BLASTX nr result

ID: Cnidium21_contig00015032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015032
         (1561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like...   509   e-142
ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|2...   506   e-141
gb|ABK94828.1| unknown [Populus trichocarpa]                          505   e-140
ref|XP_004150129.1| PREDICTED: ribosome biogenesis GTPase A-like...   494   e-137
ref|NP_001242175.1| uncharacterized protein LOC100784201 [Glycin...   489   e-135

>ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like [Vitis vinifera]
            gi|296086696|emb|CBI32331.3| unnamed protein product
            [Vitis vinifera]
          Length = 367

 Score =  509 bits (1312), Expect = e-142
 Identities = 255/340 (75%), Positives = 283/340 (83%), Gaps = 2/340 (0%)
 Frame = -3

Query: 1286 STVCAASPPH--PTSTIQIVGGNNPGWYGNSNLHFSNTFGSHEEEFDWSDLDNDLYHWTK 1113
            ST   A+ PH   +STIQIVGG + G Y N  +  + TF    EE  W++LD DLYHWTK
Sbjct: 27   STTALAATPHLASSSTIQIVGGKSHGQYVNGGVSSNRTFEDISEESYWTNLDADLYHWTK 86

Query: 1112 TLRPVQWYPGHIAKTXXXXXXXXXLMDVVIEVRDARIPMSTSHPQMDAWLGNRKRILVLN 933
             LRP+QWYPGHIAKT         LMDVVIEV+DARIP+STSHPQM++WLGNRKRILVLN
Sbjct: 87   KLRPIQWYPGHIAKTEKELKEQLKLMDVVIEVQDARIPLSTSHPQMESWLGNRKRILVLN 146

Query: 932  REDMISAADRNAWATYYANQGTKVVFANGKLGMGALKMGRLAKTLAAGVNIKRKAKGLLP 753
            REDMIS  DRNAWATYYA QG KVVF+NG+LGMG++K+ RLAKTLA+GVN+KR+AKGLLP
Sbjct: 147  REDMISTEDRNAWATYYAMQGIKVVFSNGQLGMGSMKLSRLAKTLASGVNVKRRAKGLLP 206

Query: 752  RPVRAGIVGYPNVGKSSLINRLLKRRMCLAAPRPGVTRVLKWVRFGTDLELLDSPGIIPM 573
            RPVRAGIVGYPNVGKSSLINRLLKRRMC AAPRPGVTR LKWV+FG DLELLDSPGIIPM
Sbjct: 207  RPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRQLKWVQFGKDLELLDSPGIIPM 266

Query: 572  RISDQSAAIKLAICDDIGERSYDFADVAAILVQMLTKFPSVGNSVLCQRYKLDADSHCGK 393
            RISDQSAAIKLAICDDIGERSYD ADVAAILVQMLT+ P+VG   L  RYK+D D  CG 
Sbjct: 267  RISDQSAAIKLAICDDIGERSYDVADVAAILVQMLTRIPAVGPKALYNRYKIDTDGLCGN 326

Query: 392  TYVQQLANHLFNGDSNQAAFRILADFRKGKFGWHALERPP 273
             +VQ+LA  LFNGD++QAAFRIL DFRKGKFGW ALERPP
Sbjct: 327  IFVQKLALQLFNGDTHQAAFRILTDFRKGKFGWIALERPP 366


>ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|222857032|gb|EEE94579.1|
            predicted protein [Populus trichocarpa]
          Length = 387

 Score =  506 bits (1302), Expect = e-141
 Identities = 254/340 (74%), Positives = 279/340 (82%), Gaps = 1/340 (0%)
 Frame = -3

Query: 1286 STVCAASPPHPTSTIQIVGGNN-PGWYGNSNLHFSNTFGSHEEEFDWSDLDNDLYHWTKT 1110
            S V  AS   P  TIQIVGG + P W G+ N    +  G   EE DW D + DLYHWTK 
Sbjct: 32   SLVTPASLSSPPPTIQIVGGKSTPSWQGSGN----DVCGGGGEETDWYDFETDLYHWTKP 87

Query: 1109 LRPVQWYPGHIAKTXXXXXXXXXLMDVVIEVRDARIPMSTSHPQMDAWLGNRKRILVLNR 930
            LRPVQWYPGHIAKT         LMDVVIEVRDARIP+ST+HPQMDAWLGNRKRILVLNR
Sbjct: 88   LRPVQWYPGHIAKTEKELKEQLKLMDVVIEVRDARIPLSTTHPQMDAWLGNRKRILVLNR 147

