BLASTX nr result

ID: Cnidium21_contig00015020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00015020
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305070.1| f-box family protein [Populus trichocarpa] g...   125   3e-27
ref|XP_002316826.1| f-box family protein [Populus trichocarpa] g...   125   5e-27
ref|XP_002266522.2| PREDICTED: dof zinc finger protein DOF1.5-li...   124   6e-27
emb|CBI30684.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002522580.1| hypothetical protein RCOM_1015170 [Ricinus c...   117   7e-25

>ref|XP_002305070.1| f-box family protein [Populus trichocarpa]
           gi|222848034|gb|EEE85581.1| f-box family protein
           [Populus trichocarpa]
          Length = 159

 Score =  125 bits (315), Expect = 3e-27
 Identities = 62/96 (64%), Positives = 69/96 (71%), Gaps = 12/96 (12%)
 Frame = -1

Query: 324 FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKMKPPCLGGVEGFPEGCLYDD 145
           FCYFNNYNVNQPR+FCKGCQRYWTAGGALRNVPVGAGRRK KPP   G++G+ EGCLYD 
Sbjct: 55  FCYFNNYNVNQPRYFCKGCQRYWTAGGALRNVPVGAGRRKTKPPGRVGLDGYSEGCLYDG 114

Query: 144 VGS--RVQPFDMVVE----------GDYVFPTKRRR 73
            G   R +   MV+E            +VFP KRRR
Sbjct: 115 SGGVHRFELDGMVLEEWHLATTHGSSRHVFPVKRRR 150


>ref|XP_002316826.1| f-box family protein [Populus trichocarpa]
           gi|222859891|gb|EEE97438.1| f-box family protein
           [Populus trichocarpa]
          Length = 161

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/97 (61%), Positives = 66/97 (68%), Gaps = 13/97 (13%)
 Frame = -1

Query: 324 FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKMKPPCLGGVEGFPEGCLYDD 145
           FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK KPP  GG  G+ E CL+D 
Sbjct: 55  FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPGRGGPGGYSEECLFDG 114

Query: 144 VGSRVQPFDM-----------VVEGDY--VFPTKRRR 73
            G  +  F++              G +  VFP KRRR
Sbjct: 115 SGGVIHQFELDGVVLEELHLATTHGGFRQVFPVKRRR 151


>ref|XP_002266522.2| PREDICTED: dof zinc finger protein DOF1.5-like [Vitis vinifera]
          Length = 159

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/93 (68%), Positives = 68/93 (73%), Gaps = 9/93 (9%)
 Frame = -1

Query: 324 FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKMKPPCLGGVEGFPEGCLYDD 145
           FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK KPPC  GV GF E CL+ D
Sbjct: 60  FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPC-RGVAGFLESCLF-D 117

Query: 144 VGSRVQPFDM---VVEG------DYVFPTKRRR 73
             + V  FD+   VVE        + FP KRRR
Sbjct: 118 ASAGVHQFDLEGVVVEEWHMGGFRHAFPAKRRR 150


>emb|CBI30684.3| unnamed protein product [Vitis vinifera]
          Length = 173

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/93 (68%), Positives = 68/93 (73%), Gaps = 9/93 (9%)
 Frame = -1

Query: 324 FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKMKPPCLGGVEGFPEGCLYDD 145
           FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK KPPC  GV GF E CL+ D
Sbjct: 74  FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPC-RGVAGFLESCLF-D 131

Query: 144 VGSRVQPFDM---VVEG------DYVFPTKRRR 73
             + V  FD+   VVE        + FP KRRR
Sbjct: 132 ASAGVHQFDLEGVVVEEWHMGGFRHAFPAKRRR 164


>ref|XP_002522580.1| hypothetical protein RCOM_1015170 [Ricinus communis]
           gi|223538271|gb|EEF39880.1| hypothetical protein
           RCOM_1015170 [Ricinus communis]
          Length = 148

 Score =  117 bits (294), Expect = 7e-25
 Identities = 62/97 (63%), Positives = 67/97 (69%), Gaps = 13/97 (13%)
 Frame = -1

Query: 324 FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKMKPPCLGGVEGFPEGCLYDD 145
           FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK K P      G P+GCLYD 
Sbjct: 51  FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKLP------GRPDGCLYDG 104

Query: 144 VGSRVQPFDM----VVEG---------DYVFPTKRRR 73
             S V PF++    +VE           +VFP KRRR
Sbjct: 105 -SSGVDPFELDGRVIVEEWQVASHGGFRHVFPVKRRR 140


Top