BLASTX nr result

ID: Cnidium21_contig00014977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014977
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273586.1| PREDICTED: uncharacterized protein LOC100249...   170   1e-40
ref|XP_002520601.1| RNA binding protein, putative [Ricinus commu...   168   5e-40
ref|XP_004159619.1| PREDICTED: uncharacterized LOC101219150 [Cuc...   166   2e-39
ref|NP_001241952.1| uncharacterized protein LOC100780819 [Glycin...   165   4e-39
ref|XP_002315063.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-38

>ref|XP_002273586.1| PREDICTED: uncharacterized protein LOC100249627 [Vitis vinifera]
           gi|297738257|emb|CBI27458.3| unnamed protein product
           [Vitis vinifera]
          Length = 414

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/102 (80%), Positives = 91/102 (89%), Gaps = 1/102 (0%)
 Frame = -1

Query: 347 GAPSNGSVYVCNLPAGTTEKMLDERFSTIGVIKKNKRTGRPNIWLYRDKVTNEPKGDATV 168
           GAPSNGSVYVCNLP GT E ML E F TIG+IKK+KRTGRP IWLYRDKVTNEPKGDATV
Sbjct: 8   GAPSNGSVYVCNLPHGTDETMLAEYFGTIGLIKKDKRTGRPKIWLYRDKVTNEPKGDATV 67

Query: 167 TYEDPYAASAAVEWFNNKEFHGATIGVCMAESK-KDDNSYSA 45
           TYEDP+AA AAVEWFNNK+FHG+ IGV +AESK KDD+SY++
Sbjct: 68  TYEDPHAALAAVEWFNNKDFHGSIIGVFIAESKNKDDHSYNS 109


>ref|XP_002520601.1| RNA binding protein, putative [Ricinus communis]
           gi|223540200|gb|EEF41774.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 483

 Score =  168 bits (425), Expect = 5e-40
 Identities = 82/117 (70%), Positives = 96/117 (82%), Gaps = 1/117 (0%)
 Frame = -1

Query: 350 KGAPSNGSVYVCNLPAGTTEKMLDERFSTIGVIKKNKRTGRPNIWLYRDKVTNEPKGDAT 171
           KGA +NGSVYVCNLP GT E ML E F TIG++KK+KRTGRP IWLYRDK+TNEPKGDAT
Sbjct: 8   KGASANGSVYVCNLPQGTDEDMLAEYFGTIGLLKKDKRTGRPKIWLYRDKLTNEPKGDAT 67

Query: 170 VTYEDPYAASAAVEWFNNKEFHGATIGVCMAESK-KDDNSYSAVIPAEGPILGGDFG 3
           VTYEDP+AA AA+EWFNNK+FHG  IGV MAESK KD+++Y++ +    P   GDFG
Sbjct: 68  VTYEDPHAAQAAIEWFNNKDFHGNLIGVFMAESKNKDEHAYNSEV---DPNAVGDFG 121


>ref|XP_004159619.1| PREDICTED: uncharacterized LOC101219150 [Cucumis sativus]
          Length = 396

 Score =  166 bits (419), Expect = 2e-39
 Identities = 84/119 (70%), Positives = 96/119 (80%), Gaps = 3/119 (2%)
 Frame = -1

Query: 350 KGAPSNGSVYVCNLPAGTTEKMLDERFSTIGVIKKNKRTGRPNIWLYRDKVTNEPKGDAT 171
           KGAPSNGS+Y+CNLP GT E ML E F TIGV+KK+KRTGRP IWLYRDK TNEPKGDAT
Sbjct: 7   KGAPSNGSIYICNLPYGTDENMLAEYFGTIGVLKKDKRTGRPKIWLYRDKSTNEPKGDAT 66

Query: 170 VTYEDPYAASAAVEWFNNKEFHGATIGVCMAESK-KDDNSYSAVIPAEGPIL--GGDFG 3
           VTYEDP+AA AAVEWFNNK+FHG+ I V +AESK KDD S++ V+    PI+  G D G
Sbjct: 67  VTYEDPHAALAAVEWFNNKDFHGSIIEVHIAESKSKDDLSFNVVV---DPIVAAGDDIG 122


>ref|NP_001241952.1| uncharacterized protein LOC100780819 [Glycine max]
           gi|255646988|gb|ACU23963.1| unknown [Glycine max]
          Length = 365

 Score =  165 bits (417), Expect = 4e-39
 Identities = 79/103 (76%), Positives = 88/103 (85%), Gaps = 1/103 (0%)
 Frame = -1

Query: 344 APSNGSVYVCNLPAGTTEKMLDERFSTIGVIKKNKRTGRPNIWLYRDKVTNEPKGDATVT 165
           APSNGS YVCNLP GT + ML E F TIG+IKK+KRTGRP IWLYRDK TNEPKGDATVT
Sbjct: 9   APSNGSAYVCNLPYGTDDNMLAEYFGTIGLIKKDKRTGRPKIWLYRDKETNEPKGDATVT 68

Query: 164 YEDPYAASAAVEWFNNKEFHGATIGVCMAESK-KDDNSYSAVI 39
           YEDP+AA AAVEWFNNK+FHG TIGV +AESK KDD +Y+A +
Sbjct: 69  YEDPHAAVAAVEWFNNKDFHGNTIGVFIAESKNKDDQAYNAAV 111


>ref|XP_002315063.1| predicted protein [Populus trichocarpa] gi|222864103|gb|EEF01234.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  162 bits (411), Expect = 2e-38
 Identities = 76/104 (73%), Positives = 90/104 (86%), Gaps = 1/104 (0%)
 Frame = -1

Query: 350 KGAPSNGSVYVCNLPAGTTEKMLDERFSTIGVIKKNKRTGRPNIWLYRDKVTNEPKGDAT 171
           KGAPSNG++YV NLP GT + ML E F TIG++KK+KRTGRP IWLYRDK+TNEPKGDAT
Sbjct: 7   KGAPSNGTIYVSNLPEGTDDSMLAEHFGTIGLLKKDKRTGRPKIWLYRDKMTNEPKGDAT 66

Query: 170 VTYEDPYAASAAVEWFNNKEFHGATIGVCMAESK-KDDNSYSAV 42
           VTYEDP+AA AAVEWFNNK+FHG TIGV +A+SK KDD +++ V
Sbjct: 67  VTYEDPHAALAAVEWFNNKDFHGNTIGVFIAQSKSKDDQAFNPV 110


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