BLASTX nr result
ID: Cnidium21_contig00015225
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00015225
(2034 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containin... 572 0.0
ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containin... 567 0.0
ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containin... 552 0.0
ref|XP_002514115.1| nucleic acid binding protein, putative [Rici... 540 e-180
emb|CBI27906.3| unnamed protein product [Vitis vinifera] 567 e-175
>ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
[Glycine max]
Length = 601
Score = 572 bits (1474), Expect(2) = 0.0
Identities = 275/399 (68%), Positives = 327/399 (81%), Gaps = 5/399 (1%)
Frame = +1
Query: 319 GTRGVFYSREPYANIDAVHVTRFIGLAPVGNADKQKFIHALSPTPAATMAATEISMKPTN 498
GT+G++Y+REPY+N+DAVHVTRFIGLA VGN DKQKFIHA+SPTPA+TM++TEI+MK TN
Sbjct: 204 GTKGIYYAREPYSNVDAVHVTRFIGLASVGNKDKQKFIHAISPTPASTMSSTEIAMKTTN 263
Query: 499 TTCSPYA---SLNNTSHEGKRSSEDISDSQYWRYDVSKKRQKH--GDGDRLCFKFVSSGS 663
TT SPY + KRSS+ ISD QYWRYDVS+KRQKH G GD+LCFKFVSSGS
Sbjct: 264 TTLSPYTYEEKRTSPMDSTKRSSDSISDPQYWRYDVSQKRQKHEAGHGDKLCFKFVSSGS 323
Query: 664 CQHGEQCHFRHDVEAREQSLRGVCFDFMNKGKCERGPDCNFKHSLQEEGGNGSIRRPKGN 843
C GE+C+FRHD +AREQ +RGVCFDF+NKGKCERGPDCNFKHSLQ+EGG RRP
Sbjct: 324 CPRGEKCNFRHDTDAREQCMRGVCFDFLNKGKCERGPDCNFKHSLQDEGGRLPSRRP--G 381
Query: 844 TDRSKECWFCLSSPNVESHLITSIGEHCYCALAKGPLVPDHVLILPVEHLPNTLSSPEEC 1023
+ RSKECWFCLSSPNVESHLI SIGE+ Y ALAKGPLV DHVLI+PVEH+P+TLS E
Sbjct: 382 SGRSKECWFCLSSPNVESHLIISIGENYYLALAKGPLVEDHVLIIPVEHMPSTLSMSSES 441
Query: 1024 EIDIVKFQNSLRSYFKEQAMEVVFFEWIYIRGTHANLQAIPIPSSRAVSLHVVFNLAAER 1203
EI++ +FQNSL+SY K Q EV+FFEW+ +RGTHAN+QAIPIPSS+A+ +FNLAA++
Sbjct: 442 EIELSRFQNSLKSYCKSQEKEVIFFEWVSVRGTHANIQAIPIPSSKAIMAEKIFNLAAQK 501
Query: 1204 MGFKFQIFKNDTSSEGRNILRKQFNRNCSLFYVELPGGTILSHAVEEGEKFPAQFGREVL 1383
+GF+F K D+ SEGR L+ Q + + SLFY ++PGGTIL H VEE EKFPAQFGREVL
Sbjct: 502 LGFEFVTKKFDSISEGRKFLKAQIDGDSSLFYAQIPGGTILLHHVEEKEKFPAQFGREVL 561
Query: 1384 AGLLNMADRADWRNCKLSKDEEIKMAENFKNSFEKYDPN 1500
AGLLNMAD ADWRN K SKDEE+K+ E FK+ F++YDPN
Sbjct: 562 AGLLNMADNADWRNRKHSKDEEMKIVEVFKSRFQEYDPN 600
Score = 111 bits (277), Expect(2) = 0.0
