BLASTX nr result

ID: Cnidium21_contig00015139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015139
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus ...   100   4e-19
ref|NP_001046620.1| Os02g0301000 [Oryza sativa Japonica Group] g...    98   2e-18
gb|EEE56788.1| hypothetical protein OsJ_06369 [Oryza sativa Japo...    98   2e-18
dbj|BAK02301.1| predicted protein [Hordeum vulgare subsp. vulgar...    97   4e-18
ref|XP_002892071.1| zinc finger family protein [Arabidopsis lyra...    97   4e-18

>ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus communis]
           gi|223538607|gb|EEF40210.1| RING finger protein 113A,
           putative [Ricinus communis]
          Length = 325

 Score =  100 bits (250), Expect = 4e-19
 Identities = 51/120 (42%), Positives = 70/120 (58%), Gaps = 9/120 (7%)
 Frame = +1

Query: 193 DYYKFVEDVEQVKGHWLMIEELQE--RIRIKNL-------GPKLQLEYDEEDEAQLPSEC 345
           D  KF+ D    K  W + +E  E  +IR +NL       G     E D++DE +LP  C
Sbjct: 206 DSCKFMHDRGDYKSGWQLEKEWDEAEKIRKRNLALGELEGGTGENEEEDDDDEHELPFAC 265

Query: 346 VICMEPFVLPVVTMCRHYFCRPCAVQHNYKDDGCFVCAKPTLGILRNAHKLRERITADQK 525
            IC +PFV PV T C+HYFC  CA++H+ K+  CFVC +PTLGI   AH++R+ +  D K
Sbjct: 266 FICRQPFVDPVTTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNTAHEIRKMMAEDHK 325


>ref|NP_001046620.1| Os02g0301000 [Oryza sativa Japonica Group]
           gi|75324014|sp|Q6K4V3.1|C3H15_ORYSJ RecName: Full=Zinc
           finger CCCH domain-containing protein 15; Short=OsC3H15
           gi|48716667|dbj|BAD23334.1| putative zinc finger protein
           [Oryza sativa Japonica Group]
           gi|113536151|dbj|BAF08534.1| Os02g0301000 [Oryza sativa
           Japonica Group]
          Length = 326

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 51/120 (42%), Positives = 70/120 (58%), Gaps = 9/120 (7%)
 Frame = +1

Query: 193 DYYKFVEDVEQVKGHWLMIEELQE-------RIRIKNLGPKLQL--EYDEEDEAQLPSEC 345
           D  KF+ D    K  W + +E +E       RI +   G   +   E D++DE  LP  C
Sbjct: 206 DSCKFMHDRGDYKSGWQIEKEWEEAEKARKRRIAMGGDGSDYEAGEEDDDDDEEALPFAC 265

Query: 346 VICMEPFVLPVVTMCRHYFCRPCAVQHNYKDDGCFVCAKPTLGILRNAHKLRERITADQK 525
            IC EPFV PVVT C+HYFC  CA++H+ K+  CFVC KPTLGI   A ++R+++  D+K
Sbjct: 266 YICREPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNKPTLGIFNAAQEIRKKMAQDKK 325


>gb|EEE56788.1| hypothetical protein OsJ_06369 [Oryza sativa Japonica Group]
          Length = 327

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 51/120 (42%), Positives = 70/120 (58%), Gaps = 9/120 (7%)
 Frame = +1

Query: 193 DYYKFVEDVEQVKGHWLMIEELQE-------RIRIKNLGPKLQL--EYDEEDEAQLPSEC 345
           D  KF+ D    K  W + +E +E       RI +   G   +   E D++DE  LP  C
Sbjct: 207 DSCKFMHDRGDYKSGWQIEKEWEEAEKARKRRIAMGGDGSDYEAGEEDDDDDEEALPFAC 266

Query: 346 VICMEPFVLPVVTMCRHYFCRPCAVQHNYKDDGCFVCAKPTLGILRNAHKLRERITADQK 525
            IC EPFV PVVT C+HYFC  CA++H+ K+  CFVC KPTLGI   A ++R+++  D+K
Sbjct: 267 YICREPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNKPTLGIFNAAQEIRKKMAQDKK 326


>dbj|BAK02301.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326518891|dbj|BAJ92606.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 326

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 52/120 (43%), Positives = 67/120 (55%), Gaps = 9/120 (7%)
 Frame = +1

Query: 193 DYYKFVEDVEQVKGHWLMIEELQE-------RIRIKNLGPK--LQLEYDEEDEAQLPSEC 345
           D  KF+ D    K  W +  E  E       RI ++ L        E D +DE  LP  C
Sbjct: 203 DSCKFMHDRGDYKSGWQLEREWDEAEKARKRRIAMRELDGSDGEAEEEDSDDEEALPFAC 262

Query: 346 VICMEPFVLPVVTMCRHYFCRPCAVQHNYKDDGCFVCAKPTLGILRNAHKLRERITADQK 525
            IC EPFV PVVT C+HYFC  CA++H+ K+  CFVC KPTLGI   A ++R++I  D+K
Sbjct: 263 FICREPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNKPTLGIFNAAQEIRKKIAQDKK 322


>ref|XP_002892071.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337913|gb|EFH68330.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 49/118 (41%), Positives = 72/118 (61%), Gaps = 8/118 (6%)
 Frame = +1

Query: 193 DYYKFVEDVEQVKGHWLMIEELQE--RIRIKNLGPKLQLEYDE------EDEAQLPSECV 348
           D  KF+ D    K  W + +E +E  ++R +N    ++ E DE      EDE  LP  C 
Sbjct: 218 DSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVEDEDDEADNDSDEDENALPFACF 277

Query: 349 ICMEPFVLPVVTMCRHYFCRPCAVQHNYKDDGCFVCAKPTLGILRNAHKLRERITADQ 522
           IC EPFV PVVT C+HYFC  CA++H+ K+  CFVC +PT+GI   AH++++R+  ++
Sbjct: 278 ICREPFVDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPTMGIFNAAHEIKKRMAEER 335


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