BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015053
         (1665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin...   174   6e-41
ref|XP_002533810.1| nuclear receptor binding set domain containi...   153   1e-34
ref|XP_002310841.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-29
emb|CBI17411.3| unnamed protein product [Vitis vinifera]               91   9e-16
ref|NP_190681.6| zinc finger CCCH domain-containing protein 44 [...    67   2e-08

>ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like [Vitis
            vinifera]
          Length = 1643

 Score =  174 bits (441), Expect = 6e-41
 Identities = 132/382 (34%), Positives = 183/382 (47%), Gaps = 7/382 (1%)
 Frame = -3

Query: 1579 KESDGDRHGNIARIHCTSKSELSRNDGWDSQPSVWTAPV-VSCIKEEPLVSCSKEPDSFM 1403
            K ++G  + N A I     +EL + DGW S  S W+ P  +   KE  + S S+  DS  
Sbjct: 1043 KLNEGPGNSNDATIS-NGNNELVKRDGWGSCSSSWSTPADIMNSKEVEIGSFSQGWDSLK 1101

Query: 1402 GNSSCYKQRQVQSPPSSITLVGGENMT--HSGDRMNHEVKGCKSEPDNEYQXXXXXXXXX 1229
            GNSS   Q QV S  SS TL G    T  H G                            
Sbjct: 1102 GNSSWSDQPQVYSSLSSSTLSGKSFGTGLHQG---------------------------- 1133

Query: 1228 XSGEHIRDDHSNSRCLSGQSSGDNRRNSPADFSSNTWKLNSVP--SLTNLNVAPEQNGKS 1055
                  R+ H   R   GQ+ G+   +  A    N+      P  +   L++    +G  
Sbjct: 1134 ------REGHGVERWDPGQNHGNLNSHRTAVVQVNSGHSGQSPKENCRPLSIISSSSGWD 1187

Query: 1054 NVTDVHSPSRKTNSEKYKGDTNENKESISSTVHIKDSRFPDLPSPTPKAGIDYQIGLADE 875
            +  DV S ++ + + +   D N                FP+LPSPTPK       G A E
Sbjct: 1188 SNFDVVSVAKLSKTLEQDHDIN----------------FPNLPSPTPKPSDGDWKGQAAE 1231

Query: 874  TRQALSLNLPYQDSCPNWSNTSSVVVGELQLVDISDDWGGY-SPTPVKHSVDEWDPSLIS 698
            ++Q++S ++P QDS P+WS  SS+V G  +L +++ DWGGY SPTP+K SV+EWD +L S
Sbjct: 1232 SKQSVSSDVPVQDSGPSWSTASSLVGGGTKLPEVASDWGGYSSPTPMKPSVEEWDSTLAS 1291

Query: 697  L-PIKPAQGLCDHVATATSRGGELDFFSTSHPASHLSCWQTDVREQIEFSTLAEESVSDL 521
            +  +KP +   DH AT TS   +L   S  +P  + S WQ       E S++ E SVSDL
Sbjct: 1292 VSSLKPTEVASDHAATPTSESVQLTHSSPPYPTPNASSWQPIDTGPTEISSVTEASVSDL 1351

Query: 520  LAQVDAMEAQCDLPSPTSTMKC 455
            LA+V+AME+   LPSPTS MKC
Sbjct: 1352 LAEVEAMESLDGLPSPTSVMKC 1373


>ref|XP_002533810.1| nuclear receptor binding set domain containing protein 1, nsd,
            putative [Ricinus communis] gi|223526264|gb|EEF28579.1|
            nuclear receptor binding set domain containing protein 1,
            nsd, putative [Ricinus communis]
          Length = 1586

 Score =  153 bits (387), Expect = 1e-34
 Identities = 101/244 (41%), Positives = 131/244 (53%), Gaps = 1/244 (0%)
 Frame = -3

Query: 1180 SGQSSGDNRRNSPADFSSNTWKLNSVPSLTNLNVAPEQNGKSNVTDVHSPSRKTNSEKYK 1001
            S QSSG N R  P D SS+ W  N+                         S   +SEK  
Sbjct: 1051 SSQSSGQNWRPQPVDSSSSRWDSNT----------------------GCVSMAKSSEK-- 1086

Query: 1000 GDTNENKESISSTVHIKDSRFPDLPSPTPKAGIDYQIGLADETRQALSLNLPYQDSCPNW 821
              + +N+E + S          DLPSPTPK   +   G A E + ++S + P QDS P+W
Sbjct: 1087 --SEQNQEIVVS----------DLPSPTPKQSHEELKGQA-ENKLSVSSSAPVQDSGPSW 1133

Query: 820  SNTSSVVVGELQLVDISDDWGGYSPTPVKHSVDEWDPSLISLP-IKPAQGLCDHVATATS 644
            S  SS+VVG  QL +++ +WGGYSP   K SV+EWD +L+S+  +KP +G  DH AT TS
Sbjct: 1134 STASSLVVGR-QLPEVAGEWGGYSPASAKPSVEEWDSNLVSVSSLKPTEGANDHAATPTS 1192

Query: 643  RGGELDFFSTSHPASHLSCWQTDVREQIEFSTLAEESVSDLLAQVDAMEAQCDLPSPTST 464
               +L   S   P    S WQ  V E  EF +L +ESVSDLLA+V+AME+   LPSPTS 
Sbjct: 1193 GTDKLTNSSPPQPELDTSTWQPLVPEPNEFCSLVDESVSDLLAEVEAMESLGGLPSPTSK 1252

