BLASTX nr result

ID: Cnidium21_contig00014964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014964
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38318.3| unnamed protein product [Vitis vinifera]              150   4e-34
emb|CAN62662.1| hypothetical protein VITISV_027496 [Vitis vinifera]   146   5e-33
emb|CBI38323.3| unnamed protein product [Vitis vinifera]              143   5e-32
ref|XP_002270580.1| PREDICTED: F-box protein PP2-B10-like [Vitis...   143   5e-32
ref|XP_003638370.1| F-box protein PP2-B1 [Medicago truncatula] g...   142   7e-32

>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  150 bits (378), Expect = 4e-34
 Identities = 104/280 (37%), Positives = 149/280 (53%), Gaps = 15/280 (5%)
 Frame = +1

Query: 1   SPMDACGKLSILSRSFCSAAKSDLVWERFLPAD---IISRRASCDSDYWMSFDDPWEKID 171
           SP D C ++S ++  F SAA+SD +WERFLPAD   II+R  S +S  W  F        
Sbjct: 36  SPRDVC-RMSAVASVFLSAAESDALWERFLPADYREIIAR--SSESSSWRHFS------- 85

Query: 172 SDTLHAFPTKKDLYLFLSDNPLIIDDGDMYFWLDKLSGKKCFHIVPDKLSI--------- 324
                   +KK+LY  L D PL+ID+G   FWL+K SGKKC+ +   +L+I         
Sbjct: 86  --------SKKELYFTLCDYPLLIDEGKKSFWLEKRSGKKCYMLASRELTIIWGDTPGYW 137

Query: 325 ---XXXXXXXXXYSYFHTTVPFEIYGKISTSLLSPNTAYTAYLLFDFTCYLFFKGFGEEQ 495
                        +Y      FEI GKI+T +LSP T Y AYL+F       F    E+ 
Sbjct: 138 EWTSLPESRFPEVAYLQAVCWFEIRGKINTCMLSPRTNYAAYLVFHAGRSHGF----EDV 193

Query: 496 PLETCVWIDDGCKSEKRIVYITNMISIYGVFHVEYVGLRPDMPAPPYPEWRGNGWYEVEL 675
           P+E+ + I  G ++  R++Y+      Y         +R D+   PYP+ R + W+E+EL
Sbjct: 194 PVESSIEI-VGNETTTRVIYLAR----YRKNEEPTSSIRSDL---PYPKKREDSWFEIEL 245

Query: 676 GDYFNKEGSDNRELHMSLSEVKRGIPKGGIALKGIEIRPK 795
           G++F  EG ++ EL ++L EVK G  K G+ ++GIEIRPK
Sbjct: 246 GEFF-IEGGEDTELEITLMEVKAGHWKDGLIVEGIEIRPK 284


>emb|CAN62662.1| hypothetical protein VITISV_027496 [Vitis vinifera]
          Length = 266

 Score =  146 bits (369), Expect = 5e-33
 Identities = 102/268 (38%), Positives = 143/268 (53%), Gaps = 4/268 (1%)
 Frame = +1

Query: 10  DACGKLSILSRSFCSAAKSDLVWERFLPAD---IISRRASCDSDYWMSFDDPWEKIDSDT 180
           DAC ++S +S  F SAA+SD +WE FLPAD   II R +                 +S  
Sbjct: 39  DAC-RMSTVSPEFLSAAESDALWETFLPADYREIIGRSS-----------------ESSA 80

Query: 181 LHAFPTKKDLYLFLSDNPLIIDDGDMYFWLDKLSGKKCFHIVPDKLS-IXXXXXXXXXYS 357
              F +KK+L+  L ++PL+ID G   FWLDK SGKKC+ I   +L+ I          +
Sbjct: 81  RQDFSSKKELFFRLCNSPLLIDGGKKSFWLDKESGKKCYMIAARELTIIWSETPRFTEVA 140

