BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015302
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625914.1| U6 snRNA-associated Sm-like protein LSm4 [Me...   180   2e-43
ref|XP_002874352.1| hypothetical protein ARALYDRAFT_326933 [Arab...   180   2e-43
emb|CBI36838.3| unnamed protein product [Vitis vinifera]              179   2e-43
ref|NP_198124.1| U6 snRNA-associated Sm-like protein LSm4 [Arabi...   179   4e-43
tpg|DAA53991.1| TPA: hypothetical protein ZEAMMB73_426325 [Zea m...   179   4e-43

>ref|XP_003625914.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
           gi|357516335|ref|XP_003628456.1| U6 snRNA-associated
           Sm-like protein LSm4 [Medicago truncatula]
           gi|355500929|gb|AES82132.1| U6 snRNA-associated Sm-like
           protein LSm4 [Medicago truncatula]
           gi|355522478|gb|AET02932.1| U6 snRNA-associated Sm-like
           protein LSm4 [Medicago truncatula]
          Length = 150

 Score =  180 bits (456), Expect = 2e-43
 Identities = 83/84 (98%), Positives = 84/84 (100%)
 Frame = -3

Query: 404 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 225
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 224 IRGNTIKYLRVPDEVIDKVQEEKS 153
           IRGNTIKYLRVPDEVIDKVQEEKS
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEEKS 84


>ref|XP_002874352.1| hypothetical protein ARALYDRAFT_326933 [Arabidopsis lyrata subsp.
           lyrata] gi|297320189|gb|EFH50611.1| hypothetical protein
           ARALYDRAFT_326933 [Arabidopsis lyrata subsp. lyrata]
          Length = 143

 Score =  180 bits (456), Expect = 2e-43
 Identities = 83/84 (98%), Positives = 84/84 (100%)
 Frame = -3

Query: 404 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 225
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 224 IRGNTIKYLRVPDEVIDKVQEEKS 153
           IRGNTIKYLRVPDEVIDKVQEEKS
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEEKS 84


>emb|CBI36838.3| unnamed protein product [Vitis vinifera]
          Length = 196

 Score =  179 bits (455), Expect = 2e-43
 Identities = 84/88 (95%), Positives = 85/88 (96%)
 Frame = -3

Query: 422 FRALETMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFW 243
           F AL  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FW
Sbjct: 41  FCALVKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFW 100

Query: 242 RMPECYIRGNTIKYLRVPDEVIDKVQEE 159
           RMPECYIRGNTIKYLRVPDEVIDKVQEE
Sbjct: 101 RMPECYIRGNTIKYLRVPDEVIDKVQEE 128


>ref|NP_198124.1| U6 snRNA-associated Sm-like protein LSm4 [Arabidopsis thaliana]
           gi|332006335|gb|AED93718.1| U6 snRNA-associated Sm-like
           protein LSm4 [Arabidopsis thaliana]
          Length = 129

 Score =  179 bits (453), Expect = 4e-43
 Identities = 82/84 (97%), Positives = 84/84 (100%)
 Frame = -3

Query: 404 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 225
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 224 IRGNTIKYLRVPDEVIDKVQEEKS 153
           IRGNTIKYLRVPDEVIDKVQEEK+
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEEKT 84


>tpg|DAA53991.1| TPA: hypothetical protein ZEAMMB73_426325 [Zea mays]
          Length = 172

 Score =  179 bits (453), Expect = 4e-43
 Identities = 83/84 (98%), Positives = 83/84 (98%)
 Frame = -3

Query: 404 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 225
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60

Query: 224 IRGNTIKYLRVPDEVIDKVQEEKS 153
           IRGNTIKYLRVPDEVIDKVQEE S
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETS 84