BLASTX nr result

ID: Cnidium21_contig00015123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015123
         (1817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...   322   2e-85
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   284   6e-74
emb|CBI16834.3| unnamed protein product [Vitis vinifera]              264   7e-68
ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|2...   256   1e-65
ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|2...   231   6e-58

>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
           vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
           uncharacterized protein LOC100268141 isoform 2 [Vitis
           vinifera]
          Length = 647

 Score =  322 bits (825), Expect = 2e-85
 Identities = 172/313 (54%), Positives = 201/313 (64%), Gaps = 7/313 (2%)
 Frame = +1

Query: 1   GGGAISALAEDEMIGEDDEYDDLYNDVNVGEGFLQLQRSEVPGSSVGVMNRPFHTQKTTA 180
           GGGAISALA+DE++GEDDEYDDLYNDVNVGEGFLQ+ RSE P  S  +   PF   KT  
Sbjct: 23  GGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHRSEAPAPSGVMAGGPFQAHKTDV 82

Query: 181 PEPTTEKFVTNELNIHGVPTDGKFLNAGFPQAKERLTAEVGPDSGVMNVLG------KTS 342
           P    E   +  L I GV  +GK+ N  F + KE   A  GP+ G  + L       K  
Sbjct: 83  PPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPMAVKGPEMGSTSHLDGPSVSQKGR 142

Query: 343 GLSMTHDTQALNSGFRGPASMAQKNGVDSANVSSKVANEF-PLLNPNTGAQRGVSQIPSS 519
            L MTHDTQ  N GF+G   + QK G + ++V  K+ANE  P+LN  TG  R V Q+ S+
Sbjct: 143 VLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIANESTPVLNSGTGGPRAVPQMLSN 202

Query: 520 QXXXXXXXXXXXXXXXLIRPPADNGATMLYVGELHWWTTDVDIERAASYYGRVKEIKFFD 699
           Q                IRP  DNGATML+VGELHWWTTD ++E   S YGRVKEIKFFD
Sbjct: 203 QMGMNVNVNRPMVNENQIRPAVDNGATMLFVGELHWWTTDAELESVLSQYGRVKEIKFFD 262

Query: 700 ERASGKSKGYCQVEFYDSAAAAACKEGMDGHIFNGRACVVAFASPQAMRQMSNKSNVXXX 879
           ERASGKSKGYCQVEFYD++AAAACKEGM+G+IFNGRACVVAFASPQ ++QM         
Sbjct: 263 ERASGKSKGYCQVEFYDASAAAACKEGMNGYIFNGRACVVAFASPQTLKQMGASYMNKTQ 322

Query: 880 XXXXXXGRRPMND 918
                 GRRPMND
Sbjct: 323 AQSQSQGRRPMND 335



 Score =  105 bits (261), Expect = 5e-20
 Identities = 64/177 (36%), Positives = 78/177 (44%), Gaps = 1/177 (0%)
 Frame = +1

Query: 1285 VNAMGIAGVSPHVNPAFFGRXXXXXXXXXXXXXXXDGPHSXXXXXXXXXXXXXEEHGQRT 1464
            VN MG+AGV+PHVNPAFFGR               DG H+             EEHG+RT
Sbjct: 459  VNTMGLAGVAPHVNPAFFGRGMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRT 518

Query: 1465 RXXXXXXXXXXXXXXXXXQGNDKGARSNAASREKERGSERDWSGNSXXXXXXXXXXXXXX 1644
            R                   ++K  RSN ASREKERGSERDWSGNS              
Sbjct: 519  RESSYGGDDGASDYGYGEVNHEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWER 578

Query: 1645 XXXXXXXXXXXXXXXXXXQKDRE-SYKDDGDRGQAXXXXXXXXXVAPEDDHRSRSRD 1812
                              Q++R+ + +DD DRGQ+            ++DHRSRSRD
Sbjct: 579  SDKDHRYREEKDGYRDHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRD 635


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
           gi|223546091|gb|EEF47594.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 644

 Score =  284 bits (726), Expect = 6e-74
 Identities = 159/315 (50%), Positives = 199/315 (63%), Gaps = 9/315 (2%)
 Frame = +1

Query: 1   GGGAISALAEDEMIGEDDEYDDLYNDVNVGEGFLQLQRSEVPGSSVGVMNRPFHTQKTTA 180
           G GAI ALAE+EM GEDDEYDDLYNDVN+GE FLQ+ RSE P +   V N  F  Q   +
Sbjct: 23  GSGAIPALAEEEM-GEDDEYDDLYNDVNIGENFLQMHRSEAPPAPPSVGNGGF--QPRNS 79

