BLASTX nr result

ID: Cnidium21_contig00014976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014976
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|2...   283   6e-74
ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [...   280   4e-73
ref|NP_974275.1| reticulon-like protein B16 [Arabidopsis thalian...   257   3e-66
ref|NP_001078133.1| reticulon-like protein B16 [Arabidopsis thal...   253   6e-65
ref|XP_004138395.1| PREDICTED: reticulon-like protein B16-like [...   250   3e-64

>ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|222862357|gb|EEE99863.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  283 bits (723), Expect = 6e-74
 Identities = 142/204 (69%), Positives = 166/204 (81%)
 Frame = +1

Query: 253 YRLFGRQTTIHQMMGGGRAADVMLWKRQYVSSAILLVATVAWLLFERAGLSFLTISSDXX 432
           YRLF RQ ++HQ+MG G+AADV+LWK  +VS  +++VATV+W +FER+GL FLTI SD  
Sbjct: 41  YRLFDRQDSLHQLMGAGKAADVLLWKWWHVSFGVIMVATVSWFIFERSGLPFLTICSDVL 100

Query: 433 XXXXXXXXXRANYAEFRNLHLQSLPELVLSEEMVNNVAASFRVKINYVLLMAHDITLGKD 612
                    RAN A+  N  LQSLPELVLSEEMVN+ AASFRVKIN VLLMAHDITLGKD
Sbjct: 101 LILIVLLFVRANIADMINKQLQSLPELVLSEEMVNSAAASFRVKINNVLLMAHDITLGKD 160

Query: 613 FRLFFKVVVVLWLMSVTGSYISFFTLAYIGTIIAITVPALYNRYEQKVDRYAGFIQQKLS 792
           FRLFFKVVV LWL+S  GSY SFFTLAYIGTI++IT+PALY+RYE++VDR  G I +KLS
Sbjct: 161 FRLFFKVVVFLWLLSTVGSYFSFFTLAYIGTILSITIPALYSRYEERVDRCCGIIHRKLS 220

Query: 793 RHYKIVDDSMISRIPQSLSKVKDS 864
            HYKIVD+S+ISRIPQSLSK KDS
Sbjct: 221 HHYKIVDESVISRIPQSLSKDKDS 244


>ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [Vitis vinifera]
           gi|297736488|emb|CBI25359.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  280 bits (716), Expect = 4e-73
 Identities = 139/204 (68%), Positives = 169/204 (82%)
 Frame = +1

Query: 253 YRLFGRQTTIHQMMGGGRAADVMLWKRQYVSSAILLVATVAWLLFERAGLSFLTISSDXX 432
           YRLF R+++IHQ+MGGG+AADV+LWKR+ VS   ++VATVAW+LFER+GLSFL+I SD  
Sbjct: 24  YRLFDRRSSIHQIMGGGKAADVLLWKRRRVSCGTIVVATVAWILFERSGLSFLSICSDVL 83

Query: 433 XXXXXXXXXRANYAEFRNLHLQSLPELVLSEEMVNNVAASFRVKINYVLLMAHDITLGKD 612
                    RANYA FRN  L+SLPEL LSEEMVN+VA SFRVKINY+LLMAHDITLGKD
Sbjct: 84  LILIVVLFLRANYAAFRNKQLKSLPELELSEEMVNSVAGSFRVKINYLLLMAHDITLGKD 143

Query: 613 FRLFFKVVVVLWLMSVTGSYISFFTLAYIGTIIAITVPALYNRYEQKVDRYAGFIQQKLS 792
           FRLFFKVV+ LWL+SV GS  SFFTLAYIGTII+ITVPALY++YE+ VD+Y G I +K S
Sbjct: 144 FRLFFKVVLGLWLLSVVGSSFSFFTLAYIGTIISITVPALYSKYEEHVDKYFGIIHRKFS 203

Query: 793 RHYKIVDDSMISRIPQSLSKVKDS 864
           +HYK+VD+++I RIP  LSK K++
Sbjct: 204 KHYKLVDENVIRRIPPGLSKDKET 227


>ref|NP_974275.1| reticulon-like protein B16 [Arabidopsis thaliana]
           gi|75151434|sp|Q8GYH6.1|RTNLP_ARATH RecName:
           Full=Reticulon-like protein B16; Short=AtRTNLB16
           gi|26450318|dbj|BAC42275.1| unknown protein [Arabidopsis
           thaliana] gi|28827594|gb|AAO50641.1| unknown protein
           [Arabidopsis thaliana] gi|332641451|gb|AEE74972.1|
           reticulon-like protein B16 [Arabidopsis thaliana]
          Length = 226