Identities = 50/82 (60%), Positives = 66/82 (80%)
Frame = +2
Query: 41 SIELSSGKQSASGQPYGTYSQDDVDALRALAEEPGIIDIFLTNDWPSGILNGVLTTDIPP 220
S+ SG++S+S Q +GTY++DDVDALRA+AEEPGI+D+FLTN+WPSG+ N +DIP
Sbjct: 118 SVAYLSGRKSSSAQQFGTYTEDDVDALRAIAEEPGIVDLFLTNEWPSGVTNRAADSDIPA 177
Query: 221 EIPDLSGTDSTISELVAEIKPR 286
+ D +G DST+SELV EIKPR
Sbjct: 178 GLSDAAGGDSTVSELVQEIKPR 199
>ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containing protein 64-like [Vitis
vinifera]
Length = 607
Score = 567 bits (1461), Expect(2) = 0.0
Identities = 273/403 (67%), Positives = 322/403 (79%), Gaps = 8/403 (1%)
Frame = +1
Query: 319 GTRGVFYSREPYANIDAVHVTRFIGLAPVGNADKQKFIHALSPTPAATMAATEISMKPTN 498
GT+G+FY REPY+N+DAVHVTRF+GLAPVGN DKQKFIHA+SP PA+TM++ EISMKP N
Sbjct: 205 GTKGIFYDREPYSNLDAVHVTRFLGLAPVGNKDKQKFIHAISPIPASTMSSAEISMKPPN 264
Query: 499 TTCSPYASLNNTSHEG---KRSSEDISDSQYWRYDVSKKRQKHG--DGDRLCFKFVSSGS 663
TT PY + T+ KR S+ ISD+QYWRYDVS+KRQKHG DGD+LCFKFVSSGS
Sbjct: 265 TTLFPYKIIEETAPTNQATKRPSDSISDTQYWRYDVSQKRQKHGAGDGDKLCFKFVSSGS 324
Query: 664 CQHGEQCHFRHDVEAREQSLRGVCFDFMNKGKCERGPDCNFKHSLQEEGGNGSIRRP--- 834
C G +C+F HD EAREQ +RGVCFDF+NKGKCERGPDCNFKHSLQ+E + RR
Sbjct: 325 CPRGNKCNFLHDTEAREQYMRGVCFDFINKGKCERGPDCNFKHSLQDEDEGFASRRSGSE 384
Query: 835 KGNTDRSKECWFCLSSPNVESHLITSIGEHCYCALAKGPLVPDHVLILPVEHLPNTLSSP 1014
+ RSK CWFCLSSP+VESHLI SIGE YCALAKGPLV D VL++PVEH NTLS P
Sbjct: 385 NAKSSRSKRCWFCLSSPDVESHLIISIGESYYCALAKGPLVEDQVLVIPVEHSANTLSLP 444
Query: 1015 EECEIDIVKFQNSLRSYFKEQAMEVVFFEWIYIRGTHANLQAIPIPSSRAVSLHVVFNLA 1194
ECEI++ +FQ SL+ YF+ Q EVVFFEWI+ RGTHAN+QA+PIP SRA ++ +F LA
Sbjct: 445 PECEIELDRFQKSLKMYFRTQGKEVVFFEWIFKRGTHANIQAVPIPLSRASAVKNIFILA 504
Query: 1195 AERMGFKFQIFKNDTSSEGRNILRKQFNRNCSLFYVELPGGTILSHAVEEGEKFPAQFGR 1374
AE++GF+F K++ SEGR LR QF+ S FYVELP GTILSHA+E+ EKFP QFGR
Sbjct: 505 AEKLGFQFVTTKSNNDSEGRKSLRAQFDDKISFFYVELPDGTILSHAIEDNEKFPVQFGR 564
Query: 1375 EVLAGLLNMADRADWRNCKLSKDEEIKMAENFKNSFEKYDPNQ 1503
EVLAGLLNMADRADWRNCK SK++E+KMAE FKN F+K+DP Q
Sbjct: 565 EVLAGLLNMADRADWRNCKQSKEDEMKMAEVFKNQFKKFDPYQ 607
Score = 113 bits (282), Expect(2) = 0.0
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = +2
Query: 41 SIELSSGKQSASGQPYGTYSQDDVDALRALAEEPGIIDIFLTNDWPSGILNGVLTTDIPP 220
