BLASTX nr result

ID: Cnidium21_contig00015098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015098
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305762.1| predicted protein [Populus trichocarpa] gi|2...   529   e-148
ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helica...   526   e-147
ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinu...   522   e-146
ref|XP_003593709.1| ATP-dependent RNA helicase dhx8 [Medicago tr...   515   e-144
ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helica...   512   e-143

>ref|XP_002305762.1| predicted protein [Populus trichocarpa] gi|222848726|gb|EEE86273.1|
            predicted protein [Populus trichocarpa]
          Length = 702

 Score =  529 bits (1363), Expect = e-148
 Identities = 257/305 (84%), Positives = 284/305 (93%), Gaps = 1/305 (0%)
 Frame = -3

Query: 975  GRAGRVRPGKCYRLYTEEYYVNELSTEGIPEIQRTSLVSSVIQLKALGIDNILGFDWPAS 796
            GRAGRVRPGKCYRLYTEEY+VNE+S+ GIPE+QR+ LVS VIQLKALGIDNILGFDWPAS
Sbjct: 395  GRAGRVRPGKCYRLYTEEYFVNEMSSVGIPEMQRSKLVSCVIQLKALGIDNILGFDWPAS 454

Query: 795  PSPEAMIRALEVLYSLGVIDDDAKLTSPDGFQIAEIPLDPMISKMILASNELGCSDEILT 616
            P PEAMIRALEVLYSLGV+DDDAKLTSP GFQ AEIPLDPMISKMIL+SN+LGCSDEI+T
Sbjct: 455  PPPEAMIRALEVLYSLGVLDDDAKLTSPVGFQAAEIPLDPMISKMILSSNQLGCSDEIIT 514

Query: 615  IAAVLSIQSIWVSSRGSQKELDEAKMRFAAAEGDHVTFLNVYKGFLKCNKSPTWCHKNFV 436
            IAA+LSIQSIWVS RG QKELDEAK+RFAAAEGDHVTFLNVYKGFL+  KS  WCHKN++
Sbjct: 515  IAAILSIQSIWVSGRGVQKELDEAKLRFAAAEGDHVTFLNVYKGFLQSGKSSQWCHKNYM 574

Query: 435  NYQAMKKVIEVREQLKRTAQRIGINLKSCDGDTQVVRKAVTAGYFANACRLEAFSHSGMY 256
            NYQAMKKVIE+REQL+RTA R+GI LKSC+GD   VRKAVTAG+FANA RLEAFSH+GMY
Sbjct: 575  NYQAMKKVIEIREQLRRTALRLGIVLKSCEGDMLAVRKAVTAGFFANASRLEAFSHNGMY 634

Query: 255  KTLRGSQEVYIHPSSILFRVNPKWIIFHSLVSTDRQYMRNVITIDPSWLMEAAPHFYQ-Q 79
            KT+RGSQEVYIHPSS+LFRVNPKW+I+HSLVSTDRQYMRNV+T+DPSWL EAAPHF+Q Q
Sbjct: 635  KTVRGSQEVYIHPSSVLFRVNPKWVIYHSLVSTDRQYMRNVMTVDPSWLTEAAPHFFQHQ 694

Query: 78   RQPDS 64
            R PDS
Sbjct: 695  RTPDS 699


>ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Cucumis
            sativus] gi|449515633|ref|XP_004164853.1| PREDICTED:
            probable ATP-dependent RNA helicase DHX35-like [Cucumis
            sativus]
          Length = 696

 Score =  526 bits (1355), Expect = e-147
 Identities = 245/301 (81%), Positives = 282/301 (93%)
 Frame = -3

Query: 975  GRAGRVRPGKCYRLYTEEYYVNELSTEGIPEIQRTSLVSSVIQLKALGIDNILGFDWPAS 796
            GRAGR+RPGKCYRLYTEEY++NE+  EGIPE+QR++LV+ VIQLKALGIDNILGFDWP+ 
Sbjct: 390  GRAGRIRPGKCYRLYTEEYFINEMPAEGIPEMQRSNLVTCVIQLKALGIDNILGFDWPSP 449

Query: 795  PSPEAMIRALEVLYSLGVIDDDAKLTSPDGFQIAEIPLDPMISKMILASNELGCSDEILT 616
            PSPE M+RALEVLYSLGV+DDDAKLTSP GFQ+AEIPL+PMISKMILAS ELGCS+EI+T
Sbjct: 450  PSPEVMVRALEVLYSLGVLDDDAKLTSPIGFQVAEIPLEPMISKMILASGELGCSEEIMT 509