 Score =  257 bits (657), Expect = 3e-66
 Identities = 120/204 (58%), Positives = 162/204 (79%)
 Frame = +1

Query: 253 YRLFGRQTTIHQMMGGGRAADVMLWKRQYVSSAILLVATVAWLLFERAGLSFLTISSDXX 432
           YRL GRQ T+HQ MGGG+AAD++LW+R+++S  +++++TVAWL+FE +GL FL++SSD  
Sbjct: 23  YRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVL 82

Query: 433 XXXXXXXXXRANYAEFRNLHLQSLPELVLSEEMVNNVAASFRVKINYVLLMAHDITLGKD 612
                     A  + FRN  L SLPELVLSEEMVN+ AASFR+K+N++L+MAHD+T+G D
Sbjct: 83  LIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGND 142

Query: 613 FRLFFKVVVVLWLMSVTGSYISFFTLAYIGTIIAITVPALYNRYEQKVDRYAGFIQQKLS 792
           FRLFFKVV+ LWL+S  GSYIS  TL YIGTI+++T+PALY++Y+ KVD+  G I ++LS
Sbjct: 143 FRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLS 202

Query: 793 RHYKIVDDSMISRIPQSLSKVKDS 864
            HYKIVD+++ISR+  SLSK KDS
Sbjct: 203 HHYKIVDENVISRLSWSLSKDKDS 226


>ref|NP_001078133.1| reticulon-like protein B16 [Arabidopsis thaliana]
           gi|332641453|gb|AEE74974.1| reticulon-like protein B16
           [Arabidopsis thaliana]
          Length = 227

 Score =  253 bits (645), Expect = 6e-65
 Identities = 120/205 (58%), Positives = 162/205 (79%), Gaps = 1/205 (0%)
 Frame = +1

Query: 253 YRLFGRQTTIHQMMGGGRAADVMLWKRQYVSSAILLVATVAWLLFERAGLSFLTISSDXX 432
           YRL GRQ T+HQ MGGG+AAD++LW+R+++S  +++++TVAWL+FE +GL FL++SSD  
Sbjct: 23  YRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVL 82

Query: 433 XXXXXXXXXRANYAEFRNLHLQSLPELVLSEEMVNNVAASFRVKINYVLLMAHDITLGKD 612
                     A  + FRN  L SLPELVLSEEMVN+ AASFR+K+N++L+MAHD+T+G D
Sbjct: 83  LIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGND 142

Query: 613 FRLFFK-VVVVLWLMSVTGSYISFFTLAYIGTIIAITVPALYNRYEQKVDRYAGFIQQKL 789
           FRLFFK VV+ LWL+S  GSYIS  TL YIGTI+++T+PALY++Y+ KVD+  G I ++L
Sbjct: 143 FRLFFKQVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRL 202

Query: 790 SRHYKIVDDSMISRIPQSLSKVKDS 864
           S HYKIVD+++ISR+  SLSK KDS
Sbjct: 203 SHHYKIVDENVISRLSWSLSKDKDS 227


>ref|XP_004138395.1| PREDICTED: reticulon-like protein B16-like [Cucumis sativus]
           gi|449514721|ref|XP_004164461.1| PREDICTED:
           reticulon-like protein B16-like [Cucumis sativus]
          Length = 224

 Score =  250 bits (639), Expect = 3e-64
 Identities = 118/198 (59%), Positives = 154/198 (77%)
 Frame = +1

Query: 268 RQTTIHQMMGGGRAADVMLWKRQYVSSAILLVATVAWLLFERAGLSFLTISSDXXXXXXX 447
           RQT +HQ MGGG+AAD++LWK+ +VS  +L+V+TV WLL E +GL  LT  SD       
Sbjct: 26  RQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTVFWLLIEHSGLPLLTTCSDVLLILVV 85

Query: 448 XXXXRANYAEFRNLHLQSLPELVLSEEMVNNVAASFRVKINYVLLMAHDITLGKDFRLFF 627
               RAN+A FRN  LQ+LP+LVLSEE VNNVAAS R KIN  LLMAHDIT+G DF+LFF
Sbjct: 86  LLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITVGNDFKLFF 145

Query: 628 KVVVVLWLMSVTGSYISFFTLAYIGTIIAITVPALYNRYEQKVDRYAGFIQQKLSRHYKI 807
           ++V+ LWL+SV GSY+SFFT AY+GTII+IT+PALY++Y++ VDRY G I+Q+  +HY++
Sbjct: 146 RMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPALYSKYDKHVDRYCGMIRQQFRKHYRV 205

Query: 808 VDDSMISRIPQSLSKVKD 861
           +D+S+ SR+P  LSK KD
Sbjct: 206 MDESVFSRLPGGLSKDKD 223


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