BLASTX nr result

ID: Cnidium21_contig00015168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015168
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   157   7e-37
ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   157   7e-37
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   157   7e-37
gb|AAT85173.1| hypothetical protein [Oryza sativa Japonica Group]     157   7e-37
gb|EEC77075.1| hypothetical protein OsI_15473 [Oryza sativa Indi...   157   9e-37

>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1558

 Score =  157 bits (398), Expect = 7e-37
 Identities = 73/116 (62%), Positives = 100/116 (86%)
 Frame = -2

Query: 348  KTFLWKTIIATLRAEEKVVLAVASSGIASLLIEGGRTAHSRFKIPLQIFENSSCGIKKNT 169
            KTFL++TIIA LR+E+K+VLAVASSGIASLL+ GGRTAHSRFKIPL+I+E+S+C I +NT
Sbjct: 973  KTFLYRTIIAKLRSEKKIVLAVASSGIASLLLPGGRTAHSRFKIPLEIYEDSTCSINQNT 1032

Query: 168  FLAELILHTNLVVWDEAPMNHRHIFEAVDRSFRDIMQSEDPNNLQKPFGGKTVILG 1
             LA+L++ T+L++WDEAPM  R+ FEA+DR+ +DI+  + P+  ++PFGG TV+LG
Sbjct: 1033 HLADLMVQTDLIIWDEAPMTQRYAFEALDRTLKDIIGFKFPDRAEQPFGGMTVLLG 1088


>ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355510129|gb|AES91271.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1531

 Score =  157 bits (398), Expect = 7e-37
 Identities = 73/116 (62%), Positives = 100/116 (86%)
 Frame = -2

Query: 348  KTFLWKTIIATLRAEEKVVLAVASSGIASLLIEGGRTAHSRFKIPLQIFENSSCGIKKNT 169
            KTFL++TIIA LR+E+K+VLAVASSGIASLL+ GGRTAHSRFKIPL+I+E+S+C I +NT
Sbjct: 946  KTFLYRTIIAKLRSEKKIVLAVASSGIASLLLPGGRTAHSRFKIPLEIYEDSTCSINQNT 1005

Query: 168  FLAELILHTNLVVWDEAPMNHRHIFEAVDRSFRDIMQSEDPNNLQKPFGGKTVILG 1
             LA+L++ T+L++WDEAPM  R+ FEA+DR+ +DI+  + P+  ++PFGG TV+LG
Sbjct: 1006 HLADLMVQTDLIIWDEAPMTQRYAFEALDRTLKDIIGFKFPDRAEQPFGGMTVLLG 1061


>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1558

 Score =  157 bits (398), Expect = 7e-37
 Identities = 73/116 (62%), Positives = 100/116 (86%)
 Frame = -2

Query: 348  KTFLWKTIIATLRAEEKVVLAVASSGIASLLIEGGRTAHSRFKIPLQIFENSSCGIKKNT 169
            KTFL++TIIA LR+E+K+VLAVASSGIASLL+ GGRTAHSRFKIPL+I+E+S+C I +NT
Sbjct: 973  KTFLYRTIIAKLRSEKKIVLAVASSGIASLLLPGGRTAHSRFKIPLEIYEDSTCSINQNT 1032

Query: 168  FLAELILHTNLVVWDEAPMNHRHIFEAVDRSFRDIMQSEDPNNLQKPFGGKTVILG 1
             LA+L++ T+L++WDEAPM  R+ FEA+DR+ +DI+  + P+  ++PFGG TV+LG
Sbjct: 1033 HLADLMVQTDLIIWDEAPMTQRYAFEALDRTLKDIIGFKFPDRAEQPFGGMTVLLG 1088


>gb|AAT85173.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 807

 Score =  157 bits (398), Expect = 7e-37
 Identities = 73/116 (62%), Positives = 95/116 (81%)
 Frame = -2

Query: 348 KTFLWKTIIATLRAEEKVVLAVASSGIASLLIEGGRTAHSRFKIPLQIFENSSCGIKKNT 169
           KTFLW T++ ++R++ K+ L VASSGIASLL+ GGRT HSRFKIPL+I +NS C IKKNT
Sbjct: 349 KTFLWTTLLNSIRSQGKIALVVASSGIASLLLPGGRTPHSRFKIPLEISQNSMCSIKKNT 408

Query: 168 FLAELILHTNLVVWDEAPMNHRHIFEAVDRSFRDIMQSEDPNNLQKPFGGKTVILG 1
            LAELI  T+L+VWDEAP+NH++ FE++DR+ RDI+   +PN+L K FGG TV+LG
Sbjct: 409 NLAELIQKTSLIVWDEAPVNHKYCFESLDRTLRDILSETNPNSLDKQFGGITVVLG 464


>gb|EEC77075.1| hypothetical protein OsI_15473 [Oryza sativa Indica Group]
          Length = 943

 Score =  157 bits (397), Expect = 9e-37
 Identities = 74/116 (63%), Positives = 92/116 (79%)
 Frame = -2

Query: 348 KTFLWKTIIATLRAEEKVVLAVASSGIASLLIEGGRTAHSRFKIPLQIFENSSCGIKKNT 169
           KTFLW  ++  +RA+ K+ LAVASSGIA+LL+ GGRT HSRF+IPL I E+S C IKKNT
Sbjct: 490 KTFLWNALLNAVRAQGKIALAVASSGIAALLLPGGRTPHSRFRIPLDIQEHSLCAIKKNT 549

Query: 168 FLAELILHTNLVVWDEAPMNHRHIFEAVDRSFRDIMQSEDPNNLQKPFGGKTVILG 1
            LA+LI  T+LV+WDEAP+NHRH FEA+DR+ RDI+ S DP+ L K FGG TV+ G
Sbjct: 550 HLAQLIQQTSLVIWDEAPVNHRHCFEALDRTLRDILSSNDPSLLDKQFGGLTVVFG 605


Top