Query: 181 PEPTTEKFVTNELNIHGVPTDGKF-LNAGFPQAKERLTAEVGPDSGVM------NVLGKT 339
            +   E   +  LNI GV  + K+     FP+   +     GP+ G +      ++  KT
Sbjct: 80  NDLRVESGGSQGLNIPGVAVESKYSTGTHFPEQNVK-----GPEIGSVGYPDGSSIAQKT 134

Query: 340 SGLSMTHDTQALNSGFRGPASMAQKNGVDSANVSSKVANEFPLLNPNTGAQRGVSQIPSS 519
             + MT+D+QA N GF+G  S     GVD +++++K++N+ P   PN G  R + Q+P+S
Sbjct: 135 RVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISND-PTPVPNAGVPRVIPQLPAS 193

Query: 520 QXXXXXXXXXXXXXXXLIRPPADNGATMLYVGELHWWTTDVDIERAASYYGRVKEIKFFD 699
           Q                IRPP +NG+TMLYVGELHWWTTD ++E   S YG VKEIKFFD
Sbjct: 194 QMNMNMDTNRSATNENQIRPPLENGSTMLYVGELHWWTTDAELENVLSQYGMVKEIKFFD 253

Query: 700 ERASGKSKGYCQVEFYDSAAAAACKEGMDGHIFNGRACVVAFASPQAMRQM--SNKSNVX 873
           ERASGKSKGYCQVEFYD+AAAAACKEGM+GH+FNGRACVVAFAS Q ++QM  S  +   
Sbjct: 254 ERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFNGRACVVAFASQQTLKQMGASYMNKNQ 313

Query: 874 XXXXXXXXGRRPMND 918
                   GRRPMND
Sbjct: 314 GQPQSQNQGRRPMND 328



 Score =  104 bits (259), Expect = 9e-20
 Identities = 69/181 (38%), Positives = 84/181 (46%), Gaps = 4/181 (2%)
 Frame = +1

Query: 1285 VNAMGIAGVSPHVNPAFFGRXXXXXXXXXXXXXXXDGPHSXXXXXXXXXXXXXEEHGQRT 1464
            VNAMG+AGV+PHVNPAFFGR               DGP++             EE G+RT
Sbjct: 454  VNAMGLAGVAPHVNPAFFGRGMAPNGMGMMGPSGMDGPNAGMWSDTSMGGWG-EEPGRRT 512

Query: 1465 RXXXXXXXXXXXXXXXXXQGNDKGARSNAASREKERGSERDWSGNS---XXXXXXXXXXX 1635
            R                   ++KGARS+AASREKER SERDWSGNS              
Sbjct: 513  RESSYGGDDGASEYGYGEVNHEKGARSSAASREKERASERDWSGNSDRRHRDDREHDWDR 572

Query: 1636 XXXXXXXXXXXXXXXXXXXXXQKDRES-YKDDGDRGQAXXXXXXXXXVAPEDDHRSRSRD 1812
                                 Q++R+S Y+DD DRGQ+           PE+D+RSRSRD
Sbjct: 573  SEREHKEHRYREEKESYRDHRQRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRD 632

Query: 1813 A 1815
            A
Sbjct: 633  A 633


>emb|CBI16834.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  264 bits (674), Expect = 7e-68
 Identities = 145/270 (53%), Positives = 171/270 (63%), Gaps = 9/270 (3%)
 Frame = +1

Query: 1   GGGAISALAEDEMIGEDDEYDDLYNDVNVGEGFLQLQRSEVPGSSVGVMNRPFHTQKTTA 180
           GGGAISALA+DE++GEDDEYDDLYNDVNVGEGFLQ+ RSE P  S  +   PF   KT  
Sbjct: 5   GGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHRSEAPAPSGVMAGGPFQAHKTDV 64

Query: 181 PEPTTEKFVTNELNIHGVPTDGKFLNAGFPQAKERLTAEVGPDSGVMNVLG------KTS 342
           P    E   +  L I GV  +GK+ N  F + KE   A  GP+ G  + L       K  
Sbjct: 65  PPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPMAVKGPEMGSTSHLDGPSVSQKGR 124