S+ SG++S GQ +G YSQDDVDALRALA+E GI+D+FLTN+WPSG+ G +T++IPP
Sbjct: 119 SVVYISGRRSLDGQQFGKYSQDDVDALRALADESGIVDLFLTNEWPSGVTKGAVTSNIPP 178
Query: 221 EIPDLSGTDSTISELVAEIKPR 286
I D SG DS ISELV EIKPR
Sbjct: 179 GISDSSGCDSAISELVGEIKPR 200
>ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
[Cucumis sativus] gi|449489882|ref|XP_004158448.1|
PREDICTED: zinc finger CCCH domain-containing protein
64-like [Cucumis sativus]
Length = 606
Score = 552 bits (1423), Expect(2) = 0.0
Identities = 266/402 (66%), Positives = 317/402 (78%), Gaps = 7/402 (1%)
Frame = +1
Query: 319 GTRGVFYSREPYANIDAVHVTRFIGLAPVGNADKQKFIHALSPTPAATMAATEISMKPTN 498
GT+GVF++REPY+N+DAVHVTRF+GLA VGN +KQKFIHA+SP P++TM+A EISMKP N
Sbjct: 205 GTKGVFFAREPYSNVDAVHVTRFLGLASVGNKEKQKFIHAISPIPSSTMSAVEISMKPPN 264
Query: 499 TTCSPYASL---NNTSHEGKRSSEDISDSQYWRYDVSKKRQKHGDGD--RLCFKFVSSGS 663
TT SPY + S KRSS +S+SQYWRY+VS+KRQK+G D +LCFKF SSGS
Sbjct: 265 TTLSPYTLTERKSEASDSAKRSSNSVSESQYWRYEVSQKRQKYGTSDTNKLCFKFTSSGS 324
Query: 664 CQHGEQCHFRHDVEAREQSLRGVCFDFMNKGKCERGPDCNFKHSLQEEGGNGSIRRPKGN 843
C GE+C+F HD++AREQS RGVCFDF+NKGKCERGPDCNFKHS Q E + S +R GN
Sbjct: 325 CPRGEKCNFHHDMDAREQSQRGVCFDFLNKGKCERGPDCNFKHSFQNEFDSHSGKRRSGN 384
Query: 844 --TDRSKECWFCLSSPNVESHLITSIGEHCYCALAKGPLVPDHVLILPVEHLPNTLSSPE 1017
T+RSKECWFCLSSPN+ESHLI S+GE YCALAKGPLVPDH+L++PVEH PNTLS
Sbjct: 385 AGTNRSKECWFCLSSPNIESHLIVSVGESFYCALAKGPLVPDHILVIPVEHFPNTLSLGP 444
Query: 1018 ECEIDIVKFQNSLRSYFKEQAMEVVFFEWIYIRGTHANLQAIPIPSSRAVSLHVVFNLAA 1197
+ E +I + QN LR YFK Q EVVFFEW+ R THANLQA+PIPSSRA + +F++AA
Sbjct: 445 DYETEINRLQNCLRKYFKSQGKEVVFFEWVSKRSTHANLQAVPIPSSRAHVVQNIFDMAA 504
Query: 1198 ERMGFKFQIFKNDTSSEGRNILRKQFNRNCSLFYVELPGGTILSHAVEEGEKFPAQFGRE 1377
E++GFKF I K+D SEGR LR QF+ + S FY ELP LSH +EE E FPAQFGRE
Sbjct: 505 EKLGFKFVISKSDAPSEGRKSLRTQFDSDHSFFYAELPECVTLSHVIEENEIFPAQFGRE 564
Query: 1378 VLAGLLNMADRADWRNCKLSKDEEIKMAENFKNSFEKYDPNQ 1503
VLAGLLNMAD+ADWRNC SK+EE KMAE+FK FE +DPN+
Sbjct: 565 VLAGLLNMADKADWRNCAHSKEEETKMAEDFKIRFENFDPNK 606
Score = 116 bits (290), Expect(2) = 0.0
Identities = 52/82 (63%), Positives = 69/82 (84%)
Frame = +2
Query: 41 SIELSSGKQSASGQPYGTYSQDDVDALRALAEEPGIIDIFLTNDWPSGILNGVLTTDIPP 220