Query: 929  EDMISAADRNAWATYYANQGTKVVFANGKLGMGALKMGRLAKTLAAGVNIKRKAKGLLPR 750
            EDMIS ADRNAWATY+A QG KVV +NG+LGMG +K+ R AK+LAA VN+KR+ KGLLPR
Sbjct: 148  EDMISKADRNAWATYFARQGIKVVLSNGQLGMGTMKLSRFAKSLAASVNVKRREKGLLPR 207

Query: 749  PVRAGIVGYPNVGKSSLINRLLKRRMCLAAPRPGVTRVLKWVRFGTDLELLDSPGIIPMR 570
            PVRAGIVGYPNVGKSSLINRLLKRRMC AAPRPGVTR L+WVRFG DLELLDSPGIIPMR
Sbjct: 208  PVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGNDLELLDSPGIIPMR 267

Query: 569  ISDQSAAIKLAICDDIGERSYDFADVAAILVQMLTKFPSVGNSVLCQRYKLDADSHCGKT 390
            ISDQSAAIKLAICDDIGERSYD  DVAAILVQ+LTK P+VG   L  RYK+DAD  CGK 
Sbjct: 268  ISDQSAAIKLAICDDIGERSYDVTDVAAILVQILTKLPTVGAKALNNRYKMDADDFCGKI 327

Query: 389  YVQQLANHLFNGDSNQAAFRILADFRKGKFGWHALERPPN 270
            +VQ+L+ HLFNGD++QAAFRIL+DFRKGKFGW ALERPP+
Sbjct: 328  FVQKLSVHLFNGDTHQAAFRILSDFRKGKFGWAALERPPS 367


>gb|ABK94828.1| unknown [Populus trichocarpa]
          Length = 367

 Score =  505 bits (1301), Expect = e-140
 Identities = 254/339 (74%), Positives = 278/339 (82%), Gaps = 1/339 (0%)
 Frame = -3

Query: 1286 STVCAASPPHPTSTIQIVGGNN-PGWYGNSNLHFSNTFGSHEEEFDWSDLDNDLYHWTKT 1110
            S V  AS   P  TIQIVGG + P W G+ N    +  G   EE DW D + DLYHWTK 
Sbjct: 32   SLVTPASLSSPPPTIQIVGGKSTPSWQGSGN----DVCGGGGEETDWYDFETDLYHWTKP 87

Query: 1109 LRPVQWYPGHIAKTXXXXXXXXXLMDVVIEVRDARIPMSTSHPQMDAWLGNRKRILVLNR 930
            LRPVQWYPGHIAKT         LMDVVIEVRDARIP+ST+HPQMDAWLGNRKRILVLNR
Sbjct: 88   LRPVQWYPGHIAKTEKELKEQLKLMDVVIEVRDARIPLSTTHPQMDAWLGNRKRILVLNR 147

Query: 929  EDMISAADRNAWATYYANQGTKVVFANGKLGMGALKMGRLAKTLAAGVNIKRKAKGLLPR 750
            EDMIS ADRNAWATY+A QG KVV +NG+LGMG +K+ R AK+LAA VN+KR+ KGLLPR
Sbjct: 148  EDMISKADRNAWATYFARQGIKVVLSNGQLGMGTMKLSRFAKSLAASVNVKRREKGLLPR 207

Query: 749  PVRAGIVGYPNVGKSSLINRLLKRRMCLAAPRPGVTRVLKWVRFGTDLELLDSPGIIPMR 570
            PVRAGIVGYPNVGKSSLINRLLKRRMC AAPRPGVTR L+WVRFG DLELLDSPGIIPMR
Sbjct: 208  PVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGNDLELLDSPGIIPMR 267

Query: 569  ISDQSAAIKLAICDDIGERSYDFADVAAILVQMLTKFPSVGNSVLCQRYKLDADSHCGKT 390
            ISDQSAAIKLAICDDIGERSYD  DVAAILVQ+LTK P+VG   L  RYK+DAD  CGK 
Sbjct: 268  ISDQSAAIKLAICDDIGERSYDVTDVAAILVQILTKLPTVGAKALNNRYKMDADDFCGKI 327

Query: 389  YVQQLANHLFNGDSNQAAFRILADFRKGKFGWHALERPP 273
            +VQ+L+ HLFNGD++QAAFRIL+DFRKGKFGW ALERPP
Sbjct: 328  FVQKLSVHLFNGDTHQAAFRILSDFRKGKFGWAALERPP 366


>ref|XP_004150129.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
            gi|449507918|ref|XP_004163166.1| PREDICTED: ribosome
            biogenesis GTPase A-like [Cucumis sativus]
          Length = 370

 Score =  494 bits (1272), Expect = e-137
 Identities = 254/348 (72%), Positives = 284/348 (81%)
 Frame = -3