Query: 343 GLSMTHDTQALNSGFRGPASMAQKNGVDSANVSSKVANEF-PLLNPNTGAQRGVSQIPSS 519
            L MTHDTQ  N GF+G   + QK G + ++V  K+ANE  P+LN  TG  R V Q+ S+
Sbjct: 125 VLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIANESTPVLNSGTGGPRAVPQMLSN 184

Query: 520 QXXXXXXXXXXXXXXXLIRPPADNGATMLYVGELHWWTTDVDIERAASYYGRVKEIKFFD 699
           Q                IRP  DNGATML+VGELHWWTTD ++E   S YGRVKEIKFFD
Sbjct: 185 QMGMNVNVNRPMVNENQIRPAVDNGATMLFVGELHWWTTDAELESVLSQYGRVKEIKFFD 244

Query: 700 ERASGKSKGYCQVEFYDSAAAAAC--KEGM 783
           ERASGKSKGYCQVEFYD++AAAA   KEG+
Sbjct: 245 ERASGKSKGYCQVEFYDASAAAAFSGKEGI 274



 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 45/106 (42%), Positives = 50/106 (47%)
 Frame = +1

Query: 1285 VNAMGIAGVSPHVNPAFFGRXXXXXXXXXXXXXXXDGPHSXXXXXXXXXXXXXEEHGQRT 1464
            VN MG+AGV+PHVNPAFFGR                                 EEHG+RT
Sbjct: 334  VNTMGLAGVAPHVNPAFFGRGMAANGMGMMG----------------------EEHGRRT 371

Query: 1465 RXXXXXXXXXXXXXXXXXQGNDKGARSNAASREKERGSERDWSGNS 1602
            R                   ++K  RSN ASREKERGSERDWSGNS
Sbjct: 372  RESSYGGDDGASDYGYGEVNHEKVGRSNTASREKERGSERDWSGNS 417


>ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|222852472|gb|EEE90019.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score =  256 bits (654), Expect = 1e-65
 Identities = 151/315 (47%), Positives = 185/315 (58%), Gaps = 9/315 (2%)
 Frame = +1

Query: 1   GGGAISALAEDEMIGEDDEYDDLYNDVNVGEGFLQLQRSEVPGSSVGVMNRPFHTQKTTA 180
           G GAI ALAE+EM GEDDEYDDLYNDVNVGE FLQ+  SE P     V N  F T+    
Sbjct: 13  GSGAIPALAEEEM-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATVGNGGFQTRNAHE 71

Query: 181 PEPTTEKFVTNELNIHGVPTDGKFLNAG--FPQAKERLTA----EVGPDSGVMNVLGKTS 342
               T       +   G   +G + NA   FP+ K+   A    +VGP  G  +V  K  
Sbjct: 72  SRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAVEAQDVGPVDG-SSVAQKGR 130

Query: 343 GLSMTHDTQALNSGFRGPASMAQKNGVDSANVSSKVANE-FPLLNPNTGAQRGVSQIPSS 519
            + M+HD Q  N GF+    +    GVD +++S K A E  PL    +   RG  Q+  +
Sbjct: 131 VIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEPLPITGSAGPRGAPQMQVN 190

Query: 520 QXXXXXXXXXXXXXXXLIRPPADNGATMLYVGELHWWTTDVDIERAASYYGRVKEIKFFD 699
           Q                +RPP +NG+T LYVGELHWWTTD ++E  AS +GRVKEIKFFD
Sbjct: 191 QMHMSADVNRPVVNENQVRPPIENGSTTLYVGELHWWTTDAELESFASQFGRVKEIKFFD 250

Query: 700 ERASGKSKGYCQVEFYDSAAAAACKEGMDGHIFNGRACVVAFASPQAMRQM--SNKSNVX 873
           ERASGKSKGYCQV+FY++AAAAACKEGM+GH+FNGR CVVAFASPQ ++QM  S  +   
Sbjct: 251 ERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKTQ 310

Query: 874 XXXXXXXXGRRPMND 918
                   GR  MND
Sbjct: 311 GQPQTQSQGRGSMND 325



 Score = 96.3 bits (238), Expect = 2e-17
 Identities = 63/178 (35%), Positives = 79/178 (44%), Gaps = 2/178 (1%)
 Frame = +1