S+ SG+ S+ G P+GTY+QDDVDALRA+AEEPG++D+FL+N+WP+ + N V T+DIPP
Sbjct: 119 SVAYLSGRCSSDGLPFGTYTQDDVDALRAIAEEPGVVDLFLSNEWPTEVTNRVPTSDIPP 178
Query: 221 EIPDLSGTDSTISELVAEIKPR 286
+ DLSG+D+TISELV EIKPR
Sbjct: 179 GVSDLSGSDATISELVVEIKPR 200
>ref|XP_002514115.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223546571|gb|EEF48069.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 606
Score = 540 bits (1391), Expect(2) = e-180
Identities = 258/400 (64%), Positives = 315/400 (78%), Gaps = 7/400 (1%)
Frame = +1
Query: 319 GTRGVFYSREPYANIDAVHVTRFIGLAPVGNADKQKFIHALSPTPAATMAATEISMKPTN 498
GT+GVF++REPY+N DAVHVTRF+GLA VGN DKQKFIHA+SPTP +TM + EISMKP+N
Sbjct: 205 GTKGVFFAREPYSNSDAVHVTRFLGLASVGNKDKQKFIHAISPTPGSTMTSAEISMKPSN 264
Query: 499 TTCSPYASLNNTS--HEG-KRSSEDISDSQYWRYDVSKKRQKHG-DGDRLCFKFVSSGSC 666
TT SPY + + EG KR S+ +SDSQYWRYDVS+KR + G DGD+LCFKFV SGSC
Sbjct: 265 TTLSPYTFIEQAAAPKEGTKRPSDSMSDSQYWRYDVSQKRHRTGADGDKLCFKFVFSGSC 324
Query: 667 QHGEQCHFRHDVEAREQSLRGVCFDFMNKGKCERGPDCNFKHSLQEEGGNGSIRR---PK 837
E+CHF HD++AREQ RGVC DF+ KGKCERGPDCNFKH+L EG + S RR
Sbjct: 325 PREEKCHFLHDMDAREQYSRGVCIDFLVKGKCERGPDCNFKHNLLSEGESYSHRRRGFEN 384
Query: 838 GNTDRSKECWFCLSSPNVESHLITSIGEHCYCALAKGPLVPDHVLILPVEHLPNTLSSPE 1017
NT+RSKECWFCLSSP VESHLI SIGE+ YCALAKGPLV DH+L++P+EH PNTLS P+
Sbjct: 385 ANTNRSKECWFCLSSPGVESHLIISIGENYYCALAKGPLVQDHILLVPIEHSPNTLSLPQ 444
Query: 1018 ECEIDIVKFQNSLRSYFKEQAMEVVFFEWIYIRGTHANLQAIPIPSSRAVSLHVVFNLAA 1197
ECE ++V+ + SL+ Y+ +Q E + FEW RGTHANLQA+P+PSSRA ++ +FN+AA
Sbjct: 445 ECESELVRLRKSLKLYYNKQGKETILFEWASKRGTHANLQAVPVPSSRAAAVQDIFNMAA 504
Query: 1198 ERMGFKFQIFKNDTSSEGRNILRKQFNRNCSLFYVELPGGTILSHAVEEGEKFPAQFGRE 1377
E++GFKF K + +S+GR LR QF+RN S FYVELP GT+LSH+V+E E FPAQFGRE
Sbjct: 505 EKLGFKFVTMKFNNNSDGRKWLRTQFDRNYSFFYVELPDGTVLSHSVKENESFPAQFGRE 564
Query: 1378 VLAGLLNMADRADWRNCKLSKDEEIKMAENFKNSFEKYDP 1497
VLAGLLNM +RADWR C LSK+EE KM + K FE+ +P
Sbjct: 565 VLAGLLNMPERADWRTCTLSKEEETKMIDELKKQFEELNP 604
Score = 119 bits (297), Expect(2) = e-180
Identities = 56/82 (68%), Positives = 66/82 (80%)
Frame = +2
Query: 41 SIELSSGKQSASGQPYGTYSQDDVDALRALAEEPGIIDIFLTNDWPSGILNGVLTTDIPP 220
SI SG+QSA GQ YGTYSQDD DALRA+AEEPG++D+FLTN+WPSG+ N +DIP
