BLASTX nr result
ID: Cnidium21_contig00015242
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00015242
(824 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002301157.1| predicted protein [Populus trichocarpa] gi|2... 206 5e-61
ref|XP_002327190.1| predicted protein [Populus trichocarpa] gi|2... 207 2e-59
emb|CAA63541.1| cyclin A-like protein [Nicotiana tabacum] 202 5e-59
emb|CAA63753.1| cyclin A-like protein [Nicotiana tabacum] 203 1e-58
gb|AFK65510.1| cyclin A, partial [Dimocarpus longan] 202 1e-58
>ref|XP_002301157.1| predicted protein [Populus trichocarpa] gi|222842883|gb|EEE80430.1|
predicted protein [Populus trichocarpa]
Length = 360
Score = 206 bits (525), Expect(3) = 5e-61
Identities = 99/131 (75%), Positives = 118/131 (90%)
Frame = +3
Query: 186 DGDSDDPQMCSAYASDIYQYLRNMEIETKR*PLPNDIEKVQKDVTVNMRAILVDWLVEVA 365
DG+ +DPQMC+ YASDIY+YL ME++ KR PLP+ IEKVQKDV+ NMR ILVDWLVEVA
Sbjct: 80 DGNPEDPQMCAPYASDIYEYLHKMEVDPKRRPLPDYIEKVQKDVSPNMRGILVDWLVEVA 139
Query: 366 LEYKLLADTLYLTVSYIDRYLSINVLNRQRLQLLGISSMLIASKYEEINPPYVECFCDIT 545
EYKL+++TLYLTVSY+DR+LS NVL+RQRLQLLG+SSML+ASKYEEINPP+VE FC IT
Sbjct: 140 EEYKLVSETLYLTVSYVDRFLSFNVLSRQRLQLLGVSSMLLASKYEEINPPHVEDFCYIT 199
Query: 546 DNTYTKKDVVK 578
DNTYTK++VVK
Sbjct: 200 DNTYTKEEVVK 210
Score = 50.4 bits (119), Expect(3) = 5e-61
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +1
Query: 562 KKML*KMEADVLKSLKFEMGNPTVKTFLR 648
K+ + KMEAD+LKSLKFEMGNPT+KTFLR
Sbjct: 205 KEEVVKMEADILKSLKFEMGNPTIKTFLR 233
Score = 25.4 bits (54), Expect(3) = 5e-61
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 37 QPFNKKRSVLAEIPS 81
QP NKKR VL E+P+
Sbjct: 27 QPLNKKRVVLGELPN 41
>ref|XP_002327190.1| predicted protein [Populus trichocarpa] gi|222835505|gb|EEE73940.1|
predicted protein [Populus trichocarpa]
Length = 363
Score = 207 bits (526), Expect(3) = 2e-59
Identities = 101/131 (77%), Positives = 116/131 (88%)
Frame = +3
Query: 186 DGDSDDPQMCSAYASDIYQYLRNMEIETKR*PLPNDIEKVQKDVTVNMRAILVDWLVEVA 365
DG +DPQMC+ YASDIY+YL ME++ KR PLP+ IEKVQKDV+ NMR ILVDWLVEVA
Sbjct: 83 DGKPEDPQMCAPYASDIYEYLHKMEVDPKRRPLPDYIEKVQKDVSPNMRGILVDWLVEVA 142
Query: 366 LEYKLLADTLYLTVSYIDRYLSINVLNRQRLQLLGISSMLIASKYEEINPPYVECFCDIT 545
EYK+++DTLYLTVSYIDR+LS NVLNRQRLQLLG+S+MLIASKYEEINPP VE FC IT
Sbjct: 143 EEYKIVSDTLYLTVSYIDRFLSFNVLNRQRLQLLGVSAMLIASKYEEINPPNVEDFCYIT 202
Query: 546 DNTYTKKDVVK 578
DNTYTK++VVK
Sbjct: 203 DNTYTKEEVVK 213
Score = 46.6 bits (109), Expect(3) = 2e-59
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +1
Query: 562 KKML*KMEADVLKSLKFEMGNPTVKTFLR 648
K+ + KMEAD+LKSLKFE+GNPT+KT LR
Sbjct: 208 KEEVVKMEADILKSLKFEVGNPTIKTLLR 236
Score = 23.9 bits (50), Expect(3) = 2e-59
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 37 QPFNKKRSVLAEIPS 81
+P NKKR VL E+P+
Sbjct: 30 RPLNKKRVVLGELPN 44