Query: 1285 VNAMGIAGVSPHVNPAFFGRXXXXXXXXXXXXXXXDGPHSXXXXXXXXXXXXXEEHGQRT 1464
            VN+MG+AGV+PHVNPAFF R               DGP+               E+G   
Sbjct: 449  VNSMGLAGVAPHVNPAFFARGMAPNGMGMMVSSGMDGPNPGMWESSYDGDEGASEYGY-- 506

Query: 1465 RXXXXXXXXXXXXXXXXXQGN-DKGARSNAASREKERGSERDWSGNSXXXXXXXXXXXXX 1641
                              +GN +KGARS+ ASREKERGSERDWSGNS             
Sbjct: 507  -----------------GEGNHEKGARSSGASREKERGSERDWSGNSDRRHRDEREQDWD 549

Query: 1642 XXXXXXXXXXXXXXXXXXXQKDRES-YKDDGDRGQAXXXXXXXXXVAPEDDHRSRSRD 1812
                               Q++R+S Y+DD DRG +          APE+D+RSR+RD
Sbjct: 550  RPEREHRYKEEKDSYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRTRD 607


>ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|222864687|gb|EEF01818.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score =  231 bits (588), Expect = 6e-58
 Identities = 140/310 (45%), Positives = 173/310 (55%), Gaps = 4/310 (1%)
 Frame = +1

Query: 1   GGGAISALAEDEMIGEDDEYDDLYNDVNVGEGFLQLQRSEVPGSSVGVMNRPFHTQKTTA 180
           G GAI ALAE+E+ GEDDEYDDLYNDVNVGE FLQ+  SE P       N  F T+    
Sbjct: 13  GSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATAGNGGFQTRNAHE 71

Query: 181 PEPTTEKFVTNELNIHGVPTDGKFLNAG--FPQAKERLTAEVGPDSGVMNVLGKTSGLSM 354
               T        +  GV  +GK+ NAG  FP+ K+   A +G ++  +  +G   G S+
Sbjct: 72  SRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQ---AGIGVEANDVGSIGYGDGSSV 128

Query: 355 THDTQALNSGFRGPASMAQKNGVDSANVSSKVANEFPLLNPNTGAQRGVSQIPSSQXXXX 534
                    G  GP  + Q   V+  N+++ V    P++N N                  
Sbjct: 129 AQ------KGSAGPRGVPQMQ-VNQMNMNADVNR--PVVNENQ----------------- 162

Query: 535 XXXXXXXXXXXLIRPPADNGATMLYVGELHWWTTDVDIERAASYYGRVKEIKFFDERASG 714
                       +RPP +NG T LYVGELHWWTTD ++E  AS YGRVKEIKFFDERASG
Sbjct: 163 ------------VRPPIENGPTTLYVGELHWWTTDAELESVASQYGRVKEIKFFDERASG 210

Query: 715 KSKGYCQVEFYDSAAAAACKEGMDGHIFNGRACVVAFASPQAMRQM--SNKSNVXXXXXX 888
           KSKGYCQV+FY++AAAAACKEGM+ H+FNGR CVVAFAS Q ++QM  S  S        
Sbjct: 211 KSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQMGASYMSKTQGQPQP 270

Query: 889 XXXGRRPMND 918
              GR  MND
Sbjct: 271 QSQGRGSMND 280



 Score = 88.2 bits (217), Expect = 7e-15
 Identities = 61/178 (34%), Positives = 76/178 (42%), Gaps = 2/178 (1%)
 Frame = +1

Query: 1285 VNAMGIAGVSPHVNPAFFGRXXXXXXXXXXXXXXXDGPHSXXXXXXXXXXXXXEEHGQRT 1464
            VN+MG+AGV+PHVNPAFF R               +GP+              E      
Sbjct: 404  VNSMGLAGVAPHVNPAFFARGMAPNGMGMMASSGMEGPNPGKESSYDGDEGASE------ 457

Query: 1465 RXXXXXXXXXXXXXXXXXQGN-DKGARSNAASREKERGSERDWSGNSXXXXXXXXXXXXX 1641
                              +GN +KGARS+ ASREKER SERDWSGNS             
Sbjct: 458  --------------YGYGEGNHEKGARSSGASREKERVSERDWSGNSDRRHRDEREQDWD 503

Query: 1642 XXXXXXXXXXXXXXXXXXXQKDRES-YKDDGDRGQAXXXXXXXXXVAPEDDHRSRSRD 1812
                               Q++R+S Y+DD DRG +          APE+D+RSRSRD
Sbjct: 504  RSEREPKYREEKDTYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRSRD 561


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