BLASTX nr result

ID: Cnidium21_contig00014957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014957
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633737.1| PREDICTED: uncharacterized protein LOC100853...   101   8e-20
ref|XP_002531186.1| transcription regulator, putative [Ricinus c...    82   5e-14
ref|XP_002305861.1| predicted protein [Populus trichocarpa] gi|2...    59   8e-07
ref|XP_003560789.1| PREDICTED: uncharacterized protein LOC100845...    57   2e-06

>ref|XP_003633737.1| PREDICTED: uncharacterized protein LOC100853960 [Vitis vinifera]
          Length = 344

 Score =  101 bits (252), Expect = 8e-20
 Identities = 70/212 (33%), Positives = 102/212 (48%), Gaps = 43/212 (20%)
 Frame = +3

Query: 3   RKKWRVVSTRLSKGLDLNRLSPHDKMLFELSEKLWHPNYANTSPF--------------- 137
           RKK+RV+S RL++GL   +LSPHD+ LF+LS++LWHP+Y++ SPF               
Sbjct: 131 RKKFRVISARLARGLHPAQLSPHDRALFDLSKRLWHPDYSSASPFNNNLSNICGKKSKST 190

Query: 138 ------GASTTTP-NLITRKISTVDVNXXXXXXXXXXXXXXXENCCVDDVK--------- 269
                   S T P N  + +    + N               +N  VD V          
Sbjct: 191 LVGVKVSFSPTLPLNSASHQTHLSNWNEDYILDSTDDGDDNGDNAKVDKVDGIVDVDVVN 250

Query: 270 -------LEEKLSDSGNEIGKIVAKTVVDVFDESLK-----FVKSGKRFCYGGGGEGQCE 413
                   +EK S     IG + AKTV+DVFD+SLK      V+ G          G   
Sbjct: 251 LESPNLGTQEKESGDTGGIGGLAAKTVIDVFDQSLKEVSMVLVRRGILCPDSKSAPGNAM 310

Query: 414 SFDKRWRELRVVEMEVLAQRLRLVVEDSIMKR 509
            F+ +WR+ RV E++V A+RLRLV+++S+ +R
Sbjct: 311 DFENKWRQQRVAELDVFARRLRLVLQNSLGQR 342


>ref|XP_002531186.1| transcription regulator, putative [Ricinus communis]
           gi|223529227|gb|EEF31201.1| transcription regulator,
           putative [Ricinus communis]
          Length = 286

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
 Frame = +3

Query: 3   RKKWRVVSTRLSKGLDLNRLSPHDKMLFELSEKLWHPNYANTSPFGASTTTPNLITRKIS 182
           RKK+R +S+R+S+GLD N LSPHD++LF+LS KLW P   +     + +        +++
Sbjct: 129 RKKFRAISSRISRGLDPNLLSPHDRVLFDLSRKLWSPKDNSKMNSNSGSNISIEYAERVN 188

Query: 183 TVDVNXXXXXXXXXXXXXXXENCCVDDVKLEEKLS-DSGNEIGKIVAKTVVDVFDESLKF 359
            V V                 N  +  + L++    D   E   +VAK VV VFDE +K 
Sbjct: 189 LVGVQ----VDFSPVLPPFNNNNDLQPLDLDDSNDVDVAAEKASVVAKGVVKVFDECIK- 243

Query: 360 VKSGKRFCYGGGGEGQCESFDKRWRELRVVEMEVLAQRLRLVVEDSI 500
               +  C     +     F+++WRE +  EM+V  +RLRL++E S+
Sbjct: 244 ---ERLRCMAVDDK---NDFERKWREQKAAEMDVFGRRLRLLLEGSV 284


>ref|XP_002305861.1| predicted protein [Populus trichocarpa] gi|222848825|gb|EEE86372.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 26/52 (50%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
 Frame = +3

Query: 3   RKKWRVVSTRLSK-GLDLNRLSPHDKMLFELSEKLWHPNYANTSPFGASTTT 155
           RKK+R  S+RL++ G + + LSPHD+ LF+LS++LW P +A++SPFG + +T
Sbjct: 133 RKKFRSTSSRLARNGFNYSLLSPHDRSLFDLSKQLWSPEFASSSPFGGNKST 184


>ref|XP_003560789.1| PREDICTED: uncharacterized protein LOC100845859 [Brachypodium
           distachyon]
          Length = 372

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/64 (43%), Positives = 41/64 (64%)
 Frame = +3

Query: 3   RKKWRVVSTRLSKGLDLNRLSPHDKMLFELSEKLWHPNYANTSPFGASTTTPNLITRKIS 182
           + K R VSTR+++GLD  RL+PHD+ +  L  +LW P  A TSPF AS  +P    R+ +
Sbjct: 137 KNKHRNVSTRVARGLDPARLAPHDRDVLHLCSRLWDPANAATSPFAASAGSPGNKRRRAA 196

Query: 183 TVDV 194
            ++V
Sbjct: 197 PLEV 200


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