BLASTX nr result

ID: Cnidium21_contig00015201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015201
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241009.1| uncharacterized protein LOC100812176 [Glycin...   174   7e-42
ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitoch...   171   4e-41
ref|NP_001238505.1| uncharacterized protein LOC100500208 [Glycin...   171   7e-41
ref|XP_004138121.1| PREDICTED: 39S ribosomal protein L47, mitoch...   167   1e-39
ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|1...   164   5e-39

>ref|NP_001241009.1| uncharacterized protein LOC100812176 [Glycine max]
           gi|255640572|gb|ACU20571.1| unknown [Glycine max]
          Length = 143

 Score =  174 bits (441), Expect = 7e-42
 Identities = 80/86 (93%), Positives = 83/86 (96%)
 Frame = +3

Query: 45  RMGHNPLEEFFETDRSPDEDKPVVYGRSWKASELRLKSWDDLHKLWYVLLKEKNMLMTQR 224
           R GHNPL+EFFE DRSPD+DKPVVYGRSWKASELRLKSWDDLHKLWYVLLKEKNMLMTQR
Sbjct: 31  REGHNPLQEFFEADRSPDDDKPVVYGRSWKASELRLKSWDDLHKLWYVLLKEKNMLMTQR 90

Query: 225 QMLNSQNLRFPNPERIPKARKSMCRI 302
           QMLN+QNLRFPNPERIPK RKSMCRI
Sbjct: 91  QMLNAQNLRFPNPERIPKVRKSMCRI 116


>ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitochondrial isoform 1
           [Vitis vinifera] gi|225457112|ref|XP_002283459.1|
           PREDICTED: 39S ribosomal protein L47, mitochondrial
           isoform 2 [Vitis vinifera] gi|297733826|emb|CBI15073.3|
           unnamed protein product [Vitis vinifera]
          Length = 140

 Score =  171 bits (434), Expect = 4e-41
 Identities = 79/86 (91%), Positives = 81/86 (94%)
 Frame = +3

Query: 45  RMGHNPLEEFFETDRSPDEDKPVVYGRSWKASELRLKSWDDLHKLWYVLLKEKNMLMTQR 224
           R G+NPLEEFFE DRSPDEDKPVVYGR WKASELRLKSWDDLHKLWY+LLKEKNMLMTQR
Sbjct: 28  RAGYNPLEEFFEADRSPDEDKPVVYGRGWKASELRLKSWDDLHKLWYILLKEKNMLMTQR 87

Query: 225 QMLNSQNLRFPNPERIPKARKSMCRI 302
           QML SQNLRFPNPERIPK RKSMCRI
Sbjct: 88  QMLQSQNLRFPNPERIPKVRKSMCRI 113


>ref|NP_001238505.1| uncharacterized protein LOC100500208 [Glycine max]
           gi|255629706|gb|ACU15202.1| unknown [Glycine max]
          Length = 142

 Score =  171 bits (432), Expect = 7e-41
 Identities = 78/86 (90%), Positives = 82/86 (95%)
 Frame = +3

Query: 45  RMGHNPLEEFFETDRSPDEDKPVVYGRSWKASELRLKSWDDLHKLWYVLLKEKNMLMTQR 224
           R GHNPL+EFFE DRSP++DKPVVYGRSWKA ELRLKSWDDLHKLWYVLLKEKNMLMTQR
Sbjct: 30  REGHNPLQEFFEADRSPEDDKPVVYGRSWKACELRLKSWDDLHKLWYVLLKEKNMLMTQR 89

Query: 225 QMLNSQNLRFPNPERIPKARKSMCRI 302
           QMLN+QNLRFPNPERIPK RKSMCRI
Sbjct: 90  QMLNAQNLRFPNPERIPKVRKSMCRI 115


>ref|XP_004138121.1| PREDICTED: 39S ribosomal protein L47, mitochondrial-like [Cucumis
           sativus] gi|449528917|ref|XP_004171448.1| PREDICTED: 39S
           ribosomal protein L47, mitochondrial-like [Cucumis
           sativus]
          Length = 143

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/86 (89%), Positives = 82/86 (95%)
 Frame = +3

Query: 45  RMGHNPLEEFFETDRSPDEDKPVVYGRSWKASELRLKSWDDLHKLWYVLLKEKNMLMTQR 224
           R G+NPLEEFFE DRSPD+ KPVVYGRSWKASELRLKSWDDL+KLWYVLLKEKNMLMTQR
Sbjct: 31  RTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQR 90

Query: 225 QMLNSQNLRFPNPERIPKARKSMCRI 302
           QMLN+QNL+FPNPERIPK RKSMCRI
Sbjct: 91  QMLNAQNLKFPNPERIPKVRKSMCRI 116


>ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|118483659|gb|ABK93723.1|
           unknown [Populus trichocarpa]
           gi|222861024|gb|EEE98566.1| predicted protein [Populus
           trichocarpa]
          Length = 142

 Score =  164 bits (416), Expect = 5e-39
 Identities = 75/84 (89%), Positives = 79/84 (94%)
 Frame = +3

Query: 51  GHNPLEEFFETDRSPDEDKPVVYGRSWKASELRLKSWDDLHKLWYVLLKEKNMLMTQRQM 230
           GHNPLEEFFE DRS DEDKP+VYGRSWKASELRLKSWDDL KLWYVLLKEKNMLMTQRQM
Sbjct: 32  GHNPLEEFFEADRSQDEDKPIVYGRSWKASELRLKSWDDLQKLWYVLLKEKNMLMTQRQM 91

Query: 231 LNSQNLRFPNPERIPKARKSMCRI 302
           L++QN RFPNPER+PK RKSMCRI
Sbjct: 92  LHAQNFRFPNPERLPKVRKSMCRI 115


Top