BLASTX nr result

ID: Cnidium21_contig00015106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015106
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526955.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...    94   6e-26
ref|XP_003522671.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...    92   1e-25
ref|XP_003537809.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...    93   1e-25
ref|XP_002278408.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...    91   3e-25
ref|XP_002278452.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...    91   3e-25

>ref|XP_003526955.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Glycine max]
          Length = 1895

 Score = 93.6 bits (231), Expect(2) = 6e-26
 Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
 Frame = +2

Query: 347  ICDQELKLHYTLSFDAKLGKSLLELQALVCRK*YLESTRGQ-VHKVVDIRFYGASVEDLC 523
            +  Q+L LH  LS DA+LGK+L E  ALVCRK Y+ES  G     +V++ F+G  +EDLC
Sbjct: 1627 VLGQDLDLHDILSIDAELGKTLQEFNALVCRKHYIESIGGSYTDTIVNLHFHGVPIEDLC 1686

Query: 524  LDFTLPGYPNYVMKPCDEMV 583
            LDFTLPGYP Y +KP DE+V
Sbjct: 1687 LDFTLPGYPEYTLKPGDEIV 1706



 Score = 50.8 bits (120), Expect(2) = 6e-26
 Identities = 25/36 (69%), Positives = 28/36 (77%)
 Frame = +1

Query: 682  VDINNLEECISLYVDATVRVRIFKQLEAFRVRFNQV 789
            VDINNLEE ISL  DATV+  I +Q+EAFR  FNQV
Sbjct: 1706 VDINNLEEYISLVADATVKTGIMRQIEAFRAGFNQV 1741


>ref|XP_003522671.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Glycine max]
          Length = 1891

 Score = 91.7 bits (226), Expect(2) = 1e-25
 Identities = 45/77 (58%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
 Frame = +2

Query: 356  QELKLHYTLSFDAKLGKSLLELQALVCRK*YLESTRGQ-VHKVVDIRFYGASVEDLCLDF 532
            Q+L LH  L  DA+LGK+L E  ALVCRK Y+ES  G     +V++ F+GA +EDLCLDF
Sbjct: 1626 QDLDLHDILFIDAELGKTLQEFNALVCRKHYIESIGGSYTDTIVNLYFHGAPIEDLCLDF 1685

Query: 533  TLPGYPNYVMKPCDEMV 583
            TLPGYP Y +KP DE+V
Sbjct: 1686 TLPGYPEYTLKPGDEIV 1702



 Score = 52.0 bits (123), Expect(2) = 1e-25
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = +1

Query: 682  VDINNLEECISLYVDATVRVRIFKQLEAFRVRFNQV 789
            VDINNLEE ISL +DATV+  I +Q+EAFR  FNQV
Sbjct: 1702 VDINNLEEYISLVIDATVKTGIMRQIEAFRAGFNQV 1737


>ref|XP_003537809.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Glycine max]
          Length = 1872

 Score = 93.2 bits (230), Expect(2) = 1e-25
 Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
 Frame = +2

Query: 347  ICDQELKLHYTLSFDAKLGKSLLELQALVCRK*YLESTRGQ-VHKVVDIRFYGASVEDLC 523
            +  QEL LH  L  DA+LGK+L EL ALVCRK Y++ST G       ++ F GA +EDLC
Sbjct: 1604 VLGQELDLHDILFIDAELGKTLQELNALVCRKHYIQSTGGSYTDTFANLHFRGAPIEDLC 1663

Query: 524  LDFTLPGYPNYVMKPCDEMV 583
            LDFTLPGYP Y++KP DE+V
Sbjct: 1664 LDFTLPGYPEYILKPGDEIV 1683



 Score = 50.1 bits (118), Expect(2) = 1e-25
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +1

Query: 682  VDINNLEECISLYVDATVRVRIFKQLEAFRVRFNQV 789
            VDINNLEE IS+ V+ATV+  I +Q+EAFR  FNQV
Sbjct: 1683 VDINNLEEYISMVVEATVKTGIMRQMEAFRAGFNQV 1718


>ref|XP_002278408.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like isoform 1 [Vitis
            vinifera]
          Length = 1896

 Score = 90.5 bits (223), Expect(2) = 3e-25
 Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
 Frame = +2

Query: 272  LVQEAIPNNKLVKFKIFGRNVLLLNICDQELKLHYTLSFDAKLGKSLLELQALVCRK*YL 451
            ++ +A+ + +L+   +     L   +  QEL LH  LSFDA  GK L ELQ LV RK YL
Sbjct: 1604 VIAKALQDGRLLDLPL--STALYKLVLGQELDLHDILSFDADFGKILQELQVLVSRKQYL 1661

Query: 452  ESTRGQVHKVV-DIRFYGASVEDLCLDFTLPGYPNYVMKPCDEMV 583
            EST G     + ++ F GA +EDLCLDFTLPGYP+Y++KP +E V
Sbjct: 1662 ESTGGDNQDAIANLCFRGAPIEDLCLDFTLPGYPDYILKPGEENV 1706



 Score = 51.6 bits (122), Expect(2) = 3e-25
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = +1

Query: 682  VDINNLEECISLYVDATVRVRIFKQLEAFRVRFNQV 789
            VDINNLEE ISL VDATV+  I +Q+EAFR  FNQV
Sbjct: 1706 VDINNLEEYISLVVDATVKTGIMRQMEAFRSGFNQV 1741


>ref|XP_002278452.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like isoform 2 [Vitis
            vinifera]
          Length = 1814

 Score = 90.5 bits (223), Expect(2) = 3e-25
 Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
 Frame = +2

Query: 272  LVQEAIPNNKLVKFKIFGRNVLLLNICDQELKLHYTLSFDAKLGKSLLELQALVCRK*YL 451
            ++ +A+ + +L+   +     L   +  QEL LH  LSFDA  GK L ELQ LV RK YL
Sbjct: 1525 VIAKALQDGRLLDLPL--STALYKLVLGQELDLHDILSFDADFGKILQELQVLVSRKQYL 1582

Query: 452  ESTRGQVHKVV-DIRFYGASVEDLCLDFTLPGYPNYVMKPCDEMV 583
            EST G     + ++ F GA +EDLCLDFTLPGYP+Y++KP +E V
Sbjct: 1583 ESTGGDNQDAIANLCFRGAPIEDLCLDFTLPGYPDYILKPGEENV 1627



 Score = 51.6 bits (122), Expect(2) = 3e-25
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = +1

Query: 682  VDINNLEECISLYVDATVRVRIFKQLEAFRVRFNQV 789
            VDINNLEE ISL VDATV+  I +Q+EAFR  FNQV
Sbjct: 1627 VDINNLEEYISLVVDATVKTGIMRQMEAFRSGFNQV 1662


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