Query: 358 YFHTTVPFEIYGKISTSLLSPNTAYTAYLLFDFTCYLFFKGFGEEQPLETCVWIDDGCKS 537
                  F I GK++T +LSP T Y AYL+F       F GF E+ P+E+ + +  G ++
Sbjct: 141 NLKIVWWFVIKGKMNTCMLSPCTNYAAYLIFQRND--IFDGF-EDNPIESSIGVTGG-ET 196

Query: 538 EKRIVYITNMISIYGVFHVEYVGLRPDMPAPPYPEWRGNGWYEVELGDYFNKEGSDNREL 717
            K+++Y                 L P+    P P  R +GWYEVELG++FN EG ++ EL
Sbjct: 197 AKKVIY-----------------LDPEHDISPNPT-RIDGWYEVELGEFFN-EGRESVEL 237

Query: 718 HMSLSEVKRGIPKGGIALKGIEIRPKSC 801
            MS+ EV   I K G+ ++GIEIRPK C
Sbjct: 238 EMSIMEVNTFIGKSGLLIEGIEIRPKFC 265


>emb|CBI38323.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  143 bits (360), Expect = 5e-32
 Identities = 104/283 (36%), Positives = 145/283 (51%), Gaps = 19/283 (6%)
 Frame = +1

Query: 10  DACGKLSILSRSFCSAAKSDLVWERFLPAD---IISRRASCDSDYWMSFDDPWEKIDSDT 180
           DAC ++S +S  F SAA+SD +WE FLPAD   II R +                 +S  
Sbjct: 73  DAC-RMSTVSPEFLSAAESDALWETFLPADYREIIGRSS-----------------ESSA 114

Query: 181 LHAFPTKKDLYLFLSDNPLIIDDGDMYFWLDKLSGKKCFHIVPDKLSIXXXXXXXXXYSY 360
              F +KK+L+  L ++PL+ID G   FWLDK SGKKC+ I   +L+I           Y
Sbjct: 115 RQDFSSKKELFFRLCNSPLLIDGGKKSFWLDKESGKKCYMIAARELTIIWSETP----RY 170

Query: 361 FHTTVP----------------FEIYGKISTSLLSPNTAYTAYLLFDFTCYLFFKGFGEE 492
           +    P                F I GK++T +LSP T Y AYL+F       F GF E+
Sbjct: 171 WTWISPPQSRFTEVANLKIVWWFVIKGKMNTCMLSPCTNYAAYLIFQRND--IFDGF-ED 227

Query: 493 QPLETCVWIDDGCKSEKRIVYITNMISIYGVFHVEYVGLRPDMPAPPYPEWRGNGWYEVE 672
            P+E+ + +  G ++ K+++Y                 L P+    P P  R +GWYEVE
Sbjct: 228 NPIESSIGVTGG-ETAKKVIY-----------------LDPEHDISPNPT-RIDGWYEVE 268

Query: 673 LGDYFNKEGSDNRELHMSLSEVKRGIPKGGIALKGIEIRPKSC 801
           LG++FN EG ++ EL MS+ EV   I K G+ ++GIEIRPK C
Sbjct: 269 LGEFFN-EGRESVELEMSIMEVNTFIGKSGLLIEGIEIRPKFC 310


>ref|XP_002270580.1| PREDICTED: F-box protein PP2-B10-like [Vitis vinifera]
          Length = 277

 Score =  143 bits (360), Expect = 5e-32
 Identities = 104/283 (36%), Positives = 145/283 (51%), Gaps = 19/283 (6%)
 Frame = +1

Query: 10  DACGKLSILSRSFCSAAKSDLVWERFLPAD---IISRRASCDSDYWMSFDDPWEKIDSDT 180
           DAC ++S +S  F SAA+SD +WE FLPAD   II R +                 +S  
Sbjct: 39  DAC-RMSTVSPEFLSAAESDALWETFLPADYREIIGRSS-----------------ESSA 80