Query: 615  IAAVLSIQSIWVSSRGSQKELDEAKMRFAAAEGDHVTFLNVYKGFLKCNKSPTWCHKNFV 436
            IAAVLSIQSIW SSRG+QKELDEA++RFAAAEGDHVTFLNVYKGFL+ NKS  WCHKNF+
Sbjct: 510  IAAVLSIQSIWASSRGAQKELDEARLRFAAAEGDHVTFLNVYKGFLQSNKSSQWCHKNFI 569

Query: 435  NYQAMKKVIEVREQLKRTAQRIGINLKSCDGDTQVVRKAVTAGYFANACRLEAFSHSGMY 256
            NYQAMKKV+EVREQL+R AQR+GI +KSC+ DT  +RKAVTAG+FANAC++EA+SH+GMY
Sbjct: 570  NYQAMKKVMEVREQLRRIAQRLGIIMKSCERDTTAIRKAVTAGFFANACQIEAYSHNGMY 629

Query: 255  KTLRGSQEVYIHPSSILFRVNPKWIIFHSLVSTDRQYMRNVITIDPSWLMEAAPHFYQQR 76
            KT+RGSQEVYIHPSS+LFRVNPKW+++HSLVSTDRQYMRNV+TIDP WL E APHFYQQR
Sbjct: 630  KTVRGSQEVYIHPSSVLFRVNPKWVVYHSLVSTDRQYMRNVVTIDPGWLTEVAPHFYQQR 689

Query: 75   Q 73
            Q
Sbjct: 690  Q 690


>ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223538218|gb|EEF39827.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 696

 Score =  522 bits (1345), Expect = e-146
 Identities = 252/303 (83%), Positives = 286/303 (94%)
 Frame = -3

Query: 975  GRAGRVRPGKCYRLYTEEYYVNELSTEGIPEIQRTSLVSSVIQLKALGIDNILGFDWPAS 796
            GRAGRVRPGKCYRLYTEEY++NE+ T+GIPE+QR++LVSSVIQLKALGIDNILGFDWPAS
Sbjct: 391  GRAGRVRPGKCYRLYTEEYFINEMPTQGIPEMQRSNLVSSVIQLKALGIDNILGFDWPAS 450

Query: 795  PSPEAMIRALEVLYSLGVIDDDAKLTSPDGFQIAEIPLDPMISKMILASNELGCSDEILT 616
            PSPEAMIRALEVLYSLG++DDDAKLTSP GFQ+AE PL+PMISKMIL+SN+LGCS+EI+T
Sbjct: 451  PSPEAMIRALEVLYSLGILDDDAKLTSPVGFQVAESPLEPMISKMILSSNQLGCSEEIIT 510

Query: 615  IAAVLSIQSIWVSSRGSQKELDEAKMRFAAAEGDHVTFLNVYKGFLKCNKSPTWCHKNFV 436
            IAAVLSIQSIW+S+R +QKELDEAK+RFAAAEGDHVTFLNVY+GFL+  KS  WCHKNFV
Sbjct: 511  IAAVLSIQSIWISTR-AQKELDEAKLRFAAAEGDHVTFLNVYQGFLQSGKSSQWCHKNFV 569

Query: 435  NYQAMKKVIEVREQLKRTAQRIGINLKSCDGDTQVVRKAVTAGYFANACRLEAFSHSGMY 256
            NY AMKKVIEVREQL+R A RIGI LKSC+ D  +VRKAVTAG+FANACRLEAFSH+GMY
Sbjct: 570  NYHAMKKVIEVREQLRRIALRIGIVLKSCERDMLIVRKAVTAGFFANACRLEAFSHNGMY 629

Query: 255  KTLRGSQEVYIHPSSILFRVNPKWIIFHSLVSTDRQYMRNVITIDPSWLMEAAPHFYQQR 76
            KT+RGSQEVYIHPSS+LFRVNPKW+I+HSLVSTDRQYMRNVITIDPSWL EAAP+F+QQ+
Sbjct: 630  KTVRGSQEVYIHPSSVLFRVNPKWVIYHSLVSTDRQYMRNVITIDPSWLTEAAPNFFQQQ 689

Query: 75   QPD 67
            + D
Sbjct: 690  RSD 692


>ref|XP_003593709.1| ATP-dependent RNA helicase dhx8 [Medicago truncatula]
            gi|355482757|gb|AES63960.1| ATP-dependent RNA helicase
            dhx8 [Medicago truncatula]
          Length = 701

 Score =  515 bits (1327), Expect = e-144
 Identities = 245/303 (80%), Positives = 280/303 (92%)
 Frame = -3

Query: 975  GRAGRVRPGKCYRLYTEEYYVNELSTEGIPEIQRTSLVSSVIQLKALGIDNILGFDWPAS 796
            GRAGRVRPGKCYRLYTEE+++N +S EGIPEIQR++LVS VIQLKALGIDNILGFDWPAS
Sbjct: 396  GRAGRVRPGKCYRLYTEEFFLNHMSNEGIPEIQRSNLVSCVIQLKALGIDNILGFDWPAS 455