>emb|CAA63541.1| cyclin A-like protein [Nicotiana tabacum]
Length = 384
Score = 202 bits (514), Expect(2) = 5e-59
Identities = 98/131 (74%), Positives = 115/131 (87%)
Frame = +3
Query: 186 DGDSDDPQMCSAYASDIYQYLRNMEIETKR*PLPNDIEKVQKDVTVNMRAILVDWLVEVA 365
D + DDPQMCSAY SDIY YLR MEIE KR PLP+ +EKVQKD++ NMR +LVDWLVEVA
Sbjct: 101 DANYDDPQMCSAYVSDIYDYLRKMEIEEKRRPLPDYLEKVQKDLSPNMRGVLVDWLVEVA 160
Query: 366 LEYKLLADTLYLTVSYIDRYLSINVLNRQRLQLLGISSMLIASKYEEINPPYVECFCDIT 545
EYKLL+DTLYL VSYIDR+LS NV+ RQ+LQLLG+SSMLI++KYEEI+PP+VE FC IT
Sbjct: 161 EEYKLLSDTLYLAVSYIDRFLSTNVITRQKLQLLGVSSMLISAKYEEISPPHVEDFCYIT 220
Query: 546 DNTYTKKDVVK 578
DNTYTK++VVK
Sbjct: 221 DNTYTKEEVVK 231
Score = 52.4 bits (124), Expect(2) = 5e-59
Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +1
Query: 562 KKML*KMEADVLKSLKFEMGNPTVKTFLRYSCGV-HEEFQLPLFKKE 699
K+ + KMEADVLK+L FEMGNPTVKTFLR GV E+++ P + E
Sbjct: 226 KEEVVKMEADVLKTLNFEMGNPTVKTFLRRFTGVAQEDYKTPNLQLE 272
>emb|CAA63753.1| cyclin A-like protein [Nicotiana tabacum]
Length = 314
Score = 203 bits (517), Expect(2) = 1e-58
Identities = 102/127 (80%), Positives = 110/127 (86%)
Frame = +3
Query: 198 DDPQMCSAYASDIYQYLRNMEIETKR*PLPNDIEKVQKDVTVNMRAILVDWLVEVALEYK 377
DDPQMCSAY SDIY+YL MEIE KR PL + +EKVQKDVT NMR +LVDWLVEVA EYK
Sbjct: 89 DDPQMCSAYVSDIYEYLHQMEIEKKRRPLSDYLEKVQKDVTANMRGVLVDWLVEVAEEYK 148
Query: 378 LLADTLYLTVSYIDRYLSINVLNRQRLQLLGISSMLIASKYEEINPPYVECFCDITDNTY 557
LL+DTLYL V+YIDRYLSI V+ RQRLQLLG+SSMLIASKYEEI PP VE FC ITDNTY
Sbjct: 149 LLSDTLYLAVAYIDRYLSIKVIPRQRLQLLGVSSMLIASKYEEIKPPRVEDFCYITDNTY 208
Query: 558 TKKDVVK 578
TKKDVVK
Sbjct: 209 TKKDVVK 215
Score = 50.1 bits (118), Expect(2) = 1e-58
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +1
Query: 562 KKML*KMEADVLKSLKFEMGNPTVKTFLRYSCGVHEE 672
KK + KMEADVL+SLKFEMGNPT KTFLR V +E
Sbjct: 210 KKDVVKMEADVLQSLKFEMGNPTTKTFLRRFTRVAQE 246
>gb|AFK65510.1| cyclin A, partial [Dimocarpus longan]
Length = 382
Score = 202 bits (514), Expect(2) = 1e-58
Identities = 99/131 (75%), Positives = 116/131 (88%)
Frame = +3
Query: 186 DGDSDDPQMCSAYASDIYQYLRNMEIETKR*PLPNDIEKVQKDVTVNMRAILVDWLVEVA 365
D SD+PQMC AYA+DIY+YLR+ME+E KR PLP+ IEKVQKDV+ NMR ILVDWLVEV+
Sbjct: 85 DFTSDNPQMCGAYATDIYEYLRDMEVEPKRRPLPDYIEKVQKDVSANMRGILVDWLVEVS 144
Query: 366 LEYKLLADTLYLTVSYIDRYLSINVLNRQRLQLLGISSMLIASKYEEINPPYVECFCDIT 545
EYKL +DTLYLTVSYID +LS+NV+NRQ+LQLLG+SSMLIASKYEEI+PP VE FC IT
Sbjct: 145 EEYKLFSDTLYLTVSYIDGFLSLNVINRQKLQLLGVSSMLIASKYEEISPPNVEDFCYIT 204
Query: 546 DNTYTKKDVVK 578
DNTY K++VVK
Sbjct: 205 DNTYAKQEVVK 215
Score = 50.8 bits (120), Expect(2) = 1e-58
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = +1
Query: 562 KKML*KMEADVLKSLKFEMGNPTVKTFLRYSCGVHEE 672
K+ + KMEADVLK+LKFEMGNPTVKTFLR V +E
Sbjct: 210 KQEVVKMEADVLKALKFEMGNPTVKTFLRRLSRVAQE 246