ARIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRFCSLGCKLG 364
           A+IVFLNERPQPRPGKGVTNTCEICCRSLLDSFRFCSLGCKLG
Sbjct: 100 AKIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRFCSLGCKLG 142


>ref|XP_002301890.1| predicted protein [Populus trichocarpa] gi|222843616|gb|EEE81163.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  183 bits (465), Expect = 1e-44
 Identities = 84/103 (81%), Positives = 92/103 (89%)
 Frame = +2

Query: 56  CVPCQPAQVASSTFCSYCTIYHKDHHVIQIRRSSYHNVVRVHEIQKFIDIACVQTYIINS 235
           C+ C       + FCSYC IYH+DH V+QIRRSSYHNVVRV+EIQK+IDI+CVQTYIINS
Sbjct: 45  CLDCM-----GNAFCSYCLIYHRDHRVVQIRRSSYHNVVRVNEIQKYIDISCVQTYIINS 99

Query: 236 ARIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRFCSLGCKLG 364
           A+IVFLNERPQPRPGKGVTNTCEICCRSLLDSFRFCSLGCKLG
Sbjct: 100 AKIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRFCSLGCKLG 142


>ref|NP_001117322.1| PLATZ transcription factor domain-containing protein [Arabidopsis
           thaliana] gi|4836888|gb|AAD30591.1|AC007369_1 Unknown
           protein [Arabidopsis thaliana]
           gi|13877713|gb|AAK43934.1|AF370615_1 Unknown protein
           [Arabidopsis thaliana] gi|332191932|gb|AEE30053.1| PLATZ
           transcription factor domain-containing protein
           [Arabidopsis thaliana]
          Length = 243

 Score =  181 bits (458), Expect = 7e-44
 Identities = 85/103 (82%), Positives = 91/103 (88%)
 Frame = +2

Query: 56  CVPCQPAQVASSTFCSYCTIYHKDHHVIQIRRSSYHNVVRVHEIQKFIDIACVQTYIINS 235
           C+ C     A + FCSYC + HKDH V+QIRRSSYHNVVRV+EIQKFIDIACVQTYIINS
Sbjct: 43  CLDC-----AGNAFCSYCLVKHKDHRVVQIRRSSYHNVVRVNEIQKFIDIACVQTYIINS 97

Query: 236 ARIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRFCSLGCKLG 364
           A+IVFLNERPQPR GKGVTNTCEICCRSLLDSFRFCSLGCKLG
Sbjct: 98  AKIVFLNERPQPRIGKGVTNTCEICCRSLLDSFRFCSLGCKLG 140


>ref|NP_564128.1| PLATZ transcription factor domain-containing protein [Arabidopsis
           thaliana] gi|14030627|gb|AAK52988.1|AF375404_1
           At1g21000/F9H16_1 [Arabidopsis thaliana]
           gi|16226407|gb|AAL16160.1|AF428392_1 At1g21000/F9H16_1
           [Arabidopsis thaliana] gi|22136542|gb|AAM91057.1|
           At1g21000/F9H16_1 [Arabidopsis thaliana]
           gi|332191931|gb|AEE30052.1| PLATZ transcription factor
           domain-containing protein [Arabidopsis thaliana]
          Length = 246

 Score =  181 bits (458), Expect = 7e-44
 Identities = 85/103 (82%), Positives = 91/103 (88%)
 Frame = +2

Query: 56  CVPCQPAQVASSTFCSYCTIYHKDHHVIQIRRSSYHNVVRVHEIQKFIDIACVQTYIINS 235
           C+ C     A + FCSYC + HKDH V+QIRRSSYHNVVRV+EIQKFIDIACVQTYIINS
Sbjct: 46  CLDC-----AGNAFCSYCLVKHKDHRVVQIRRSSYHNVVRVNEIQKFIDIACVQTYIINS 100

Query: 236 ARIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRFCSLGCKLG 364
           A+IVFLNERPQPR GKGVTNTCEICCRSLLDSFRFCSLGCKLG
Sbjct: 101 AKIVFLNERPQPRIGKGVTNTCEICCRSLLDSFRFCSLGCKLG 143


>ref|XP_002890421.1| zinc-binding family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336263|gb|EFH66680.1| zinc-binding family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 246

 Score =  179 bits (455), Expect = 2e-43
 Identities = 84/103 (81%), Positives = 91/103 (88%)
 Frame = +2

Query: 56  CVPCQPAQVASSTFCSYCTIYHKDHHVIQIRRSSYHNVVRVHEIQKFIDIACVQTYIINS 235
           C+ C     A + FCSYC + HKDH V+QIRRSSYHNVVRV+EIQKFIDI+CVQTYIINS
Sbjct: 46  CLDC-----AGNAFCSYCLVKHKDHRVVQIRRSSYHNVVRVNEIQKFIDISCVQTYIINS 100

Query: 236 ARIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRFCSLGCKLG 364
           A+IVFLNERPQPR GKGVTNTCEICCRSLLDSFRFCSLGCKLG
Sbjct: 101 AKIVFLNERPQPRIGKGVTNTCEICCRSLLDSFRFCSLGCKLG 143


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