Query: 463  MKCG 452
            M CG
Sbjct: 1253 MSCG 1256


>ref|XP_002310841.1| predicted protein [Populus trichocarpa] gi|222853744|gb|EEE91291.1|
            predicted protein [Populus trichocarpa]
          Length = 1256

 Score =  137 bits (344), Expect = 1e-29
 Identities = 89/238 (37%), Positives = 122/238 (51%), Gaps = 10/238 (4%)
 Frame = -3

Query: 1141 ADFSSNTWKLNSVPSLTNLNVAPEQNGKSNVTDV---HSPSRKTNSEKYKGDTNENKESI 971
            +D S     L+S+PS   +   P    K    D    H      +S   K      K  I
Sbjct: 798  SDQSQMCSSLSSLPSSGKIGEIPLPQAKEEHEDEKRSHDVVMGMHSRHLKVKITLAKVRI 857

Query: 970  SSTVHIKDSR------FPDLPSPTPKAGIDYQIGLADETRQALSLNLPYQDSCPNWSNTS 809
            +  + ++ S+      F DLPSPTPK  +    G   E   ++S  LP  DS  +WS  S
Sbjct: 858  NRLISVETSQKNEEIDFFDLPSPTPKQHLKDLKGHTAENNHSISSKLPVLDSGCSWSTAS 917

Query: 808  SVVVGELQLVDISDDWGGYSPTPVKHSVDEWDPSLISLP-IKPAQGLCDHVATATSRGGE 632
            S+VVG   L  ++ +WGGYSP PVK  V+EWD + +S   +KP  G  DH +T T   G 
Sbjct: 918  SLVVGGATLARVAGEWGGYSPAPVK-PVEEWDSNHVSASSLKPTDGGSDHASTQTPDSGP 976

Query: 631  LDFFSTSHPASHLSCWQTDVREQIEFSTLAEESVSDLLAQVDAMEAQCDLPSPTSTMK 458
            L    ++HP    S WQ  + E  EF +L +ESVSDLLA+V+AME+   LPSPTS ++
Sbjct: 977  LAHSPSTHPVIDASDWQRIIPEPTEFCSLVDESVSDLLAEVEAMESLGGLPSPTSKLR 1034


>emb|CBI17411.3| unnamed protein product [Vitis vinifera]
          Length = 1362

 Score = 90.9 bits (224), Expect = 9e-16
 Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = -3

Query: 751  SPTPVKHSVDEWDPSLISLP-IKPAQGLCDHVATATSRGGELDFFSTSHPASHLSCWQTD 575
            SPTP+K SV+EWD +L S+  +KP +   DH AT TS   +L   S  +P  + S WQ  
Sbjct: 1054 SPTPMKPSVEEWDSTLASVSSLKPTEVASDHAATPTSESVQLTHSSPPYPTPNASSWQPI 1113

Query: 574  VREQIEFSTLAEESVSDLLAQVDAMEAQCDLPSPTSTMKC 455
                 E S++ E SVSDLLA+V+AME+   LPSPTS MKC
Sbjct: 1114 DTGPTEISSVTEASVSDLLAEVEAMESLDGLPSPTSVMKC 1153


>ref|NP_190681.6| zinc finger CCCH domain-containing protein 44 [Arabidopsis thaliana]
            gi|334302924|sp|Q9SD34.3|C3H44_ARATH RecName: Full=Zinc
            finger CCCH domain-containing protein 44; Short=AtC3H44
            gi|332645232|gb|AEE78753.1| zinc finger CCCH
            domain-containing protein 44 [Arabidopsis thaliana]
          Length = 1292

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 64/211 (30%), Positives = 90/211 (42%), Gaps = 5/211 (2%)
 Frame = -3

Query: 1072 EQNGKSNVTDVHSPSRKTNSEKYKGDTNENKESISSTVHI----KDSRFPDLPSPTPKAG 905
            E  G      V +      ++  + +TN    SI+ +VH     ++S F D PSPTPK+ 
Sbjct: 879  ETPGTDQYNTVRADGNHNTTKTLEDETNGGSVSINGSVHAPNLNQESHFLDFPSPTPKSS 938

Query: 904  IDYQIGLADETRQALS-LNLPYQDSCPNWSNTSSVVVGELQLVDISDDWGGYSPTPVKHS 728
             +     A ET Q+LS   L    S   WS T++               GG  P  ++ +
Sbjct: 939  PEDLEAQAAETIQSLSSCVLVKGPSGVTWSTTTTSTTDAATTTSSVVVTGGQLPQVIQQN 998

Query: 727  VDEWDPSLISLPIKPAQGLCDHVATATSRGGELDFFSTSHPASHLSCWQTDVREQIEFST 548
                   L +  +KP +   DH ATAT         S +   +  S W   V +  E   
Sbjct: 999  T----VVLAAPSVKPIELAADH-ATATQT-------SDNTQVAQASGWPAIVADPDE--- 1043

Query: 547  LAEESVSDLLAQVDAMEAQCDLPSPTSTMKC 455
              +ESVSDLLA+V+AME      SPTST  C
Sbjct: 1044 -CDESVSDLLAEVEAMEQNGLPSSPTSTFHC 1073