BLASTX nr result
ID: Cnidium21_contig00014978
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00014978 (510 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putati... 139 2e-31 emb|CBI32274.3| unnamed protein product [Vitis vinifera] 134 8e-30 ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263... 134 8e-30 ref|XP_002304170.1| predicted protein [Populus trichocarpa] gi|2... 132 3e-29 gb|ADE75613.1| unknown [Picea sitchensis] 131 5e-29 >ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putative [Ricinus communis] gi|223540083|gb|EEF41660.1| U1 small nuclear ribonucleoprotein C, putative [Ricinus communis] Length = 206 Score = 139 bits (350), Expect = 2e-31 Identities = 67/102 (65%), Positives = 78/102 (76%), Gaps = 3/102 (2%) Frame = +1 Query: 97 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXXILIDERIKAHLGQ 276 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR LID+RIK HLGQ Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60 Query: 277 AGSYQQQIGAAYNQ---MRPRMALLPTPVMPMHGNPQMPMNS 393 A ++ QQ+GAAYNQ RPR+ +LPTP+MP+ G+ Q+P N+ Sbjct: 61 AAAF-QQVGAAYNQHLLQRPRLPVLPTPMMPIPGSAQLPANT 101 >emb|CBI32274.3| unnamed protein product [Vitis vinifera] Length = 190 Score = 134 bits (337), Expect = 8e-30 Identities = 67/108 (62%), Positives = 76/108 (70%), Gaps = 9/108 (8%) Frame = +1 Query: 97 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXXILIDERIKAHLGQ 276 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR LID+RIK HLGQ Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60 Query: 277 AGSYQQQIGAAYNQ---------MRPRMALLPTPVMPMHGNPQMPMNS 393 ++ QQ+GAAYNQ RPR+ +LPTP MP+ G+ +PMNS Sbjct: 61 TAAF-QQVGAAYNQHLVSFPGNPPRPRLPVLPTPGMPVAGSAPLPMNS 107 >ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263028 [Vitis vinifera] gi|363805533|sp|F6HQ26.1|RU1C_VITVI RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP C; Short=U1-C; Short=U1C Length = 213 Score = 134 bits (337), Expect = 8e-30 Identities = 67/108 (62%), Positives = 76/108 (70%), Gaps = 9/108 (8%) Frame = +1 Query: 97 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXXILIDERIKAHLGQ 276 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR LID+RIK HLGQ Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60 Query: 277 AGSYQQQIGAAYNQ---------MRPRMALLPTPVMPMHGNPQMPMNS 393 ++ QQ+GAAYNQ RPR+ +LPTP MP+ G+ +PMNS Sbjct: 61 TAAF-QQVGAAYNQHLVSFPGNPPRPRLPVLPTPGMPVAGSAPLPMNS 107 >ref|XP_002304170.1| predicted protein [Populus trichocarpa] gi|222841602|gb|EEE79149.1| predicted protein [Populus trichocarpa] Length = 202 Score = 132 bits (332), Expect = 3e-29 Identities = 64/96 (66%), Positives = 72/96 (75%), Gaps = 4/96 (4%) Frame = +1 Query: 97 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXXILIDERIKAHLGQ 276 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR +ID+RIK HLGQ Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSIIDQRIKEHLGQ 60 Query: 277 AGSYQQQIGAAYNQ----MRPRMALLPTPVMPMHGN 372 ++ QQ+GAAYNQ RPR+ +LPTPVMP+ GN Sbjct: 61 TAAF-QQVGAAYNQHLMVQRPRLPVLPTPVMPIGGN 95 >gb|ADE75613.1| unknown [Picea sitchensis] Length = 244 Score = 131 bits (330), Expect = 5e-29 Identities = 61/105 (58%), Positives = 73/105 (69%), Gaps = 9/105 (8%) Frame = +1 Query: 97 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRXXXXXXXXXXXXILIDERIKAHLGQ 276 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR LID+R+K HLGQ Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQ 60 Query: 277 AGSYQQQIGAAY---------NQMRPRMALLPTPVMPMHGNPQMP 384 ++QQQ+GAA+ Q RPR+ +LP P +P+ G+ Q+P Sbjct: 61 TAAFQQQVGAAFQQHLASMQAGQQRPRIPMLPPPTLPVPGSTQLP 105