BLASTX nr result

ID: Cnidium21_contig00015051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015051
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 ...   100   2e-24
ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus...    95   2e-22
ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-...    86   3e-19
ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-...    87   3e-19
ref|XP_002305996.1| high mobility group family [Populus trichoca...   100   3e-19

>ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 [Vitis vinifera]
           gi|297740668|emb|CBI30850.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score =  100 bits (248), Expect(2) = 2e-24
 Identities = 45/55 (81%), Positives = 52/55 (94%)
 Frame = +3

Query: 333 VGKACGEKWKTMSYEEKVQYYDIATEKRAEFDRAMADYIKRKERGEDTKPKDSDS 497
           +GKACGEKWKTM+YEEKVQYYDIATEKRAEFDRAMADYIKR+E GED + +DS++
Sbjct: 119 IGKACGEKWKTMTYEEKVQYYDIATEKRAEFDRAMADYIKRQESGEDEEIEDSEA 173



 Score = 38.5 bits (88), Expect(2) = 2e-24
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
 Frame = +1

Query: 166 KMVLRVRPPQKMKQVE-----DDIXXXXXXXXXXXXXXXXXXXXIDSDKPKKPPTAFFYF 330
           +MVLRVR  +K+K+        +                     +DS KPKKPPTAFFYF
Sbjct: 39  RMVLRVRSTEKIKRAVMESRVSEKEKKPRSGNKAKAKTKKRSQRVDSKKPKKPPTAFFYF 98

Query: 331 L 333
           L
Sbjct: 99  L 99


>ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus communis]
           gi|223541125|gb|EEF42681.1| DNA-binding protein MNB1B,
           putative [Ricinus communis]
          Length = 198

 Score = 94.7 bits (234), Expect(2) = 2e-22
 Identities = 44/59 (74%), Positives = 53/59 (89%)
 Frame = +3

Query: 333 VGKACGEKWKTMSYEEKVQYYDIATEKRAEFDRAMADYIKRKERGEDTKPKDSDSEYDE 509
           +GKACGEKWK M+YEEKV+YYDIATEKRAEFD+AMA+YIK+KE GE  + +D DSE+DE
Sbjct: 141 IGKACGEKWKMMTYEEKVKYYDIATEKRAEFDKAMAEYIKKKESGEFEEVED-DSEFDE 198



 Score = 37.4 bits (85), Expect(2) = 2e-22
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +1

Query: 283 IDSDKPKKPPTAFFYFL 333
           +DS KPKKPPTAFFYFL
Sbjct: 105 LDSKKPKKPPTAFFYFL 121


>ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus]
           gi|449505924|ref|XP_004162605.1| PREDICTED: high
           mobility group B protein 14-like [Cucumis sativus]
          Length = 161

 Score = 86.3 bits (212), Expect(2) = 3e-19
 Identities = 39/52 (75%), Positives = 45/52 (86%)
 Frame = +3

Query: 333 VGKACGEKWKTMSYEEKVQYYDIATEKRAEFDRAMADYIKRKERGEDTKPKD 488
           VGKACGEKWKTM+YEEKVQYYDIATEKRAEFD+AM +Y KR E G D + ++
Sbjct: 104 VGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRMESGIDQESEE 155



 Score = 35.0 bits (79), Expect(2) = 3e-19
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +1

Query: 286 DSDKPKKPPTAFFYFL 333
           D +KPKKPPTAFFYFL
Sbjct: 69  DVNKPKKPPTAFFYFL 84


>ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-like [Glycine max]
          Length = 148

 Score = 86.7 bits (213), Expect(2) = 3e-19
 Identities = 40/59 (67%), Positives = 49/59 (83%)
 Frame = +3

Query: 333 VGKACGEKWKTMSYEEKVQYYDIATEKRAEFDRAMADYIKRKERGEDTKPKDSDSEYDE 509
           +GKACGEKWKTM+YEEKVQYYDIAT+KR EFD AMA++ K+ E GE  +  D +SE+DE
Sbjct: 91  IGKACGEKWKTMTYEEKVQYYDIATKKREEFDNAMAEFNKKMENGEFDE-TDDESEFDE 148



 Score = 34.7 bits (78), Expect(2) = 3e-19
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +1

Query: 286 DSDKPKKPPTAFFYFL 333
           D+ KPKKPPTAFFYFL
Sbjct: 56  DAMKPKKPPTAFFYFL 71


>ref|XP_002305996.1| high mobility group family [Populus trichocarpa]
           gi|222848960|gb|EEE86507.1| high mobility group family
           [Populus trichocarpa]
          Length = 165

 Score =  100 bits (249), Expect = 3e-19
 Identities = 47/59 (79%), Positives = 54/59 (91%)
 Frame = +3

Query: 333 VGKACGEKWKTMSYEEKVQYYDIATEKRAEFDRAMADYIKRKERGEDTKPKDSDSEYDE 509
           VGKACGEKWKTM+YEEKV+YYDIATEKRAEFDRA ++YIKRKE GED  P+D+ SE+DE
Sbjct: 108 VGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRATSEYIKRKESGEDEDPEDA-SEFDE 165


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