Query: 181 LHAFPTKKDLYLFLSDNPLIIDDGDMYFWLDKLSGKKCFHIVPDKLSIXXXXXXXXXYSY 360
              F +KK+L+  L ++PL+ID G   FWLDK SGKKC+ I   +L+I           Y
Sbjct: 81  RQDFSSKKELFFRLCNSPLLIDGGKKSFWLDKESGKKCYMIAARELTIIWSETP----RY 136

Query: 361 FHTTVP----------------FEIYGKISTSLLSPNTAYTAYLLFDFTCYLFFKGFGEE 492
           +    P                F I GK++T +LSP T Y AYL+F       F GF E+
Sbjct: 137 WTWISPPQSRFTEVANLKIVWWFVIKGKMNTCMLSPCTNYAAYLIFQRND--IFDGF-ED 193

Query: 493 QPLETCVWIDDGCKSEKRIVYITNMISIYGVFHVEYVGLRPDMPAPPYPEWRGNGWYEVE 672
            P+E+ + +  G ++ K+++Y                 L P+    P P  R +GWYEVE
Sbjct: 194 NPIESSIGVTGG-ETAKKVIY-----------------LDPEHDISPNPT-RIDGWYEVE 234

Query: 673 LGDYFNKEGSDNRELHMSLSEVKRGIPKGGIALKGIEIRPKSC 801
           LG++FN EG ++ EL MS+ EV   I K G+ ++GIEIRPK C
Sbjct: 235 LGEFFN-EGRESVELEMSIMEVNTFIGKSGLLIEGIEIRPKFC 276


>ref|XP_003638370.1| F-box protein PP2-B1 [Medicago truncatula]
           gi|355504305|gb|AES85508.1| F-box protein PP2-B1
           [Medicago truncatula]
          Length = 275

 Score =  142 bits (359), Expect = 7e-32
 Identities = 98/281 (34%), Positives = 138/281 (49%), Gaps = 16/281 (5%)
 Frame = +1

Query: 1   SPMDACGKLSILSRSFCSAAKSDLVWERFLPADIISRRASCDSDYWMSFDDPWEKIDSDT 180
           +P+DA G+LS++S++F SAA SD VW  FLP+D+ S  +                  S +
Sbjct: 20  TPVDA-GRLSVVSKTFLSAADSDAVWNHFLPSDVNSIISQ-----------------SPS 61

Query: 181 LHAFPTKKDLYLFLSDNPLIIDDGDMYFWLDKLSGKKCFHIVPDKLSIXXXXXXXXXYSY 360
           L   P+KK LYL LSD P+IIDD    F LD+ SGKKC+ +    L I           +
Sbjct: 62  LANAPSKKALYLTLSDRPIIIDDAKKSFQLDRKSGKKCYMLAARSLHIIWGDDDRY---W 118

Query: 361 FHTTVP---------------FEIYGKISTSLLSPNTAYTAYLLFDFTCYLFFKGFG-EE 492
             T +P                EI G I+   LSPNT Y AYL+F         G+G E 
Sbjct: 119 IWTAMPDSRFPEVANLRLVWWLEIRGMINNLALSPNTQYAAYLVFK-----LIDGYGFET 173

Query: 493 QPLETCVWIDDGCKSEKRIVYITNMISIYGVFHVEYVGLRPDMPAPPYPEWRGNGWYEVE 672
            P++  V ++ G  S K +    N+       H  + G    +   P P  R +GW E+E
Sbjct: 174 LPVDLSVGVEGGHSSTKIVCLDPNVERRQNSRHARFYGRADRVVGLPRPGVRSDGWLEIE 233

Query: 673 LGDYFNKEGSDNRELHMSLSEVKRGIPKGGIALKGIEIRPK 795
           +G++    G +N E+ MS+ E+K G  KG   L+GIE+RPK
Sbjct: 234 MGEF--NSGLENEEVQMSVIEIKAGETKGNFFLEGIEVRPK 272


Top