BLASTX nr result

ID: Cnidium21_contig00015236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015236
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540566.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   118   7e-25
ref|XP_002510641.1| conserved hypothetical protein [Ricinus comm...   118   9e-25
ref|XP_002285922.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   113   2e-23
ref|NP_565128.1| uncharacterized protein [Arabidopsis thaliana] ...   112   4e-23
gb|AFK49070.1| unknown [Lotus japonicus]                              112   4e-23

>ref|XP_003540566.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 2 [Glycine max]
          Length = 67

 Score =  118 bits (296), Expect = 7e-25
 Identities = 46/54 (85%), Positives = 51/54 (94%)
 Frame = -1

Query: 518 GGDGHGITYKGVTIHQPKRWHSITGKGMCAMMWFWILYRAKKDGPVVLGWRHPW 357
           GG GHG TYKGVTIHQPKRWH+ITGKG+CA+MWFW+ YRAK+DGPVVLGWRHPW
Sbjct: 3   GGQGHGTTYKGVTIHQPKRWHTITGKGLCAVMWFWVFYRAKQDGPVVLGWRHPW 56


>ref|XP_002510641.1| conserved hypothetical protein [Ricinus communis]
           gi|223551342|gb|EEF52828.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 69

 Score =  118 bits (295), Expect = 9e-25
 Identities = 48/54 (88%), Positives = 51/54 (94%)
 Frame = -1

Query: 518 GGDGHGITYKGVTIHQPKRWHSITGKGMCAMMWFWILYRAKKDGPVVLGWRHPW 357
           GG G G TYKGVTIHQPKRWHSITGKG+CA+MWFWILYRAK+DGPVVLGWRHPW
Sbjct: 3   GGHGEGYTYKGVTIHQPKRWHSITGKGLCAVMWFWILYRAKQDGPVVLGWRHPW 56


>ref|XP_002285922.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 2-like [Vitis vinifera]
          Length = 69

 Score =  113 bits (283), Expect = 2e-23
 Identities = 43/54 (79%), Positives = 50/54 (92%)
 Frame = -1

Query: 518 GGDGHGITYKGVTIHQPKRWHSITGKGMCAMMWFWILYRAKKDGPVVLGWRHPW 357
           GG GH  TYKGVT+H PKRWH+ITGKG+CA+MWFW++YRAK+DGPVVLGWRHPW
Sbjct: 4   GGHGHSTTYKGVTMHHPKRWHTITGKGLCAIMWFWVMYRAKQDGPVVLGWRHPW 57


>ref|NP_565128.1| uncharacterized protein [Arabidopsis thaliana]
           gi|297839497|ref|XP_002887630.1| hypothetical protein
           ARALYDRAFT_476772 [Arabidopsis lyrata subsp. lyrata]
           gi|75155465|sp|Q8LDK3.1|NDUB2_ARATH RecName: Full=NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2
           gi|21554093|gb|AAM63174.1| unknown [Arabidopsis
           thaliana] gi|106879141|gb|ABF82600.1| At1g76200
           [Arabidopsis thaliana] gi|110740810|dbj|BAE98502.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|297333471|gb|EFH63889.1| hypothetical protein
           ARALYDRAFT_476772 [Arabidopsis lyrata subsp. lyrata]
           gi|332197689|gb|AEE35810.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 69

 Score =  112 bits (281), Expect = 4e-23
 Identities = 45/57 (78%), Positives = 52/57 (91%), Gaps = 2/57 (3%)
 Frame = -1

Query: 521 MGGDGHG--ITYKGVTIHQPKRWHSITGKGMCAMMWFWILYRAKKDGPVVLGWRHPW 357
           MGG GHG  ITYKGVT+H PK WH++TGKG+CA+MWFWILYRAK+DGPVV+GWRHPW
Sbjct: 1   MGGGGHGGGITYKGVTVHTPKTWHTVTGKGLCAVMWFWILYRAKQDGPVVMGWRHPW 57


>gb|AFK49070.1| unknown [Lotus japonicus]
          Length = 66

 Score =  112 bits (281), Expect = 4e-23
 Identities = 43/54 (79%), Positives = 50/54 (92%)
 Frame = -1

Query: 518 GGDGHGITYKGVTIHQPKRWHSITGKGMCAMMWFWILYRAKKDGPVVLGWRHPW 357
           GG G G TYKGVT+H PKRWH++TGKG+CA+MWFW+LYRAK+DGPVVLGWRHPW
Sbjct: 3   GGHGGGTTYKGVTVHTPKRWHAVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPW 56


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