BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014896
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                57   2e-06
dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like ...    57   2e-06
gb|ABE65413.1| hypothetical protein At1g62890 [Arabidopsis thali...    55   8e-06
gb|ABK28152.1| unknown [Arabidopsis thaliana]                          55   8e-06

>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
 Frame = -3

Query: 427  HCYLCVGGTEDAHHLFISCSYSRFILEQFLLGTTMGLAVDFNLIWSDLLVFVVSLNDDTQ 248
            +C LC   ++   HLF SCSY+  +      G        ++  WS LL  + +   D  
Sbjct: 746  NCVLCTNNSKTLEHLFFSCSYASTVWAALAKGIWK---TRYSTRWSHLLTHISTHFQDRV 802

Query: 247  KQVILLFL-QIFAYHVWRERNSRAHDKGVSNPAVLL 143
            +  +  ++ Q   YHVWRERN R HD   + PA ++
Sbjct: 803  EGFLTRYIFQATIYHVWRERNGRRHDAAPNTPATVI 838


>dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana] gi|93007380|gb|ABE97193.1|
           hypothetical protein At5g13655 [Arabidopsis thaliana]
          Length = 385

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
 Frame = -3

Query: 436 THTHCYLCVGGTEDAHHLFISCSYSRFILEQFLLGTTMGLAVD-FNLIWSDLLVFVVSLN 260
           T T C  C    E   HLF  C Y+R +      G   GL +D ++  W D+++ +   +
Sbjct: 254 TDTSCIFCKNPNETREHLFFQCVYTRKVWN----GLIKGLLLDKYSDRWQDIILMLTRKD 309

Query: 259 DDTQKQVILLF-LQIFAYHVWRERNSRAHDKGVSNPAVLLHGIMVDLSSRVHS------- 104
            DT K  IL + LQ   + +WRER+ R H +  SN   L+  I  ++ +R+ +       
Sbjct: 310 FDTTKSFILGYVLQNSIHSIWRERDDRRHGEDPSNEERLIKFIDKNIRNRLSTLRRGDEE 369

Query: 103 ------NIWFSKR 83
                  +WF  R
Sbjct: 370 KYVNGIQVWFGSR 382


>gb|ABE65413.1| hypothetical protein At1g62890 [Arabidopsis thaliana]
          Length = 195

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 16/130 (12%)
 Frame = -3

Query: 424 CYLCVGGTEDAHHLFISCSYSRFILEQFLLGTTMGLAVDFNLIWSDLLVFVVSLNDDTQK 245
           C LC    E  + LF SC Y+  +       T   L+ D++  W+ LL  + + N  T  
Sbjct: 63  CTLCGNAEETRNLLFFSCHYTSEVWRTL---TQRLLSNDYSRDWNRLLPLLCNTNMPTD- 118

Query: 244 QVILLFLQIF---AYHVWRERNSRAHDKGVSNPAVLLHGIMVDLSSRVHS---------- 104
            ++ LF  +F    YH+WRERN+R H +  S P  L+  I  ++ +R++S          
Sbjct: 119 -LLFLFRYVFQASVYHIWRERNARRHGEISSPPNRLIKFIDKNVRNRINSIRDTGDHNYN 177

Query: 103 ---NIWFSKR 83
               +WFS R
Sbjct: 178 ACLQLWFSTR 187


>gb|ABK28152.1| unknown [Arabidopsis thaliana]
          Length = 196

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 16/130 (12%)
 Frame = -3

Query: 424 CYLCVGGTEDAHHLFISCSYSRFILEQFLLGTTMGLAVDFNLIWSDLLVFVVSLNDDTQK 245
           C LC    E  + LF SC Y+  +       T   L+ D++  W+ LL  + + N  T  
Sbjct: 63  CTLCGNAEETRNLLFFSCHYTSEVWRTL---TQRLLSNDYSRDWNRLLPLLCNTNMPTD- 118

Query: 244 QVILLFLQIF---AYHVWRERNSRAHDKGVSNPAVLLHGIMVDLSSRVHS---------- 104
            ++ LF  +F    YH+WRERN+R H +  S P  L+  I  ++ +R++S          
Sbjct: 119 -LLFLFRYVFQASVYHIWRERNARRHGEISSPPNRLIKFIDKNVRNRINSIRDTGDHNYN 177

Query: 103 ---NIWFSKR 83
               +WFS R
Sbjct: 178 ACLQLWFSTR 187