BLASTX nr result
ID: Cnidium21_contig00015236
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00015236 (605 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003540566.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1... 118 7e-25 ref|XP_002510641.1| conserved hypothetical protein [Ricinus comm... 118 9e-25 ref|XP_002285922.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1... 113 2e-23 ref|NP_565128.1| uncharacterized protein [Arabidopsis thaliana] ... 112 4e-23 gb|AFK49070.1| unknown [Lotus japonicus] 112 4e-23 >ref|XP_003540566.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Glycine max] Length = 67 Score = 118 bits (296), Expect = 7e-25 Identities = 46/54 (85%), Positives = 51/54 (94%) Frame = -1 Query: 518 GGDGHGITYKGVTIHQPKRWHSITGKGMCAMMWFWILYRAKKDGPVVLGWRHPW 357 GG GHG TYKGVTIHQPKRWH+ITGKG+CA+MWFW+ YRAK+DGPVVLGWRHPW Sbjct: 3 GGQGHGTTYKGVTIHQPKRWHTITGKGLCAVMWFWVFYRAKQDGPVVLGWRHPW 56 >ref|XP_002510641.1| conserved hypothetical protein [Ricinus communis] gi|223551342|gb|EEF52828.1| conserved hypothetical protein [Ricinus communis] Length = 69 Score = 118 bits (295), Expect = 9e-25 Identities = 48/54 (88%), Positives = 51/54 (94%) Frame = -1 Query: 518 GGDGHGITYKGVTIHQPKRWHSITGKGMCAMMWFWILYRAKKDGPVVLGWRHPW 357 GG G G TYKGVTIHQPKRWHSITGKG+CA+MWFWILYRAK+DGPVVLGWRHPW Sbjct: 3 GGHGEGYTYKGVTIHQPKRWHSITGKGLCAVMWFWILYRAKQDGPVVLGWRHPW 56 >ref|XP_002285922.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2-like [Vitis vinifera] Length = 69 Score = 113 bits (283), Expect = 2e-23 Identities = 43/54 (79%), Positives = 50/54 (92%) Frame = -1 Query: 518 GGDGHGITYKGVTIHQPKRWHSITGKGMCAMMWFWILYRAKKDGPVVLGWRHPW 357 GG GH TYKGVT+H PKRWH+ITGKG+CA+MWFW++YRAK+DGPVVLGWRHPW Sbjct: 4 GGHGHSTTYKGVTMHHPKRWHTITGKGLCAIMWFWVMYRAKQDGPVVLGWRHPW 57 >ref|NP_565128.1| uncharacterized protein [Arabidopsis thaliana] gi|297839497|ref|XP_002887630.1| hypothetical protein ARALYDRAFT_476772 [Arabidopsis lyrata subsp. lyrata] gi|75155465|sp|Q8LDK3.1|NDUB2_ARATH RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 gi|21554093|gb|AAM63174.1| unknown [Arabidopsis thaliana] gi|106879141|gb|ABF82600.1| At1g76200 [Arabidopsis thaliana] gi|110740810|dbj|BAE98502.1| hypothetical protein [Arabidopsis thaliana] gi|297333471|gb|EFH63889.1| hypothetical protein ARALYDRAFT_476772 [Arabidopsis lyrata subsp. lyrata] gi|332197689|gb|AEE35810.1| uncharacterized protein [Arabidopsis thaliana] Length = 69 Score = 112 bits (281), Expect = 4e-23 Identities = 45/57 (78%), Positives = 52/57 (91%), Gaps = 2/57 (3%) Frame = -1 Query: 521 MGGDGHG--ITYKGVTIHQPKRWHSITGKGMCAMMWFWILYRAKKDGPVVLGWRHPW 357 MGG GHG ITYKGVT+H PK WH++TGKG+CA+MWFWILYRAK+DGPVV+GWRHPW Sbjct: 1 MGGGGHGGGITYKGVTVHTPKTWHTVTGKGLCAVMWFWILYRAKQDGPVVMGWRHPW 57 >gb|AFK49070.1| unknown [Lotus japonicus] Length = 66 Score = 112 bits (281), Expect = 4e-23 Identities = 43/54 (79%), Positives = 50/54 (92%) Frame = -1 Query: 518 GGDGHGITYKGVTIHQPKRWHSITGKGMCAMMWFWILYRAKKDGPVVLGWRHPW 357 GG G G TYKGVT+H PKRWH++TGKG+CA+MWFW+LYRAK+DGPVVLGWRHPW Sbjct: 3 GGHGGGTTYKGVTVHTPKRWHAVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPW 56