BLASTX nr result

ID: Cnidium21_contig00014912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014912
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531582.1| serine/arginine rich splicing factor, putati...   108   1e-21
gb|ACL54818.1| unknown [Zea mays] gi|414887750|tpg|DAA63764.1| T...   105   6e-21
ref|NP_001151991.1| LOC100285628 [Zea mays] gi|195651649|gb|ACG4...   105   6e-21
gb|ACG36660.1| splicing factor, arginine/serine-rich 4 [Zea mays...   105   6e-21
gb|ACF78384.1| unknown [Zea mays] gi|194700100|gb|ACF84134.1| un...   105   6e-21

>ref|XP_002531582.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223528778|gb|EEF30785.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 216

 Score =  108 bits (269), Expect = 1e-21
 Identities = 50/60 (83%), Positives = 55/60 (91%)
 Frame = +3

Query: 3   EPRGFGFVQYVHPADAEEAKYHMDGQVFLGRELTVVFAEENRKKPQEMRARDRVRSRSYD 182
           EPRGFGFVQYV PADA +AK+HMDG++ LGRELTVVFAEENRKKP EMRAR+RVR RSYD
Sbjct: 79  EPRGFGFVQYVDPADAADAKHHMDGEILLGRELTVVFAEENRKKPAEMRARERVRGRSYD 138


>gb|ACL54818.1| unknown [Zea mays] gi|414887750|tpg|DAA63764.1| TPA: splicing
           factor, arginine/serine-rich 4 [Zea mays]
          Length = 138

 Score =  105 bits (263), Expect = 6e-21
 Identities = 49/60 (81%), Positives = 54/60 (90%)
 Frame = +3

Query: 3   EPRGFGFVQYVHPADAEEAKYHMDGQVFLGRELTVVFAEENRKKPQEMRARDRVRSRSYD 182
           +PRGFGFVQY  PADA +AKY+MDGQV LGR++TVVFAEENRKKPQEMRARDRVR  SYD
Sbjct: 5   DPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVFAEENRKKPQEMRARDRVRGHSYD 64


>ref|NP_001151991.1| LOC100285628 [Zea mays] gi|195651649|gb|ACG45292.1| splicing
           factor, arginine/serine-rich 4 [Zea mays]
           gi|448878242|gb|AGE46084.1| arginine/serine-rich
           splicing factor SCL25B transcript I [Zea mays]
           gi|448878246|gb|AGE46086.1| arginine/serine-rich
           splicing factor SCL25B transcript III [Zea mays]
           gi|448878250|gb|AGE46088.1| arginine/serine-rich
           splicing factor SCL25B transcript V [Zea mays]
           gi|448878254|gb|AGE46090.1| arginine/serine-rich
           splicing factor SCL25B transcript VII [Zea mays]
           gi|448878256|gb|AGE46091.1| arginine/serine-rich
           splicing factor SCL25B transcript VIII [Zea mays]
          Length = 209

 Score =  105 bits (263), Expect = 6e-21
 Identities = 49/60 (81%), Positives = 54/60 (90%)
 Frame = +3

Query: 3   EPRGFGFVQYVHPADAEEAKYHMDGQVFLGRELTVVFAEENRKKPQEMRARDRVRSRSYD 182
           +PRGFGFVQY  PADA +AKY+MDGQV LGR++TVVFAEENRKKPQEMRARDRVR  SYD
Sbjct: 76  DPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVFAEENRKKPQEMRARDRVRGHSYD 135


>gb|ACG36660.1| splicing factor, arginine/serine-rich 4 [Zea mays]
           gi|195642888|gb|ACG40912.1| splicing factor,
           arginine/serine-rich 4 [Zea mays]
           gi|195645762|gb|ACG42349.1| splicing factor,
           arginine/serine-rich 4 [Zea mays]
          Length = 209

 Score =  105 bits (263), Expect = 6e-21
 Identities = 49/60 (81%), Positives = 54/60 (90%)
 Frame = +3

Query: 3   EPRGFGFVQYVHPADAEEAKYHMDGQVFLGRELTVVFAEENRKKPQEMRARDRVRSRSYD 182
           +PRGFGFVQY  PADA +AKY+MDGQV LGR++TVVFAEENRKKPQEMRARDRVR  SYD
Sbjct: 76  DPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVFAEENRKKPQEMRARDRVRGHSYD 135


>gb|ACF78384.1| unknown [Zea mays] gi|194700100|gb|ACF84134.1| unknown [Zea mays]
           gi|219887871|gb|ACL54310.1| unknown [Zea mays]
           gi|224035011|gb|ACN36581.1| unknown [Zea mays]
           gi|238908719|gb|ACF81490.2| unknown [Zea mays]
           gi|448878248|gb|AGE46087.1| arginine/serine-rich
           splicing factor SCL25B transcript IV [Zea mays]
          Length = 209

 Score =  105 bits (263), Expect = 6e-21
 Identities = 49/60 (81%), Positives = 54/60 (90%)
 Frame = +3

Query: 3   EPRGFGFVQYVHPADAEEAKYHMDGQVFLGRELTVVFAEENRKKPQEMRARDRVRSRSYD 182
           +PRGFGFVQY  PADA +AKY+MDGQV LGR++TVVFAEENRKKPQEMRARDRVR  SYD
Sbjct: 76  DPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVFAEENRKKPQEMRARDRVRGHSYD 135


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