Query: 1316 SGPNPRSRPFSTVCAASPPHPTSTIQIVGGNNPGWYGNSNLHFSNTFGSHEEEFDWSDLD 1137
            SGP+P S   +   + S PHPT  IQIVGG    + G+S    ++   +   E DW D +
Sbjct: 27   SGPSPPS--LAPSASVSSPHPT--IQIVGGKTSNFLGDSTPKGASN--NELLEGDWVDFE 80

Query: 1136 NDLYHWTKTLRPVQWYPGHIAKTXXXXXXXXXLMDVVIEVRDARIPMSTSHPQMDAWLGN 957
             DLY+WT  LRPVQWYPGHIAKT         LMDVVIEVRDARIPMSTSHPQMDAWLGN
Sbjct: 81   ADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPMSTSHPQMDAWLGN 140

Query: 956  RKRILVLNREDMISAADRNAWATYYANQGTKVVFANGKLGMGALKMGRLAKTLAAGVNIK 777
            R+RILVLNREDMIS+ADRNAWATY+  QG KVVF+NG+ GMG +K+GRLAKTLAA VN+K
Sbjct: 141  RRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHGMGTMKLGRLAKTLAADVNVK 200

Query: 776  RKAKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCLAAPRPGVTRVLKWVRFGTDLELL 597
            R+AKGLLPR VRAGIVGYPNVGKSSLINRLLKRRMC AAPRPGVTR LKWVRFG DLELL
Sbjct: 201  RRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGNDLELL 260

Query: 596  DSPGIIPMRISDQSAAIKLAICDDIGERSYDFADVAAILVQMLTKFPSVGNSVLCQRYKL 417
            DSPGIIPMRISDQ+AAIKLAICDDIGERSY+ ADVAAILVQ+LTK PSVG   L +RYK+
Sbjct: 261  DSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQILTKLPSVGIETLQKRYKV 320

Query: 416  DADSHCGKTYVQQLANHLFNGDSNQAAFRILADFRKGKFGWHALERPP 273
            DA   CG+ +VQ+LA  LFNGD++QAAFRIL+DFRKGKFGW ALERPP
Sbjct: 321  DAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPP 368


>ref|NP_001242175.1| uncharacterized protein LOC100784201 [Glycine max]
            gi|255634965|gb|ACU17841.1| unknown [Glycine max]
          Length = 391

 Score =  489 bits (1258), Expect = e-135
 Identities = 249/351 (70%), Positives = 278/351 (79%), Gaps = 5/351 (1%)
 Frame = -3

Query: 1310 PNPRSRPFSTVCAASPPHPTSTIQIVGGNNPGW----YGNSNLHFSNTFGSHEEEFD-WS 1146
            PN      S + + SP     TIQI+G   P W    YGN N +  N F   + E D WS
Sbjct: 22   PNRGRFSASALSSQSP-----TIQIIGVGGPSWRENGYGNPNNN--NLFDGCQGESDHWS 74

Query: 1145 DLDNDLYHWTKTLRPVQWYPGHIAKTXXXXXXXXXLMDVVIEVRDARIPMSTSHPQMDAW 966
            +LD DLYHWTK LRPVQW+PGHIAK          LMDVVIEVRD RIPMSTSHPQMD W
Sbjct: 75   ELDTDLYHWTKALRPVQWFPGHIAKAEKELKEQLKLMDVVIEVRDGRIPMSTSHPQMDPW 134

Query: 965  LGNRKRILVLNREDMISAADRNAWATYYANQGTKVVFANGKLGMGALKMGRLAKTLAAGV 786
            LGNRKRILVLNREDMIS ADRNAWA Y+   GTKVVF+NG+LGMG +K+GRLAK LAA V
Sbjct: 135  LGNRKRILVLNREDMISTADRNAWADYFTRNGTKVVFSNGQLGMGTMKLGRLAKELAADV 194

Query: 785  NIKRKAKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCLAAPRPGVTRVLKWVRFGTDL 606
            N+KR++KGLLPR VRAGIVGYPNVGKSSLINRLLKRRMC AAPRPGVTR L+WVRFG DL
Sbjct: 195  NVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGKDL 254

Query: 605  ELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDFADVAAILVQMLTKFPSVGNSVLCQR 426
            ELLDSPGI+PMRISDQSAAIKLAICDDIGERSYD ADVAAILVQML+K P+VG   LC+R
Sbjct: 255  ELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVADVAAILVQMLSKLPTVGRDALCKR 314

Query: 425  YKLDADSHCGKTYVQQLANHLFNGDSNQAAFRILADFRKGKFGWHALERPP 273
            YK+D D   G+ ++++LA  +FNGD +QAAFR+LADFRKGKFGW ALERPP
Sbjct: 315  YKIDVDCRDGRIFIEKLAVRVFNGDVHQAAFRVLADFRKGKFGWTALERPP 365


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