Sbjct: 119 SIAYLSGRQSADGQQYGTYSQDDADALRAMAEEPGVVDLFLTNEWPSGVTNRASISDIPT 178
Query: 221 EIPDLSGTDSTISELVAEIKPR 286
I D G+DST+SELVAEIKPR
Sbjct: 179 GISDSVGSDSTVSELVAEIKPR 200
>emb|CBI27906.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 567 bits (1461), Expect(2) = e-175
Identities = 273/403 (67%), Positives = 322/403 (79%), Gaps = 8/403 (1%)
Frame = +1
Query: 319 GTRGVFYSREPYANIDAVHVTRFIGLAPVGNADKQKFIHALSPTPAATMAATEISMKPTN 498
GT+G+FY REPY+N+DAVHVTRF+GLAPVGN DKQKFIHA+SP PA+TM++ EISMKP N
Sbjct: 191 GTKGIFYDREPYSNLDAVHVTRFLGLAPVGNKDKQKFIHAISPIPASTMSSAEISMKPPN 250
Query: 499 TTCSPYASLNNTSHEG---KRSSEDISDSQYWRYDVSKKRQKHG--DGDRLCFKFVSSGS 663
TT PY + T+ KR S+ ISD+QYWRYDVS+KRQKHG DGD+LCFKFVSSGS
Sbjct: 251 TTLFPYKIIEETAPTNQATKRPSDSISDTQYWRYDVSQKRQKHGAGDGDKLCFKFVSSGS 310
Query: 664 CQHGEQCHFRHDVEAREQSLRGVCFDFMNKGKCERGPDCNFKHSLQEEGGNGSIRRP--- 834
C G +C+F HD EAREQ +RGVCFDF+NKGKCERGPDCNFKHSLQ+E + RR
Sbjct: 311 CPRGNKCNFLHDTEAREQYMRGVCFDFINKGKCERGPDCNFKHSLQDEDEGFASRRSGSE 370
Query: 835 KGNTDRSKECWFCLSSPNVESHLITSIGEHCYCALAKGPLVPDHVLILPVEHLPNTLSSP 1014
+ RSK CWFCLSSP+VESHLI SIGE YCALAKGPLV D VL++PVEH NTLS P
Sbjct: 371 NAKSSRSKRCWFCLSSPDVESHLIISIGESYYCALAKGPLVEDQVLVIPVEHSANTLSLP 430
Query: 1015 EECEIDIVKFQNSLRSYFKEQAMEVVFFEWIYIRGTHANLQAIPIPSSRAVSLHVVFNLA 1194
ECEI++ +FQ SL+ YF+ Q EVVFFEWI+ RGTHAN+QA+PIP SRA ++ +F LA
Sbjct: 431 PECEIELDRFQKSLKMYFRTQGKEVVFFEWIFKRGTHANIQAVPIPLSRASAVKNIFILA 490
Query: 1195 AERMGFKFQIFKNDTSSEGRNILRKQFNRNCSLFYVELPGGTILSHAVEEGEKFPAQFGR 1374
AE++GF+F K++ SEGR LR QF+ S FYVELP GTILSHA+E+ EKFP QFGR
Sbjct: 491 AEKLGFQFVTTKSNNDSEGRKSLRAQFDDKISFFYVELPDGTILSHAIEDNEKFPVQFGR 550
Query: 1375 EVLAGLLNMADRADWRNCKLSKDEEIKMAENFKNSFEKYDPNQ 1503
EVLAGLLNMADRADWRNCK SK++E+KMAE FKN F+K+DP Q
Sbjct: 551 EVLAGLLNMADRADWRNCKQSKEDEMKMAEVFKNQFKKFDPYQ 593
Score = 77.4 bits (189), Expect(2) = e-175
Identities = 42/82 (51%), Positives = 52/82 (63%)
Frame = +2
Query: 41 SIELSSGKQSASGQPYGTYSQDDVDALRALAEEPGIIDIFLTNDWPSGILNGVLTTDIPP 220
S+ SG++S GQ +G YSQDDVDALRALA++ G+ G +T++IPP
Sbjct: 119 SVVYISGRRSLDGQQFGKYSQDDVDALRALADD--------------GVTKGAVTSNIPP 164
Query: 221 EIPDLSGTDSTISELVAEIKPR 286
I D SG DS ISELV EIKPR
Sbjct: 165 GISDSSGCDSAISELVGEIKPR 186