Query: 795  PSPEAMIRALEVLYSLGVIDDDAKLTSPDGFQIAEIPLDPMISKMILASNELGCSDEILT 616
            PSPEAMIRALEVLYSLG++DDDAKLTSP GFQ+AEIPLDPMISKMI+AS++LGCS+EI+T
Sbjct: 456  PSPEAMIRALEVLYSLGILDDDAKLTSPTGFQVAEIPLDPMISKMIIASSQLGCSEEIIT 515

Query: 615  IAAVLSIQSIWVSSRGSQKELDEAKMRFAAAEGDHVTFLNVYKGFLKCNKSPTWCHKNFV 436
            IAA LS+QSIW+S RG QKE DEAK+RFAAAEGDHVTFLNVYKGF +  KS  WCHKNFV
Sbjct: 516  IAAALSVQSIWISGRGIQKESDEAKLRFAAAEGDHVTFLNVYKGFHQSRKSSQWCHKNFV 575

Query: 435  NYQAMKKVIEVREQLKRTAQRIGINLKSCDGDTQVVRKAVTAGYFANACRLEAFSHSGMY 256
            NY AMKKV+EVREQL+R AQRIG+ LKSC+ D QVV+KAV AG+FANACRLE +S  GMY
Sbjct: 576  NYHAMKKVLEVREQLRRIAQRIGLVLKSCESDMQVVKKAVIAGFFANACRLEPYSPDGMY 635

Query: 255  KTLRGSQEVYIHPSSILFRVNPKWIIFHSLVSTDRQYMRNVITIDPSWLMEAAPHFYQQR 76
            KTLRGS+EVYIHPSS+LFRVNPKW+IF+SLVSTDR+YMRNV+TIDPSWL+EAAPHFY+ +
Sbjct: 636  KTLRGSEEVYIHPSSVLFRVNPKWVIFNSLVSTDRKYMRNVMTIDPSWLLEAAPHFYKLQ 695

Query: 75   QPD 67
            QP+
Sbjct: 696  QPN 698


>ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vitis vinifera]
          Length = 695

 Score =  512 bits (1318), Expect = e-143
 Identities = 247/303 (81%), Positives = 281/303 (92%), Gaps = 1/303 (0%)
 Frame = -3

Query: 975  GRAGRVRPGKCYRLYTEEYYVNELSTEGIPEIQRTSLVSSVIQLKALGIDNILGFDWPAS 796
            GRAGRVRPGKCYRLYTEEY+VNE+S   IPE+QR++LVS VIQLKALGIDNILGFDWPAS
Sbjct: 390  GRAGRVRPGKCYRLYTEEYFVNEMSAHAIPEMQRSNLVSCVIQLKALGIDNILGFDWPAS 449

Query: 795  PSPEAMIRALEVLYSLGVIDDDAKLTSPDGFQIAEIPLDPMISKMILASNELGCSDEILT 616
            PSPEAMIRALEVLYSLGV+DDDAKLTSP GFQ+AEIPLDPMISK IL+SN+LGCS+EI+T
Sbjct: 450  PSPEAMIRALEVLYSLGVLDDDAKLTSPLGFQVAEIPLDPMISKTILSSNQLGCSEEIIT 509

Query: 615  IAAVLSIQSIWVSSRGSQKELDEAKMRFAAAEGDHVTFLNVYKGFLKCNKSPTWCHKNFV 436
            IAA+LS+QSIWVS+RG+Q+ELDEAKMRFAAAEGDHVT+L+VYKGF++  KS  WC+KNF+
Sbjct: 510  IAAILSVQSIWVSARGAQRELDEAKMRFAAAEGDHVTYLSVYKGFIQSGKSSQWCYKNFI 569

Query: 435  NYQAMKKVIEVREQLKRTAQRIGINLKSCDGDTQVVRKAVTAGYFANACRLEAFSHSGMY 256
            NY AMKKVIE+REQL+R AQR+GI LKSC+ D +VVRKAVTAG+FANAC LEA S  GMY
Sbjct: 570  NYHAMKKVIEIREQLRRIAQRLGIVLKSCERDMEVVRKAVTAGFFANACCLEAHSQGGMY 629

Query: 255  KTLRGSQEVYIHPSSILFRVNPKWIIFHSLVSTDRQYMRNVITIDPSWLMEAAPHFY-QQ 79
            KT+R +QEVYIHPSS+LFRVNPKWII++SLVSTDRQYMRNVI+IDPSWLMEAAPHFY QQ
Sbjct: 630  KTIRSAQEVYIHPSSVLFRVNPKWIIYNSLVSTDRQYMRNVISIDPSWLMEAAPHFYRQQ 689

Query: 78   RQP 70
            R P
Sbjct: 690  RNP 692


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